mRNA_H-paniculata_contig51666.12497.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig51666.12497.1 vs. uniprot
Match: A0A6H5K2T4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2T4_9PHAE) HSP 1 Score: 82.0 bits (201), Expect = 1.690e-16 Identity = 36/71 (50.70%), Postives = 48/71 (67.61%), Query Frame = 1
Query: 1 YGKNKQGYWNYDKFAEQVQDLLDFYEMLLPNHQAVLEVDHSSGHAKGREGGLRVNGRILNYVGMPEKLRET 213
YGKNK GYW YD+F EQ++D LD ++ P+ Q V+E+DHSSGH + RE GL V + Y G + LR+T
Sbjct: 693 YGKNKDGYWGYDEFKEQMEDALDVLDVFEPDMQVVVEIDHSSGHTRQREDGLHVGNMNVKYGGKQKVLRDT 763
BLAST of mRNA_H-paniculata_contig51666.12497.1 vs. uniprot
Match: A0A6H5KXL0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXL0_9PHAE) HSP 1 Score: 81.3 bits (199), Expect = 3.120e-16 Identity = 37/76 (48.68%), Postives = 51/76 (67.11%), Query Frame = 1
Query: 1 YGKNKQGYWNYDKFAEQVQDLLDFYEMLLPNHQAVLEVDHSSGHAKGREGGLRVNGRILNYVGMPEKLRETGVCKD 228
YGK K GYW YD+F EQV+D++D E + P+ Q V EVDHSSGH K RE GL V+ + Y G + LR++ + ++
Sbjct: 353 YGKGKDGYWGYDQFEEQVEDVMDVLEHIDPDMQIVFEVDHSSGHGKQREDGLHVSNMNVKYGGKQKVLRDSVMTEE 428
BLAST of mRNA_H-paniculata_contig51666.12497.1 vs. uniprot
Match: A0A6H5JMQ7_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMQ7_9PHAE) HSP 1 Score: 79.7 bits (195), Expect = 1.090e-15 Identity = 37/69 (53.62%), Postives = 46/69 (66.67%), Query Frame = 1
Query: 1 YGKNKQGYWNYDKFAEQVQDLLDFYEMLLPNHQAVLEVDHSSGHAKGREGGLRVNGRILNYVGMPEKLR 207
YGK K GYW YD+F EQV+D++D E + P+ Q V EVDHSSGH K RE GL V+ + Y G + LR
Sbjct: 567 YGKGKDGYWGYDQFEEQVEDVMDVLEHIDPDMQIVFEVDHSSGHGKQREDGLHVSNMNVKYGGKQKVLR 635
BLAST of mRNA_H-paniculata_contig51666.12497.1 vs. uniprot
Match: A0A6H5KQB9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQB9_9PHAE) HSP 1 Score: 79.3 bits (194), Expect = 1.470e-15 Identity = 37/71 (52.11%), Postives = 47/71 (66.20%), Query Frame = 1
Query: 1 YGKNKQGYWNYDKFAEQVQDLLDFYEMLLPNHQAVLEVDHSSGHAKGREGGLRVNGRILNYVGMPEKLRET 213
YGK K GYW YD F EQV+D++D E + P+ Q V EVDHSSGH K RE GL V+ + Y G + LR++
Sbjct: 198 YGKGKDGYWGYDLFEEQVEDVVDVLEHIDPDMQIVFEVDHSSGHGKQREDGLHVSNMNVKYGGKQKVLRDS 268
BLAST of mRNA_H-paniculata_contig51666.12497.1 vs. uniprot
Match: A0A6H5L6Y6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6Y6_9PHAE) HSP 1 Score: 79.3 bits (194), Expect = 1.480e-15 Identity = 35/71 (49.30%), Postives = 49/71 (69.01%), Query Frame = 1
Query: 1 YGKNKQGYWNYDKFAEQVQDLLDFYEMLLPNHQAVLEVDHSSGHAKGREGGLRVNGRILNYVGMPEKLRET 213
YGK K+GYW YD+F EQV+D++D E + P+ Q V EVDH+SGH K RE GL ++ + Y G + LR++
Sbjct: 447 YGKGKEGYWGYDQFEEQVEDVMDVLEHIDPDMQVVFEVDHASGHGKQREDGLYLSNMNVKYEGKQKVLRDS 517
BLAST of mRNA_H-paniculata_contig51666.12497.1 vs. uniprot
Match: A0A6H5JVH4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVH4_9PHAE) HSP 1 Score: 75.5 bits (184), Expect = 2.700e-14 Identity = 34/74 (45.95%), Postives = 49/74 (66.22%), Query Frame = 1
Query: 7 KNKQGYWNYDKFAEQVQDLLDFYEMLLPNHQAVLEVDHSSGHAKGREGGLRVNGRILNYVGMPEKLRETGVCKD 228
+ K GYW YD+F EQV+D++D E + P+ Q V EVDHSSGH K RE GL V+ + Y G + LR++ + ++
Sbjct: 65 RGKDGYWGYDQFEEQVEDVMDVLEHIDPDMQIVFEVDHSSGHGKQREDGLHVSNMNVKYGGKQKVLRDSVMTEE 138
BLAST of mRNA_H-paniculata_contig51666.12497.1 vs. uniprot
Match: A0A6H5J4M4_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J4M4_9PHAE) HSP 1 Score: 75.5 bits (184), Expect = 3.420e-14 Identity = 32/72 (44.44%), Postives = 45/72 (62.50%), Query Frame = 1
Query: 1 YGKNKQGYWNYDKFAEQVQDLLDFYEMLLPNHQAVLEVDHSSGHAKGREGGLRVNGRILNYVGMPEKLRETG 216
YG NK GYW YD+F EQ++D+LD ++ P+ Q V+E+DHSSGH + RE GL + Y G + + G
Sbjct: 862 YGTNKDGYWGYDEFKEQIEDVLDVFDDFEPDMQVVVEIDHSSGHTRQREDGLHAGNMNVKYGGKQKGVHRGG 933
BLAST of mRNA_H-paniculata_contig51666.12497.1 vs. uniprot
Match: A0A6H5KJF8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJF8_9PHAE) HSP 1 Score: 74.7 bits (182), Expect = 4.280e-14 Identity = 34/72 (47.22%), Postives = 48/72 (66.67%), Query Frame = 1
Query: 13 KQGYWNYDKFAEQVQDLLDFYEMLLPNHQAVLEVDHSSGHAKGREGGLRVNGRILNYVGMPEKLRETGVCKD 228
K GYW YD+F EQV+D++D E + P+ Q V EVDHSSGH K RE GL V+ + Y G + LR++ + ++
Sbjct: 93 KDGYWGYDQFEEQVEDVMDVLEHIDPDMQIVFEVDHSSGHGKQREDGLHVSNMNVKYGGKQKVLRDSVMTEE 164
BLAST of mRNA_H-paniculata_contig51666.12497.1 vs. uniprot
Match: A0A6H5JUX8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUX8_9PHAE) HSP 1 Score: 73.2 bits (178), Expect = 2.190e-13 Identity = 33/71 (46.48%), Postives = 43/71 (60.56%), Query Frame = 1
Query: 1 YGKNKQGYWNYDKFAEQVQDLLDFYEMLLPNHQAVLEVDHSSGHAKGREGGLRVNGRILNYVGMPEKLRET 213
YGKNK GYW YD+F EQ+ + P+ Q V+E+DHSSGH + RE GL V + Y G + LR+T
Sbjct: 542 YGKNKDGYWGYDEFKEQIXXXXXXXXVFEPDMQVVVEIDHSSGHTRQREDGLHVGNMNVKYGGKQKVLRDT 612
BLAST of mRNA_H-paniculata_contig51666.12497.1 vs. uniprot
Match: A0A6H5JVN6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVN6_9PHAE) HSP 1 Score: 68.9 bits (167), Expect = 6.830e-12 Identity = 32/71 (45.07%), Postives = 41/71 (57.75%), Query Frame = 1
Query: 1 YGKNKQGYWNYDKFAEQVQDLLDFYEMLLPNHQAVLEVDHSSGHAKGREGGLRVNGRILNYVGMPEKLRET 213
YGKNK GYW YD+F EQ+ + P+ Q V+E+DHSSGH + RE GL V + G LR+T
Sbjct: 587 YGKNKDGYWGYDEFKEQIXXXXXXXXVFEPDMQVVVEIDHSSGHTRQREDGLHVGNMNVKNGGKQTVLRDT 657 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig51666.12497.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig51666.12497.1 >prot_H-paniculata_contig51666.12497.1 ID=prot_H-paniculata_contig51666.12497.1|Name=mRNA_H-paniculata_contig51666.12497.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=76bp YGKNKQGYWNYDKFAEQVQDLLDFYEMLLPNHQAVLEVDHSSGHAKGREGback to top mRNA from alignment at H-paniculata_contig51666:626..853+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig51666.12497.1 ID=mRNA_H-paniculata_contig51666.12497.1|Name=mRNA_H-paniculata_contig51666.12497.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=228bp|location=Sequence derived from alignment at H-paniculata_contig51666:626..853+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig51666:626..853+ >mRNA_H-paniculata_contig51666.12497.1 ID=mRNA_H-paniculata_contig51666.12497.1|Name=mRNA_H-paniculata_contig51666.12497.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=456bp|location=Sequence derived from alignment at H-paniculata_contig51666:626..853+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |