prot_H-paniculata_contig51641.12491.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig51641.12491.1
Unique Nameprot_H-paniculata_contig51641.12491.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length86
Homology
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BLAST of mRNA_H-paniculata_contig51641.12491.1 vs. uniprot
Match: D7FYF7_ECTSI (DRP, dynamin-related protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYF7_ECTSI)

HSP 1 Score: 83.6 bits (205), Expect = 7.190e-17
Identity = 43/83 (51.81%), Postives = 59/83 (71.08%), Query Frame = 0 
Query:    1 LQVTLSTYVDLVCKSMFDTVPKQVQSFLVIGTYHGLEGWMLDRVPADDLERLLSEDSQTQWKRREMERKLALFEEGLKIVRDA 83
            LQV L  Y D+VC+ +FD++PKQV  FLV G   G   WMLD+V   DL+R L+ED+ +Q KR+E+E KL+ FEE  KI+++A
Sbjct:  545 LQVILHAYSDVVCRRLFDSIPKQVHLFLVDGICKGFVTWMLDKVDETDLQRWLAEDALSQRKRKELESKLSQFEEAAKILKNA 627
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig51641.12491.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FYF7_ECTSI7.190e-1751.81DRP, dynamin-related protein n=1 Tax=Ectocarpus si... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003130Dynamin GTPase effectorPFAMPF02212GEDcoord: 4..82
e-value: 6.6E-11
score: 42.2
IPR020850GTPase effector domainPROSITEPS51388GEDcoord: 1..85
score: 15.375

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig51641contigH-paniculata_contig51641:178..435 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig51641.12491.1mRNA_H-paniculata_contig51641.12491.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig51641 178..435 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig51641.12491.1 ID=prot_H-paniculata_contig51641.12491.1|Name=mRNA_H-paniculata_contig51641.12491.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=86bp
LQVTLSTYVDLVCKSMFDTVPKQVQSFLVIGTYHGLEGWMLDRVPADDLE
RLLSEDSQTQWKRREMERKLALFEEGLKIVRDASI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003130GED
IPR020850GED_dom