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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | signal peptide |
| Exons | 1 |
| Model size | 1109 |
| Cds size | 1050 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig516.12485.1 >prot_H-paniculata_contig516.12485.1 ID=prot_H-paniculata_contig516.12485.1|Name=mRNA_H-paniculata_contig516.12485.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=350bp
MRMTRRCSGVIVLLALLCISGFGIRLHEDRVISSRRIDGSPGLGGESAGA
NHAGSVAERTIDKAGQLHTIYFGVPPRIYRTLSQRSVGRYVLAGSSLLGE
CVRVYAPPPLSNIWTQLDSMLSQKHKSLSSEGKNNSGEPGLSYDKFMSHD
DRSEEDEALLTSLDKYQRVSPPFLARHGISVQDDHLTSPSATVSNAPRAT
TNRTPVFPFTPISSLRRKRQPLPDDLDLLSEVEDEEEKDSVTDRPWNGTG
GRFSSNRRIDEGNKRRATHRERRVDHSTSTSQRVVGDAIMGHSTGRVGSA
EELGMEKNSRPLQKDMYPSTRNLIDGDDSAVELVKKLRDSVDGRKQGSI* back to topmRNA from alignment at H-paniculata_contig516:17772..18880+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig516.12485.1 ID=mRNA_H-paniculata_contig516.12485.1|Name=mRNA_H-paniculata_contig516.12485.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1109bp|location=Sequence derived from alignment at H-paniculata_contig516:17772..18880+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GTTGGATATGAGGATGACACGCCGCTGCTCCGGAGTTATCGTTCTATTGG
CTCTACTCTGCATCTCGGGTTTTGGAATACGCTTGCATGAAGACAGAGTA
ATTTCATCAAGAAGGATTGATGGAAGCCCTGGTCTGGGTGGAGAATCTGC
CGGAGCTAACCATGCCGGAAGTGTCGCAGAGAGAACTATTGACAAAGCCG
GACAGCTGCACACGATTTACTTTGGTGTACCTCCCCGCATTTACAGGACT
TTGTCCCAACGTTCGGTGGGTCGATACGTCTTGGCAGGTTCGTCATTATT
GGGAGAGTGCGTCCGAGTTTACGCTCCACCACCTCTGTCAAATATCTGGA
CTCAATTGGACAGTATGCTTTCCCAGAAACACAAGAGTTTGAGTTCTGAG
GGGAAGAACAACTCCGGTGAGCCAGGTCTGTCGTACGACAAATTCATGTC
GCACGACGATAGATCGGAGGAGGATGAAGCCCTACTCACTTCCTTGGACA
AGTATCAACGGGTATCTCCACCATTTCTAGCCCGGCACGGGATTTCTGTT
CAGGATGATCATCTTACCTCTCCCTCAGCGACAGTCAGCAACGCACCGAG
AGCGACGACAAATAGAACTCCTGTGTTCCCGTTTACACCTATTTCTAGTT
TGCGAAGGAAGCGCCAACCGCTACCAGACGACTTGGATTTATTGTCAGAA
GTTGAGGATGAGGAGGAAAAGGATTCAGTCACTGATCGCCCTTGGAATGG
CACGGGTGGGAGGTTCTCTTCGAATCGACGGATTGATGAAGGGAACAAGC
GGCGAGCTACCCATCGTGAAAGACGGGTCGATCACTCCACAAGCACATCA
CAACGAGTAGTTGGTGATGCGATTATGGGACATTCGACTGGGAGGGTTGG
TTCTGCAGAAGAGCTTGGCATGGAAAAAAATTCTCGGCCTCTTCAAAAGG
ACATGTATCCTTCCACTCGAAATTTGATTGACGGAGATGATAGTGCAGTT
GAATTGGTGAAGAAGTTACGAGATTCGGTAGATGGGCGGAAACAGGGTTC
GATTTAAGAAGATGGTTGGACGAGTTGGGCTTGTGGGCTTGTGACTTTCG
GCAGAGAAG back to topCoding sequence (CDS) from alignment at H-paniculata_contig516:17772..18880+ >mRNA_H-paniculata_contig516.12485.1 ID=mRNA_H-paniculata_contig516.12485.1|Name=mRNA_H-paniculata_contig516.12485.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2100bp|location=Sequence derived from alignment at H-paniculata_contig516:17772..18880+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAGGATGACACGCCGCTGCTCCGGAGTTATCGTTCTATTGGCTCTACT
CTGCATCTCGGGTTTTGGAATACGCTTGCATGAAGACAGAGTAATTTCAT
CAAGAAGGATTGATGGAAGCCCTGGTCTGGGTGGAGAATCTGCCGGAGCT
AACCATGCCGGAAGTGTCGCAGAGAGAACTATTGACAAAGCCGGACAGCT
GCACACGATTTACTTTGGTGTACCTCCCCGCATTTACAGGACTTTGTCCC
AACGTTCGGTGGGTCGATACGTCTTGGCAGGTTCGTCATTATTGGGAGAG
TGCGTCCGAGTTTACGCTCCACCACCTCTGTCAAATATCTGGACTCAATT
GGACAGTATGCTTTCCCAGAAACACAAGAGTTTGAGTTCTGAGGGGAAGA
ACAACTCCGGTGAGCCAGGTCTGTCGTACGACAAATTCATGTCGCACGAC
GATAGATCGGAGGAGGATGAAGCCCTACTCACTTCCTTGGACAAGTATCA
ACGGGTATCTCCACCATTTCTAGCCCGGCACGGGATTTCTGTTCAGGATG
ATCATCTTACCTCTCCCTCAGCGACAGTCAGCAACGCACCGAGAGCGACG
ACAAATAGAACTCCTGTGTTCCCGTTTACACCTATTTCTAGTTTGCGAAG
GAAGCGCCAACCGCTACCAGACGACTTGGATTTATTGTCAGAAGTTGAGG
ATGAGGAGGAAAAGGATTCAGTCACTGATCGCCCTTGGAATGGCACGGGT
GGGAGGTTCTCTTCGAATCGACGGATTGATGAAGGGAACAAGCGGCGAGC
TACCCATCGTGAAAGACGGGTCGATCACTCCACAAGCACATCACAACGAG
TAGTTGGTGATGCGATTATGGGACATTCGACTGGGAGGGTTGGTTCTGCA
GAAGAGCTTGGCATGGAAAAAAATTCTCGGCCTCTTCAAAAGGACATGTA
TCCTTCCACTCGAAATTTGATTGACGGAGATGATAGTGCAGTTGAATTGG
TGAAGAAGTTACGAGATTCGGTAGATGGGCGGAAACAGGGTTCGATTTAA
ATGAGGATGACACGCCGCTGCTCCGGAGTTATCGTTCTATTGGCTCTACT
CTGCATCTCGGGTTTTGGAATACGCTTGCATGAAGACAGAGTAATTTCAT
CAAGAAGGATTGATGGAAGCCCTGGTCTGGGTGGAGAATCTGCCGGAGCT
AACCATGCCGGAAGTGTCGCAGAGAGAACTATTGACAAAGCCGGACAGCT
GCACACGATTTACTTTGGTGTACCTCCCCGCATTTACAGGACTTTGTCCC
AACGTTCGGTGGGTCGATACGTCTTGGCAGGTTCGTCATTATTGGGAGAG
TGCGTCCGAGTTTACGCTCCACCACCTCTGTCAAATATCTGGACTCAATT
GGACAGTATGCTTTCCCAGAAACACAAGAGTTTGAGTTCTGAGGGGAAGA
ACAACTCCGGTGAGCCAGGTCTGTCGTACGACAAATTCATGTCGCACGAC
GATAGATCGGAGGAGGATGAAGCCCTACTCACTTCCTTGGACAAGTATCA
ACGGGTATCTCCACCATTTCTAGCCCGGCACGGGATTTCTGTTCAGGATG
ATCATCTTACCTCTCCCTCAGCGACAGTCAGCAACGCACCGAGAGCGACG
ACAAATAGAACTCCTGTGTTCCCGTTTACACCTATTTCTAGTTTGCGAAG
GAAGCGCCAACCGCTACCAGACGACTTGGATTTATTGTCAGAAGTTGAGG
ATGAGGAGGAAAAGGATTCAGTCACTGATCGCCCTTGGAATGGCACGGGT
GGGAGGTTCTCTTCGAATCGACGGATTGATGAAGGGAACAAGCGGCGAGC
TACCCATCGTGAAAGACGGGTCGATCACTCCACAAGCACATCACAACGAG
TAGTTGGTGATGCGATTATGGGACATTCGACTGGGAGGGTTGGTTCTGCA
GAAGAGCTTGGCATGGAAAAAAATTCTCGGCCTCTTCAAAAGGACATGTA
TCCTTCCACTCGAAATTTGATTGACGGAGATGATAGTGCAGTTGAATTGG
TGAAGAAGTTACGAGATTCGGTAGATGGGCGGAAACAGGGTTCGATTTAA back to top
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