mRNA_H-paniculata_contig5155.12478.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig5155.12478.1
Unique NamemRNA_H-paniculata_contig5155.12478.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig5155.12478.1 vs. uniprot
Match: D7FPP9_ECTSI (Alanine--tRNA ligase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPP9_ECTSI)

HSP 1 Score: 454 bits (1168), Expect = 1.110e-150
Identity = 203/253 (80.24%), Postives = 228/253 (90.12%), Query Frame = 1
Query:   13 FADKEWPAARIRSTFIKFFTENHEHTFWPSSPVVPHDDPTLLFVNAGMNQFKPLFLGTADPALKMSKLTRSANSQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGSYFKKEAIAWAWDCLTKEFKLDDSRLYATYFGGDEKLGLGPDEDAKGMWLQFLPAERVIPGSVKDNFWEMGDMGPCGPCTEIHYDRIGGRNAAQYVNADLPDVIEIWNVVFMQYNREGDGSLKDLPNKHIDTGMGFERLASILQ 771
            F+D  WPA+R+R +FI FFTE H+HTFW SSPVVPHDDPTLLF NAGMNQFKPLFLGTADPAL +SKLTR+ NSQKCIRAGGKHNDLDDVGKD+YHHTFFEMLGNWSFGSYFK+EAI +AW+CLT  +KLD SRLYATYFGGDEKL +G DEDAK +WL++LP  RV+P S+ DNFWEMGD+GPCGPC EIHYDRIGGR+AA+ VN D P+VIEIWNVVF+QYNRE DGSLK+LPNKHIDTG+GFERLASILQ
Sbjct:   26 FSDNGWPASRVRDSFISFFTEKHDHTFWKSSPVVPHDDPTLLFANAGMNQFKPLFLGTADPALPLSKLTRATNSQKCIRAGGKHNDLDDVGKDLYHHTFFEMLGNWSFGSYFKEEAIGYAWECLTTVYKLDPSRLYATYFGGDEKLRVGADEDAKKIWLKYLPESRVLPFSLADNFWEMGDVGPCGPCVEIHYDRIGGRDAAKDVNMDKPEVIEIWNVVFIQYNRENDGSLKELPNKHIDTGLGFERLASILQ 278          
BLAST of mRNA_H-paniculata_contig5155.12478.1 vs. uniprot
Match: A0A7S1TRR3_9STRA (Alanine--tRNA ligase (Fragment) n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TRR3_9STRA)

HSP 1 Score: 434 bits (1115), Expect = 1.320e-150
Identity = 193/251 (76.89%), Postives = 217/251 (86.45%), Query Frame = 1
Query:   25 EWPAARIRSTFIKFFTENHEHTFWPSSPVVPHDDPTLLFVNAGMNQFKPLFLGTADPALKMSKLTRSANSQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGSYFKKEAIAWAWDCLTKE--FKLDDSRLYATYFGGDEKLGLGPDEDAKGMWLQFLPAERVIPGSVKDNFWEMGDMGPCGPCTEIHYDRIGGRNAAQYVNADLPDVIEIWNVVFMQYNREGDGSLKDLPNKHIDTGMGFERLASILQ 771
            +WPA +IR TFIKFFT++ EH FWPSSPVVPHDDPTLLF NAGMNQ+KPLFLGT DP+L M+KLTR+ NSQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGSYFK EA+AW+W+CLT E  F +D  R+YATYFGGDE  GL  DE+ + +WLQFLP  RV+P    DNFWEMG+ GPCGPCTEIHYDRIGGR+AA  VNADLPDVIEIWN VF+Q+NRE DGSL++LP KH+DTGMGFERL SILQ
Sbjct:   43 KWPAKKIRETFIKFFTDSKEHVFWPSSPVVPHDDPTLLFANAGMNQYKPLFLGTCDPSLDMAKLTRACNSQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGSYFKAEAVAWSWECLTSEEYFGMDQERIYATYFGGDESQGLPADEETRQLWLQFLPESRVLPFGCADNFWEMGETGPCGPCTEIHYDRIGGRDAAALVNADLPDVIEIWNNVFIQFNRESDGSLRELPAKHVDTGMGFERLTSILQ 293          
BLAST of mRNA_H-paniculata_contig5155.12478.1 vs. uniprot
Match: A0A6V2XN65_HETAK (Alanine--tRNA ligase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2XN65_HETAK)

HSP 1 Score: 442 bits (1138), Expect = 2.710e-146
Identity = 199/252 (78.97%), Postives = 221/252 (87.70%), Query Frame = 1
Query:   16 ADKEWPAARIRSTFIKFFTENHEHTFWPSSPVVPHDDPTLLFVNAGMNQFKPLFLGTADPALKMSKLTRSANSQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGSYFKKEAIAWAWDCLTKEFKLDDSRLYATYFGGDEKLGLGPDEDAKGMWLQFLPAERVIPGSVKDNFWEMGDMGPCGPCTEIHYDRIGGRNAAQYVNADLPDVIEIWNVVFMQYNREGDGSLKDLPNKHIDTGMGFERLASILQ 771
            A+ EWPA RIR +FI FF + +EH FWPSSPVVPHDDPTLLF NAGMNQFKP FLGT DP+L M+KL+R+ NSQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFG+YFK+EAIAWAW+CLT+ F L   RLYATYFGGDE  GL PDE+A+ +WLQFLPAERV+P   KDNFWEMGD GPCGPCTEIHYDRIGGR+AA  VNADLPDVIEIWN VF+Q+NRE  G L++LPNKH+DTGMGFERLASILQ
Sbjct:   14 AELEWPAERIRESFIAFFRDRYEHVFWPSSPVVPHDDPTLLFANAGMNQFKPHFLGTMDPSLPMAKLSRAVNSQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGAYFKREAIAWAWECLTEVFGLSPERLYATYFGGDETQGLEPDEEAREIWLQFLPAERVLPFGCKDNFWEMGDTGPCGPCTEIHYDRIGGRDAAPLVNADLPDVIEIWNNVFIQFNREEGGVLRELPNKHVDTGMGFERLASILQ 265          
BLAST of mRNA_H-paniculata_contig5155.12478.1 vs. uniprot
Match: A0A7S2Y168_9STRA (Alanine--tRNA ligase (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y168_9STRA)

HSP 1 Score: 427 bits (1097), Expect = 8.630e-146
Identity = 188/249 (75.50%), Postives = 216/249 (86.75%), Query Frame = 1
Query:   25 EWPAARIRSTFIKFFTENHEHTFWPSSPVVPHDDPTLLFVNAGMNQFKPLFLGTADPALKMSKLTRSANSQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGSYFKKEAIAWAWDCLTKEFKLDDSRLYATYFGGDEKLGLGPDEDAKGMWLQFLPAERVIPGSVKDNFWEMGDMGPCGPCTEIHYDRIGGRNAAQYVNADLPDVIEIWNVVFMQYNREGDGSLKDLPNKHIDTGMGFERLASILQ 771
            EW A ++R  FI +F + + HTFWPSSPVVPHDDPTLLF NAGMNQ+KPLFLGT DP L MSKLTR+ NSQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFG YFK++AI WAW+CLT+ F LD+SRLYATYFGGD+K  L PD +AK +WL+FLPA +V+P   KDNFWEMGD+GPCGPCTEIHYDRIG R+AA+ VNADLPDVIEIWN VF+Q+NRE + +L++LP KH+DTGMGFERL SILQ
Sbjct:   51 EWSAGKVRQAFIDYFVQRNGHTFWPSSPVVPHDDPTLLFANAGMNQYKPLFLGTCDPKLPMSKLTRAVNSQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGDYFKEQAITWAWECLTEVFGLDESRLYATYFGGDKKQNLPPDNEAKDIWLRFLPASKVLPFGCKDNFWEMGDVGPCGPCTEIHYDRIGNRDAAKLVNADLPDVIEIWNNVFIQFNREDECTLRELPLKHVDTGMGFERLTSILQ 299          
BLAST of mRNA_H-paniculata_contig5155.12478.1 vs. uniprot
Match: A0A835Z4U5_9STRA (Alanine--tRNA ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4U5_9STRA)

HSP 1 Score: 437 bits (1123), Expect = 5.480e-144
Identity = 198/248 (79.84%), Postives = 217/248 (87.50%), Query Frame = 1
Query:   28 WPAARIRSTFIKFFTENHEHTFWPSSPVVPHDDPTLLFVNAGMNQFKPLFLGTADPALKMSKLTRSANSQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGSYFKKEAIAWAWDCLTKEFKLDDSRLYATYFGGDEKLGLGPDEDAKGMWLQFLPAERVIPGSVKDNFWEMGDMGPCGPCTEIHYDRIGGRNAAQYVNADLPDVIEIWNVVFMQYNREGDGSLKDLPNKHIDTGMGFERLASILQ 771
            WPA RIR TFI+FF E  +HTFWPSSPVVPHDDPTLLF NAGMNQFKPLFLGT DP+L +SKLTR+ NSQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFG YFK+EAI WAW+CLT  F L+  RLYATYFGGD  LGL PDE+AK +WL++LPAERV+P   KDNFWEMGD GPCGPCTEIHYDRIGGR+AA  VNAD PDVIEIWN VF+Q+NRE  G LK+LP+KH+DTGMGFERLASILQ
Sbjct:   18 WPAERIRKTFIEFF-EQKQHTFWPSSPVVPHDDPTLLFANAGMNQFKPLFLGTVDPSLPLSKLTRACNSQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGDYFKQEAITWAWECLTVTFGLNAERLYATYFGGDPALGLAPDEEAKAIWLKYLPAERVLPFGCKDNFWEMGDTGPCGPCTEIHYDRIGGRDAAVLVNADRPDVIEIWNNVFIQFNRESGGVLKELPSKHVDTGMGFERLASILQ 264          
BLAST of mRNA_H-paniculata_contig5155.12478.1 vs. uniprot
Match: A0A7R9U5A7_9STRA (Alanine--tRNA ligase (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U5A7_9STRA)

HSP 1 Score: 431 bits (1109), Expect = 2.190e-143
Identity = 195/254 (76.77%), Postives = 220/254 (86.61%), Query Frame = 1
Query:   16 ADKEWPAARIRSTFIKFFTENHEHTFWPSSPVVPHDDPTLLFVNAGMNQFKPLFLGTADPALKMSKLTRSANSQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGSYFKKEAIAWAWDCLTKE--FKLDDSRLYATYFGGDEKLGLGPDEDAKGMWLQFLPAERVIPGSVKDNFWEMGDMGPCGPCTEIHYDRIGGRNAAQYVNADLPDVIEIWNVVFMQYNREGDGSLKDLPNKHIDTGMGFERLASILQ 771
            A+ +WPA RIR TFI+FFTE  EHTFWPSSPVVP DDPTLLF NAGMNQFKPLFLGT DP+L M+KL R+ NSQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGSYFK EA+AW+W+CLT +  F LD +RLYATYFGGDE  GL  DED + +WL++LP  +V+P   KDNFWEMG+ GPCGPCTEIHYDRIGGR+AA  VNADLPDVIEIWN VF+Q+NRE DGSL++LP KH+DTGMGFERL+SILQ
Sbjct:   96 AELKWPAKRIRDTFIRFFTEGKEHTFWPSSPVVPVDDPTLLFANAGMNQFKPLFLGTVDPSLDMAKLKRAVNSQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGSYFKTEAVAWSWECLTSKDSFGLDPARLYATYFGGDEAQGLPSDEDTRQLWLKYLPEGQVLPFGCKDNFWEMGETGPCGPCTEIHYDRIGGRDAAALVNADLPDVIEIWNNVFIQFNRESDGSLRELPAKHVDTGMGFERLSSILQ 349          
BLAST of mRNA_H-paniculata_contig5155.12478.1 vs. uniprot
Match: A0A1S3CFQ7_CUCME (Alanine--tRNA ligase n=1 Tax=Cucumis melo TaxID=3656 RepID=A0A1S3CFQ7_CUCME)

HSP 1 Score: 414 bits (1064), Expect = 4.630e-143
Identity = 184/249 (73.90%), Postives = 209/249 (83.94%), Query Frame = 1
Query:   25 EWPAARIRSTFIKFFTENHEHTFWPSSPVVPHDDPTLLFVNAGMNQFKPLFLGTADPALKMSKLTRSANSQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGSYFKKEAIAWAWDCLTKEFKLDDSRLYATYFGGDEKLGLGPDEDAKGMWLQFLPAERVIPGSVKDNFWEMGDMGPCGPCTEIHYDRIGGRNAAQYVNADLPDVIEIWNVVFMQYNREGDGSLKDLPNKHIDTGMGFERLASILQ 771
            EWPA R+R TF +FF E + H +W SSPVVP +DPTLLF NAGMNQFKP+FLGT DP   +SKLTR+ N+QKCIRAGGKHNDLDDVGKD YHHTFFEMLGNWSFG YFKKEAI WAW+ LT+ +KL   R+YATYFGGDEK GL PD +A+ +WL+FLPAERV+P   KDNFWEMGD GPCGPCTEIHYDR+GGR+AAQ VN D P  IEIWN+VF+Q+NRE DGSLK LP KH+DTGMGFERL S+LQ
Sbjct:   84 EWPAERVRDTFFRFFEEKN-HVYWKSSPVVPVNDPTLLFANAGMNQFKPIFLGTVDPNTSLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKKEAITWAWELLTQVYKLPTDRIYATYFGGDEKAGLAPDNEARDIWLKFLPAERVLPFGCKDNFWEMGDTGPCGPCTEIHYDRLGGRDAAQLVNNDDPTCIEIWNLVFIQFNRENDGSLKPLPAKHVDTGMGFERLTSVLQ 331          
BLAST of mRNA_H-paniculata_contig5155.12478.1 vs. uniprot
Match: A0A7N0U3A1_KALFE (Alanine--tRNA ligase n=1 Tax=Kalanchoe fedtschenkoi TaxID=63787 RepID=A0A7N0U3A1_KALFE)

HSP 1 Score: 411 bits (1056), Expect = 5.980e-142
Identity = 185/249 (74.30%), Postives = 207/249 (83.13%), Query Frame = 1
Query:   25 EWPAARIRSTFIKFFTENHEHTFWPSSPVVPHDDPTLLFVNAGMNQFKPLFLGTADPALKMSKLTRSANSQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGSYFKKEAIAWAWDCLTKEFKLDDSRLYATYFGGDEKLGLGPDEDAKGMWLQFLPAERVIPGSVKDNFWEMGDMGPCGPCTEIHYDRIGGRNAAQYVNADLPDVIEIWNVVFMQYNREGDGSLKDLPNKHIDTGMGFERLASILQ 771
            +WPAAR+R TF+ FF E  EH  W SSPVVPH+DPTLLF NAGMNQFKP+FLGTADP   +SKLTR+ N+QKCIRAGGKHNDLDDVGKD YHHTFFEMLGNWSFG YFKKEAI WAW+ LT+ +KL   R YATYFGGD+KLGL PD +A+ +WLQ LP ERV+P   KDNFWEMGD GPCGPCTEIH+DRIG R+AA  VN D P  IEIWN+VF+Q+NRE DGSLK LP KH+DTGMGFERL SILQ
Sbjct:   12 KWPAARVRDTFVSFF-EGKEHVDWKSSPVVPHNDPTLLFANAGMNQFKPIFLGTADPNTALSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKKEAIQWAWELLTQVYKLPTDRFYATYFGGDDKLGLPPDNEARDIWLQLLPKERVLPFGCKDNFWEMGDTGPCGPCTEIHFDRIGNRDAAHLVNNDDPTCIEIWNLVFIQFNRESDGSLKPLPAKHVDTGMGFERLTSILQ 259          
BLAST of mRNA_H-paniculata_contig5155.12478.1 vs. uniprot
Match: A0A7J8T7Z0_GOSDV (Alanine--tRNA ligase (Fragment) n=2 Tax=Gossypium TaxID=3633 RepID=A0A7J8T7Z0_GOSDV)

HSP 1 Score: 409 bits (1051), Expect = 1.260e-141
Identity = 183/251 (72.91%), Postives = 205/251 (81.67%), Query Frame = 1
Query:   19 DKEWPAARIRSTFIKFFTENHEHTFWPSSPVVPHDDPTLLFVNAGMNQFKPLFLGTADPALKMSKLTRSANSQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGSYFKKEAIAWAWDCLTKEFKLDDSRLYATYFGGDEKLGLGPDEDAKGMWLQFLPAERVIPGSVKDNFWEMGDMGPCGPCTEIHYDRIGGRNAAQYVNADLPDVIEIWNVVFMQYNREGDGSLKDLPNKHIDTGMGFERLASILQ 771
            D EWPA ++R TFIKFF E   H  W SSPVVPH+DPTLLF NAGMNQFKP+FLGT DP   MSKLTR+ N+QKCIRAGGKHNDLDDVGKD YHHTFFEMLGNWSF +YFKK+AI WAW+ LTK + L   R+YATYFGGD+K GL PD +AK +WL+FLP E V+P   KDNFWEMGD GPCGPCTEIHYDR+G RNAA  VN D P  IEIWN+VF+Q+NRE DGSLK LP KH+DTGMGFERL S+LQ
Sbjct:   59 DTEWPAKKVRDTFIKFF-EGKNHVNWKSSPVVPHNDPTLLFANAGMNQFKPIFLGTVDPNTAMSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFRNYFKKDAIEWAWELLTKVYSLPTDRIYATYFGGDDKAGLPPDNEAKDIWLKFLPPEHVLPFGCKDNFWEMGDTGPCGPCTEIHYDRVGNRNAASLVNNDDPSCIEIWNLVFIQFNRESDGSLKPLPAKHVDTGMGFERLTSVLQ 308          
BLAST of mRNA_H-paniculata_contig5155.12478.1 vs. uniprot
Match: A0A5D2I9Y2_GOSTO (Alanine--tRNA ligase n=1 Tax=Gossypium tomentosum TaxID=34277 RepID=A0A5D2I9Y2_GOSTO)

HSP 1 Score: 410 bits (1054), Expect = 3.000e-140
Identity = 183/251 (72.91%), Postives = 206/251 (82.07%), Query Frame = 1
Query:   19 DKEWPAARIRSTFIKFFTENHEHTFWPSSPVVPHDDPTLLFVNAGMNQFKPLFLGTADPALKMSKLTRSANSQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGSYFKKEAIAWAWDCLTKEFKLDDSRLYATYFGGDEKLGLGPDEDAKGMWLQFLPAERVIPGSVKDNFWEMGDMGPCGPCTEIHYDRIGGRNAAQYVNADLPDVIEIWNVVFMQYNREGDGSLKDLPNKHIDTGMGFERLASILQ 771
            + EWPA ++R TFIKFF E   H  W SSPVVPH+DPTLLF NAGMNQFKP+FLGT DP   MSKLTR+ N+QKCIRAGGKHNDLDDVGKD YHHTFFEMLGNWSFG+YFKK+AI WAW+ LTK + L   R+YATYFGGD+K GL PD +AK +WL+FLP E V+P   KDNFWEMGD GPCGPCTEIHYDR+G RNAA  VN D P  IEIWN+VF+Q+NRE DGSLK LP KH+DTGMGFERL S+LQ
Sbjct:   59 EMEWPAKKVRDTFIKFF-EGKNHVNWKSSPVVPHNDPTLLFANAGMNQFKPIFLGTIDPNTAMSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGNYFKKDAIEWAWELLTKVYSLPTDRIYATYFGGDDKAGLPPDNEAKDIWLKFLPPEHVLPFGCKDNFWEMGDTGPCGPCTEIHYDRVGNRNAASLVNNDDPSCIEIWNLVFIQFNRESDGSLKPLPAKHVDTGMGFERLTSVLQ 308          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5155.12478.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FPP9_ECTSI1.110e-15080.24Alanine--tRNA ligase n=1 Tax=Ectocarpus siliculosu... [more]
A0A7S1TRR3_9STRA1.320e-15076.89Alanine--tRNA ligase (Fragment) n=2 Tax=Phaeomonas... [more]
A0A6V2XN65_HETAK2.710e-14678.97Alanine--tRNA ligase n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2Y168_9STRA8.630e-14675.50Alanine--tRNA ligase (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A835Z4U5_9STRA5.480e-14479.84Alanine--tRNA ligase n=1 Tax=Tribonema minus TaxID... [more]
A0A7R9U5A7_9STRA2.190e-14376.77Alanine--tRNA ligase (Fragment) n=1 Tax=Pinguiococ... [more]
A0A1S3CFQ7_CUCME4.630e-14373.90Alanine--tRNA ligase n=1 Tax=Cucumis melo TaxID=36... [more]
A0A7N0U3A1_KALFE5.980e-14274.30Alanine--tRNA ligase n=1 Tax=Kalanchoe fedtschenko... [more]
A0A7J8T7Z0_GOSDV1.260e-14172.91Alanine--tRNA ligase (Fragment) n=2 Tax=Gossypium ... [more]
A0A5D2I9Y2_GOSTO3.000e-14072.91Alanine--tRNA ligase n=1 Tax=Gossypium tomentosum ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5155contigH-paniculata_contig5155:5820..14288 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score421.4
Seed ortholog evalue3e-115
Seed eggNOG ortholog225117.XP_009351710.1
KEGG rclassRC00055,RC00523
KEGG koko:K01872
KEGG ReactionR03038
KEGG Pathwayko00970,map00970
KEGG ModuleM00359,M00360
Hectar predicted targeting categoryother localisation
GOsGO:0000049,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0004812,GO:0004813,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005829,GO:0006082,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006418,GO:0006419,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009507,GO:0009536,GO:0009987,GO:0010035,GO:0010038,GO:0010467,GO:0016070,GO:0016597,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0031406,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036094,GO:0042221,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046686,GO:0050896,GO:0071704,GO:0090304,GO:0097159,GO:0140098,GO:0140101,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576
EggNOG free text desc.Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain
EggNOG OGs37Q0V@33090,3GDU7@35493,4JM9N@91835,COG0013@1,KOG0188@2759
EC6.1.1.7
COG Functional cat.J
Best tax levelfabids
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01007,ko03016
Exons6
Model size771
Cds size771
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5155.12478.1prot_H-paniculata_contig5155.12478.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig5155 5820..14288 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930507.2144885-CDS-H-paniculata_contig5155:5819..59811622930507.2144885-CDS-H-paniculata_contig5155:5819..5981Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5155 5820..5981 +
1691481323.5011055-CDS-H-paniculata_contig5155:5819..59811691481323.5011055-CDS-H-paniculata_contig5155:5819..5981Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5155 5820..5981 +
1622930507.2315257-CDS-H-paniculata_contig5155:6573..67401622930507.2315257-CDS-H-paniculata_contig5155:6573..6740Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5155 6574..6740 +
1691481323.5169094-CDS-H-paniculata_contig5155:6573..67401691481323.5169094-CDS-H-paniculata_contig5155:6573..6740Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5155 6574..6740 +
1622930507.2519932-CDS-H-paniculata_contig5155:7687..77481622930507.2519932-CDS-H-paniculata_contig5155:7687..7748Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5155 7688..7748 +
1691481323.5278862-CDS-H-paniculata_contig5155:7687..77481691481323.5278862-CDS-H-paniculata_contig5155:7687..7748Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5155 7688..7748 +
1622930507.2717066-CDS-H-paniculata_contig5155:8612..87131622930507.2717066-CDS-H-paniculata_contig5155:8612..8713Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5155 8613..8713 +
1691481323.5472825-CDS-H-paniculata_contig5155:8612..87131691481323.5472825-CDS-H-paniculata_contig5155:8612..8713Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5155 8613..8713 +
1622930507.2852025-CDS-H-paniculata_contig5155:13573..137361622930507.2852025-CDS-H-paniculata_contig5155:13573..13736Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5155 13574..13736 +
1691481323.560818-CDS-H-paniculata_contig5155:13573..137361691481323.560818-CDS-H-paniculata_contig5155:13573..13736Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5155 13574..13736 +
1622930507.3029566-CDS-H-paniculata_contig5155:14171..142881622930507.3029566-CDS-H-paniculata_contig5155:14171..14288Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5155 14172..14288 +
1691481323.5721807-CDS-H-paniculata_contig5155:14171..142881691481323.5721807-CDS-H-paniculata_contig5155:14171..14288Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5155 14172..14288 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig5155.12478.1

>prot_H-paniculata_contig5155.12478.1 ID=prot_H-paniculata_contig5155.12478.1|Name=mRNA_H-paniculata_contig5155.12478.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=257bp
MTTGFADKEWPAARIRSTFIKFFTENHEHTFWPSSPVVPHDDPTLLFVNA
GMNQFKPLFLGTADPALKMSKLTRSANSQKCIRAGGKHNDLDDVGKDVYH
HTFFEMLGNWSFGSYFKKEAIAWAWDCLTKEFKLDDSRLYATYFGGDEKL
GLGPDEDAKGMWLQFLPAERVIPGSVKDNFWEMGDMGPCGPCTEIHYDRI
GGRNAAQYVNADLPDVIEIWNVVFMQYNREGDGSLKDLPNKHIDTGMGFE
RLASILQ
back to top

mRNA from alignment at H-paniculata_contig5155:5820..14288+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig5155.12478.1 ID=mRNA_H-paniculata_contig5155.12478.1|Name=mRNA_H-paniculata_contig5155.12478.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=8469bp|location=Sequence derived from alignment at H-paniculata_contig5155:5820..14288+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGACAACAGGTTTTGCGGACAAGGAATGGCCGGCGGCCCGGATTCGTTC GACATTTATCAAGTTCTTCACGGAGAACCACGAACACACTTTCTGGCCCT CCAGTCCCGTCGTGCCGCACGACGACCCAACCCTGTTATTCGTCAACGCT GGCATGAATCAGGTGAAGTGGAAAGTGACCTTGAAATCGTTTTCTGGCAC TCTGGTTACCCTTAGGATCTGTCTGTTTTTTATTAGATGGAAAGGTGTAG GCCATGTATATTTTGGCGAGCAGTTTTTGAAATGTGCGAGCTCTCCGTTG TCGAGATACATATTCGTATTCGTCTTTAAAACATTGACACCCCCCGGCTT TAGTGCAATAGATACTAACACAATGTCTGGCAGTAAGTGGTCAACTGAAT CTATAGCTGCTGCCCACACCGCATCGAACAACAATCGGTGTCCGTAGGCC TACGTAGATCGGGAGTGGCGATCACGTACAAACGATCGGTAGGGTACCGA TCAGAGAGGTGGATATATTAACCATGCGTGGATCAAGACGGTCTACTGAT CGTACGATGTGATGTATTGGCTCACAATGAGTGGAATTTACTGTGAATGC TTTGATCTGATCTGAACTAATCGGTTCGTTGGACCGTGGATTCCCAGTTA AAGCTGCCTACTGGAAGTATCTTGTGCGTTGTCGGTTCTTGCTGCTGTTG GGTTCTTGCTGCTGTTGGGTTCTTGCTGCTGTTGGGTTCTTGCTGCTGTT GTAGTTCAAGCCGCTTTTCCTGGGAACTGCGGATCCCGCCCTGAAGATGT CCAAGCTCACTCGTTCGGCTAACTCTCAAAAATGTATCCGTGCGGGGGGG AAGCACAATGACCTGGACGACGTGGGAAAGGACGTTTACCATCACACTTT CTTCGAAATGCTTGGCAACTGGTGAGATGTGAAAATAGAGCACGAGAGAG AGGAGAGAGTGAGGAGAAATGCACAGGTCGGCGCAATCCTGCTTTGGATA GAAATGAATCTTTTTTGGGTTTGGATATTGTTAACGGTGGGCAAAGTTGT GAGCACCGTACCCTAACTGTAACTCTTGCACCTTGCACCTACGCCTCTCG AGGGCAAAATTGCGTCTCGATTCTATCTTGAATCCCGCTCAAATACTGCC CCCCCGGGACAAATACGAATACTTGCAAATGGCCTTCACAGTAAATTGAA AGTATTCATCTGAGATTTTATAGTCCCACCCCTGTCTAATCGATTTGCGA GTATTATTAGCAGTCGTGGATGGTTCGAAGCACATAGAATACACGAGCTT ATTCTGAAAGTTACGCGACTATTGTCAATTTTTTGTGAAAACCATTTGCG CAAGTATTCGCATTTGTCTGGGGGGTGAAGTACTGGGCCGCTCCGTCACT TGCCAACGACCCTGCCCTGGACCCAGGCTCGTGGCGGGGTTGAGCAGTAG ATCATAGTAGAACCAAATACGTATTTCAGTCTAATGGAAGCGGTAATGAT GGGGGTATCGATGTTCTTCTCTCGATATTTTCTAGTCTCTTGTCAAGTGA CTTTTTGTCAAAATTTCAGTAGCCACAACACAGTTGGTATTGGTAGATCT CTTATGCTGATAAAAGAAACTTCACCCCATCCATGGTTAGGTTTGTTCAA CGTACCTCAATCAATATCACTTGTGTACACGTCGCGAAAATAGGTCAAAA AGGGGGCGTCCGACATAGGACAAATCTTTGAATATTAGAGAATGACCAAT ACATAGTCCTGGGAAGCTGTAATTCTTAGTATTACCTGCGAGATCTCGAC TGGGTCGTTTTTCATGAGTTGTATGTTTCTATTGGTCGTGTGTTCATAGT GTATTTTGTATCACTTAGGTCCTTCGGAAGCTACTTCAAGAAAGAAGCGA TCGCATGGGCGTGGGATTGCTTGACTAAGGTAAGCAAACGTCATGGGATA CCGGATGATACAGTGCGCAAGACATGCATTTCTTTGAAACCGTTAACGTC TCAAATACGCGACTCCCTTGGAGTATTTGCCTGGCTAGATTTTTCTCGAA AACTGACTCAAGGAGCGGGGGCCCCGAAAGTTACTTGGTTGGAGTGATGT CTTTTGACAGTCCCAGAATCGTATTTGCTGAGAAAACCGAGTTTGAAAAA CACGTCAATCAGGGGTGCGTGATGAAAGGGTTTACGGTGTACCTGGTGGG TGTAGCACGGGGCACAGTACGACCTCCGTGCGAGGAAGGTGTTTCCTTAA GGTGAAATATCTCAGGTTTGGCGACTGTCGCGGATGATGTGTTTTATCTT TTTTATCCAAACTCTTGGTATTGTCATCTGCTTGTTATACCGGTGCTGCC TGCTTGTTGTACGCCATTGGAATGTATGCAGTGCAGTCTACTTACCCTTG GACCAACGGGATTTGACGAAGTGATAATCCCACGTGACGAAAAAAAATGC CGGTGAATCGATACCATTTGTAACGGCTGTTGGTGTTATCATCAGAAGCC GTCGCTGCTCAGAACAGACGGGTAGTACGCATGAGTCTTGTTATTGCTGT CGATGTCAGATGCCCTCAGACCAGTACTTCTGGTGCTTTGTCTGAACCGT TGGAGGTATTTTTCACCCTCTCGGAGGAGAGGTGCGGTGTTTCGTCTCAC GTGTTTTCATCACTCACCTGATCTGTTCTTCTTGTCCACCTGTGGCATTG GCATTGACATTACCGTTAAAAAAAGAAAGAGTAATAATTGATGATCCAAC TGTTTCGTGTTCATTTCAACCTGATTGTTTGATTTATCGACAGGAGTTTA AACTGGATGATTCTCGACTGTACGCCACTTACTTCGGGGGGGACGAGAAG CTGGGCCTCGGGCCTGATGAAGATGCCAAGGGCATGTGGCTCCAGTAAGT GATTTTATTTTACTGCTTGATAATATATAATTTGGTGTTTTTAGGAGGGA GGCCGGGGGGGGTGCAAAGGAGATGTAATTTGGTTAAATTAAATTAATCT GTGCGTATGTATGTATATATATATATACACACTGTACAAAGGTTATAATA TAGCTAATTGTGCAAAGAATTGACTAGCCTTAATCCTTGAGGTATTTCTA CCGTAAAGCAAAAATGTTTACTTGCTCCATTTTTATTTATTTTTTGGTGC TCGAGATGGTTGTTTTTGACTGACGATGGAAGATATTGACATGGTTTTAC CTTGTTTTTGGAGGTTTTCTTGGGTACTGTCGTAGTTGGTATGTCTATCC TTATTCGTATTCTATTAATTTTACCTTGAACTTTTTGTCTAGGTGATGAT TAATTTACGCCTAATTTTACGCCCGAATTTTGAATGTTTTCAACATCATC GCTTCTATTGTGATTTTTTACAGTCATGATAAAGGCATGCCACATTCTTG CGAATATTGACCTCGGATCCCTACGATGCTGGGAAGGAGGATCGTATAGG GCTTTCAAAGGCCAAGCTACGCTTCACAAGGATGGCAGTAGCCAATGTTC AGTATCCTTGCGTAGCTGCTACTCCAGCCGATTACTGCCATCGGAATTTG GTCATAATGACTTCACCGAATTTTGTACACTTGGCGAGCGGGGGTGGAGG GGGTGAGGGAGCATATCTAGACAAAAGTCAGCGCTACCCCTGTCGAATAT TTGAATAGTTGTGTGGCTTTGTTATTTTTCCATGCATGTGGTGTTCGTAG ATAGGGAGTGTAGGGCGTTTGTATGGTTGTATCACACCGCGGACCTACGC CCGAACGAGTAGGGTAGCTCGTGAACTGAGCATGACTGGAATTCCAGTCA GAGGTCTTTTAGTGGGTGCAACTCCTACACCACCTACTTGGTTCGGCCGA ACCGGGGTGGCGCATACCCCGCAGAGGAATAAATAACTCTGTTCTGTTAA AAGAAATGTAGACATGTTTGGGTGAGTGTGGAAGCATCTGTAAAGGTTTT TGCCTCAGCCTTCCGAGATTAAAAAAAAAAATGGTTGTATCACAAAGCAG GTGTCGTAAACGAGCTCGAGACGCACAGCAAGCATAGGGAAAGGATATGG CAACCCAGAGATTGAGAAACTTGAATAGAAAAGAAAATTGAATGTGTCGC CACCAACTACCCGTGTAGGTTGTTCTTTATCGACTAACACCAGTCAATCA AGGTATATTCTAGTGTGCCGTAAACCCATGAGAACCTTCCAAGTCCCTCC CCAGGAATGTCACATAACAGTGACCACCGTTGATGGACCACTTCACTCTT CCGCCCCCCCCCCCGGCAGAAATGTGAATAAGTGGCGTGTTCGTCACAAA ATTTAAAAGAGGATTCGTCTGGTTTTCAAAATAAGCCCTTGTATTTTCTG TCCTACGGAGCGTCCACGACTGCCAATAATATACTCTTGGATCAAATAGA CCGGGGTGGATATTTTAATTAATTTGTCGACTAATTCTGAAACACAGGCG AATACTTTTTTCATTTTTTTGTGACAACCATGTTACAAGTATTTGTACTC GTCCGGAGGGTGAAATTTTGACGCATGAAAGAGTCCCCCCCCCCCTCCCC CCCCCCCGGCAAAGTCCAAGCCTACGCCTTACGAAACAAGAGACGGGAGT TGGAGCTAACAAGAGGCGAAACCCGGGTGAAGCGGCGAAGATCATTTGTT GACCCTTATGTCACTTTTTATGAGACATCTAATATTTTCTGAAAAAGTGA ATATTTAAAATAATCCAAGTAAGAAATCCCTTTGACAAACTTCTTAATGG GGAGGGGGGGGGGGAAGTTTGTATGTTCTTTTTTTAATATTCAAATAAGT CGACGAAGTTTTGCTCCATCGGGGGGGGGGATGGGGGATTTATTAATATC AAAATGGGACTTTTGGAAATTGGATTATTTGAATCTGAAAAATATGACGA AAAGGCAGGAGGGACATGATCTAGGCATGACTCGAAGCACTAGCGGCATC ATCAGAAAATACGGTAGTATCTGTCTGATTTTTGAAGAGTACAGAGAGTG AGGTACAACAGGCCACCCCCGCCACATCTCACACATAAGCTAACCTTGTC GCAGTACACATACAGACCCTGGCGTGATGGTGCCAGTTACTGAGGATGAG GATGTGTTCGATTGGTCCGGCAACGAGGATGAGATGTCGCTTGCTGTGTG TCAAGCAACCACAAGCCTGGTCCAGGTCATGTATGCAGCTGCACAGCCTA CTCTAGCATAGGGTCCGGTTCGATCGGCAGTTCGTTTTCAAGCTGGGGCC CATCACCCCCATGTCAAGACACCCTCTGGAGATGTTGACATTGTGCTTAA CGCTGACCTCTATCTTGTTTGCTATTACGGAGGAACACAATAATCAGGAG CATTTTTTTTTGGTTTTTCGGAAACTGAATTTTGGTTTTCCCCCGTTGGT GTACAGATTTTCGCTTCTAGCTGAAAACAATAACACACTCTAAAAGCACT TGAACAGGCATGCAGCAACCGATTGGTGCATATCGTATTCCATAGAGTTA CACCTCAAAATGTGAGTTTTTATAGTTTGCTCCTGATTATTATGTTCCTC CGTAATAACTACATGCAGCGTTTTTCCCGCGCTCTTCAAAATTGGGGATA TGACTTTACTTCTGTTCTCCTCGCAGGAGCTACCGCCTGTCCAAGTTTGG AACACCTTCGAAAATCACAGTTTTCTAGTAAGAAGTGGTTCTTCGACTTT TGAATTGGATATTTTCCGCTTGGATGATCGAAAATATCATATAATATATA TTTTTCAATTATCCAAGTTCCAATAAGCAGTGGCCATAAGAGGTAGGAAA TAACACTCCGAACTTGGTTTGCAATGCTCCATGAACTAGACGAAATTTTT GCCCTATACATGATTTTTTTTCACGTTTTACTCTATGTCTCGTTTTAGTT GCGGGAGGTGTGAGTACCTTTGATCACGGGTCTGAAAAAGCGATATCGGA GCGTGGAGGGGGAAAAAAAAAGCTCCAACGGGAGAAAGTCTTGAGATGTA TATAATATGTGCACACATATATATATATATATATATTCATTTACTGGTTG ACGGCGCGGTTGCGTATGAACTGTTATAGCCAAACGATCAAGACCATTAG ACGCGATGTATCTGAAACGTATTGTGTGCTTTTTTATTCACGGTGGAGAC AGGAGGTTTGGATCATTTCTTATGGGAGCTTTTGTTGCCTACCTCTTTTT TGGGTCCAGAGTGGCTTTTGGCAATGAAAAAGCCTCCGAGTTTTGTAACA AGAGGGTTGGAACTGGGGAACAATTGCTCGCGTGTTTCCGTAGAGAAGAT CATGTTAATCCAGTTGTTGGAGTTTTGAAGTAACGGGTTTTTTCTGTCTC ACTTTTACCCAGATGCTTTTTTTTTTTTGTTTTTTAACCGAAGAGAAAGA AAAAAGAAATACACGATTGTCCGGCAAATAAATTTTTGATGTCATTAGAA ACGTGACAACTTTTTTTTTTTTTTTTTTTTTCGCGTACGACAGGCGTGTA AGTATTTTTTACGCTGCTGTGAAGGTTACAGCGAATGCTCTTCGAAGACG GATGTTCTTGTGTCGTGTAGTATTACAGTACGGTCAATCAAATGGAATCG CCGAACATATATTTGTTTGTTTGCCTTATATATTTTCGGGTTGTTTATTC CTTGCGACATTTCTCGAATAATTCGAAGCCTATGTGTCTCGTGACGACTG ATTAACCTGCCGATTACGGTTACAAAAAATAGGCTCATCCCATCCAAATT CGGCAAAGAGAGCGTATTCGAGAACTAGACCCGTTGAGAAACGGAGAAGC GGGTTGCTCCAGAGACCCCCTGAGTGAGGTGACGAATAACGGCGTCTCTC GCAATAAAAACGTCGGTATCTATCCAGACACCAACTTCCCGAGGACGAAG GTCCTTGCGCTCGTGGAAGATGCCGGCATCTACCAATGGTTGATTTAGGG ATTAACATGGGACGGATGTTCCTCCTGTTTCGCTTTTTTTTTTTTTTTTT TTTTTGCAAACAACGGACTCCGTTTTATGTTGATCTATTTTCTCTAAAGG GTGGGGTGGGAATCTATTTTCTCCCGTCCCATGGTATGAGGTGGAGGGAG GTCACGGGATGCGATGACGGTTGTACATGATTATTACCCCCCATTATGAA TTTTGCACACATGCGAGGAGGATTAATGTAGTGATTAGGCGATGGTGGCT CTCTTAACGTTGCAATCCCGACACCCCACCGGTGTCGAGTTGAAGGTGGG ATCAGCTGTAACATACAACATTCATACATACACACGCTCTGAAAATGTCA AATATGAAGAGGATTCCTTAGACCGGGGGGGACCTCGTTTTCCGTGACGG TTAAACGGTCTGTTTCAAGTATGCATCTAAAATGACCTGGTCGTTTTGTG TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGTGTGGAATTCTG TCTTGCCGTGTCCTATCGTTTTCTACGAGGACGGAATGATGTTCTGTCCT ACCCTGTCGTGTCGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCCTTGCG TTAGCTGCCCTGTCTCCCAGTCTTACCACCTCTTCCCGTTCTGTGAGGCC GTTTTTTAATAGGACAGGGAAATGTTCTCTTGTCCCGCTCCGTCATGACG CGAATCCTCCTTGTCCTTCCCGTCTCGTCGTTCCGTACCAAGCCCTTAAC TAACGAGTTCAATTCTATTCCGATTTTCTTGTTGCGGGGGTGTGTTTGTC ATAGATTCCTCCCCGCCGAACGCGTAATTCCTGGAAGCGTCAAGGACAAC TTCTGGGAGATGGGGGACATGGGCCCGTGCGGTCCCTGCACCGAGATTCA CTACGACCGGATTGGTGGCCGTAACGCCGCCCAGTACGTTAACGCAGATC TACCGGATGTGATCGAGGTGTGTTGGCGGTGTGGTGTGTGTGACAGTCGA GTCAGTACAAGTTTAGTTAATAACTAGGGTTGAAAAAGGAACAGGGTAAA TGACAAAAAGTAAGAAAAAAATAAAAATAAAAATATATATATATATATAT ATATATAAACACAAAATGTATATATACATTTTCATTTTATGTGTGTTTAT ACGATGATCTCGGAGCCGCGCTATTTTTTTTTTTTTCTTGTGGATGTTTT GATATCACTTGGAACGGTAATATTCAGATGGGAAACATTATTGATTTTAA ATGTTTTTCCAACGTTCCTTTTTTTTTTTTTTAATTATTCGTGTCTTGGG GAAATTTTACACGTTGACCAGCTCTACAAGAACGATGATACTAATATGGT CATTTTCGTCCTATTTACTTTCACTTTTTTTTTTTCTTTTTCTTTTTGTC AGATTTGGAATGTGGTTTTCATGCAGTATAACAGGGAAGGTGACGGAAGC CTCAAAGATTTGCCCAACAAGCATATCGACACTGGAATGGGCTTCGAGCG ACTGGCCTCTATCCTCCAG
back to top

Coding sequence (CDS) from alignment at H-paniculata_contig5155:5820..14288+

>mRNA_H-paniculata_contig5155.12478.1 ID=mRNA_H-paniculata_contig5155.12478.1|Name=mRNA_H-paniculata_contig5155.12478.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1542bp|location=Sequence derived from alignment at H-paniculata_contig5155:5820..14288+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGACAACAGGTTTTGCGGACAAGGAATGGCCGGCGGCCCGGATTCGTTC
GACATTTATCAAGTTCTTCACGGAGAACCACGAACACACTTTCTGGCCCT
CCAGTCCCGTCGTGCCGCACGACGACCCAACCCTGTTATTCGTCAACGCT
GGCATGAATCAGATGACAACAGGTTTTGCGGACAAGGAATGGCCGGCGGC
CCGGATTCGTTCGACATTTATCAAGTTCTTCACGGAGAACCACGAACACA
CTTTCTGGCCCTCCAGTCCCGTCGTGCCGCACGACGACCCAACCCTGTTA
TTCGTCAACGCTGGCATGAATCAGTTCAAGCCGCTTTTCCTGGGAACTGC
GGATCCCGCCCTGAAGATGTCCAAGCTCACTCGTTCGGCTAACTCTCAAA
AATGTATCCGTGCGGGGGGGAAGCACAATGACCTGGACGACGTGGGAAAG
GACGTTTACCATCACACTTTCTTCGAAATGCTTGGCAACTGTTCAAGCCG
CTTTTCCTGGGAACTGCGGATCCCGCCCTGAAGATGTCCAAGCTCACTCG
TTCGGCTAACTCTCAAAAATGTATCCGTGCGGGGGGGAAGCACAATGACC
TGGACGACGTGGGAAAGGACGTTTACCATCACACTTTCTTCGAAATGCTT
GGCAACTGGTCCTTCGGAAGCTACTTCAAGAAAGAAGCGATCGCATGGGC
GTGGGATTGCTTGACTAAGGTCCTTCGGAAGCTACTTCAAGAAAGAAGCG
ATCGCATGGGCGTGGGATTGCTTGACTAAGGAGTTTAAACTGGATGATTC
TCGACTGTACGCCACTTACTTCGGGGGGGACGAGAAGCTGGGCCTCGGGC
CTGATGAAGATGCCAAGGGCATGTGGCTCCAGAGTTTAAACTGGATGATT
CTCGACTGTACGCCACTTACTTCGGGGGGGACGAGAAGCTGGGCCTCGGG
CCTGATGAAGATGCCAAGGGCATGTGGCTCCAATTCCTCCCCGCCGAACG
CGTAATTCCTGGAAGCGTCAAGGACAACTTCTGGGAGATGGGGGACATGG
GCCCGTGCGGTCCCTGCACCGAGATTCACTACGACCGGATTGGTGGCCGT
AACGCCGCCCAGTACGTTAACGCAGATCTACCGGATGTGATCGAGATTCC
TCCCCGCCGAACGCGTAATTCCTGGAAGCGTCAAGGACAACTTCTGGGAG
ATGGGGGACATGGGCCCGTGCGGTCCCTGCACCGAGATTCACTACGACCG
GATTGGTGGCCGTAACGCCGCCCAGTACGTTAACGCAGATCTACCGGATG
TGATCGAGATTTGGAATGTGGTTTTCATGCAGTATAACAGGGAAGGTGAC
GGAAGCCTCAAAGATTTGCCCAACAAGCATATCGACACTGGAATGGGCTT
CGAGCGACTGGCCTCTATCCTCCAGATTTGGAATGTGGTTTTCATGCAGT
ATAACAGGGAAGGTGACGGAAGCCTCAAAGATTTGCCCAACAAGCATATC
GACACTGGAATGGGCTTCGAGCGACTGGCCTCTATCCTCCAG
back to top