mRNA_H-paniculata_contig5155.12478.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig5155.12478.1 vs. uniprot
Match: D7FPP9_ECTSI (Alanine--tRNA ligase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPP9_ECTSI) HSP 1 Score: 454 bits (1168), Expect = 1.110e-150 Identity = 203/253 (80.24%), Postives = 228/253 (90.12%), Query Frame = 1
Query: 13 FADKEWPAARIRSTFIKFFTENHEHTFWPSSPVVPHDDPTLLFVNAGMNQFKPLFLGTADPALKMSKLTRSANSQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGSYFKKEAIAWAWDCLTKEFKLDDSRLYATYFGGDEKLGLGPDEDAKGMWLQFLPAERVIPGSVKDNFWEMGDMGPCGPCTEIHYDRIGGRNAAQYVNADLPDVIEIWNVVFMQYNREGDGSLKDLPNKHIDTGMGFERLASILQ 771
F+D WPA+R+R +FI FFTE H+HTFW SSPVVPHDDPTLLF NAGMNQFKPLFLGTADPAL +SKLTR+ NSQKCIRAGGKHNDLDDVGKD+YHHTFFEMLGNWSFGSYFK+EAI +AW+CLT +KLD SRLYATYFGGDEKL +G DEDAK +WL++LP RV+P S+ DNFWEMGD+GPCGPC EIHYDRIGGR+AA+ VN D P+VIEIWNVVF+QYNRE DGSLK+LPNKHIDTG+GFERLASILQ
Sbjct: 26 FSDNGWPASRVRDSFISFFTEKHDHTFWKSSPVVPHDDPTLLFANAGMNQFKPLFLGTADPALPLSKLTRATNSQKCIRAGGKHNDLDDVGKDLYHHTFFEMLGNWSFGSYFKEEAIGYAWECLTTVYKLDPSRLYATYFGGDEKLRVGADEDAKKIWLKYLPESRVLPFSLADNFWEMGDVGPCGPCVEIHYDRIGGRDAAKDVNMDKPEVIEIWNVVFIQYNRENDGSLKELPNKHIDTGLGFERLASILQ 278
BLAST of mRNA_H-paniculata_contig5155.12478.1 vs. uniprot
Match: A0A7S1TRR3_9STRA (Alanine--tRNA ligase (Fragment) n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TRR3_9STRA) HSP 1 Score: 434 bits (1115), Expect = 1.320e-150 Identity = 193/251 (76.89%), Postives = 217/251 (86.45%), Query Frame = 1
Query: 25 EWPAARIRSTFIKFFTENHEHTFWPSSPVVPHDDPTLLFVNAGMNQFKPLFLGTADPALKMSKLTRSANSQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGSYFKKEAIAWAWDCLTKE--FKLDDSRLYATYFGGDEKLGLGPDEDAKGMWLQFLPAERVIPGSVKDNFWEMGDMGPCGPCTEIHYDRIGGRNAAQYVNADLPDVIEIWNVVFMQYNREGDGSLKDLPNKHIDTGMGFERLASILQ 771
+WPA +IR TFIKFFT++ EH FWPSSPVVPHDDPTLLF NAGMNQ+KPLFLGT DP+L M+KLTR+ NSQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGSYFK EA+AW+W+CLT E F +D R+YATYFGGDE GL DE+ + +WLQFLP RV+P DNFWEMG+ GPCGPCTEIHYDRIGGR+AA VNADLPDVIEIWN VF+Q+NRE DGSL++LP KH+DTGMGFERL SILQ
Sbjct: 43 KWPAKKIRETFIKFFTDSKEHVFWPSSPVVPHDDPTLLFANAGMNQYKPLFLGTCDPSLDMAKLTRACNSQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGSYFKAEAVAWSWECLTSEEYFGMDQERIYATYFGGDESQGLPADEETRQLWLQFLPESRVLPFGCADNFWEMGETGPCGPCTEIHYDRIGGRDAAALVNADLPDVIEIWNNVFIQFNRESDGSLRELPAKHVDTGMGFERLTSILQ 293
BLAST of mRNA_H-paniculata_contig5155.12478.1 vs. uniprot
Match: A0A6V2XN65_HETAK (Alanine--tRNA ligase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2XN65_HETAK) HSP 1 Score: 442 bits (1138), Expect = 2.710e-146 Identity = 199/252 (78.97%), Postives = 221/252 (87.70%), Query Frame = 1
Query: 16 ADKEWPAARIRSTFIKFFTENHEHTFWPSSPVVPHDDPTLLFVNAGMNQFKPLFLGTADPALKMSKLTRSANSQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGSYFKKEAIAWAWDCLTKEFKLDDSRLYATYFGGDEKLGLGPDEDAKGMWLQFLPAERVIPGSVKDNFWEMGDMGPCGPCTEIHYDRIGGRNAAQYVNADLPDVIEIWNVVFMQYNREGDGSLKDLPNKHIDTGMGFERLASILQ 771
A+ EWPA RIR +FI FF + +EH FWPSSPVVPHDDPTLLF NAGMNQFKP FLGT DP+L M+KL+R+ NSQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFG+YFK+EAIAWAW+CLT+ F L RLYATYFGGDE GL PDE+A+ +WLQFLPAERV+P KDNFWEMGD GPCGPCTEIHYDRIGGR+AA VNADLPDVIEIWN VF+Q+NRE G L++LPNKH+DTGMGFERLASILQ
Sbjct: 14 AELEWPAERIRESFIAFFRDRYEHVFWPSSPVVPHDDPTLLFANAGMNQFKPHFLGTMDPSLPMAKLSRAVNSQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGAYFKREAIAWAWECLTEVFGLSPERLYATYFGGDETQGLEPDEEAREIWLQFLPAERVLPFGCKDNFWEMGDTGPCGPCTEIHYDRIGGRDAAPLVNADLPDVIEIWNNVFIQFNREEGGVLRELPNKHVDTGMGFERLASILQ 265
BLAST of mRNA_H-paniculata_contig5155.12478.1 vs. uniprot
Match: A0A7S2Y168_9STRA (Alanine--tRNA ligase (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y168_9STRA) HSP 1 Score: 427 bits (1097), Expect = 8.630e-146 Identity = 188/249 (75.50%), Postives = 216/249 (86.75%), Query Frame = 1
Query: 25 EWPAARIRSTFIKFFTENHEHTFWPSSPVVPHDDPTLLFVNAGMNQFKPLFLGTADPALKMSKLTRSANSQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGSYFKKEAIAWAWDCLTKEFKLDDSRLYATYFGGDEKLGLGPDEDAKGMWLQFLPAERVIPGSVKDNFWEMGDMGPCGPCTEIHYDRIGGRNAAQYVNADLPDVIEIWNVVFMQYNREGDGSLKDLPNKHIDTGMGFERLASILQ 771
EW A ++R FI +F + + HTFWPSSPVVPHDDPTLLF NAGMNQ+KPLFLGT DP L MSKLTR+ NSQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFG YFK++AI WAW+CLT+ F LD+SRLYATYFGGD+K L PD +AK +WL+FLPA +V+P KDNFWEMGD+GPCGPCTEIHYDRIG R+AA+ VNADLPDVIEIWN VF+Q+NRE + +L++LP KH+DTGMGFERL SILQ
Sbjct: 51 EWSAGKVRQAFIDYFVQRNGHTFWPSSPVVPHDDPTLLFANAGMNQYKPLFLGTCDPKLPMSKLTRAVNSQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGDYFKEQAITWAWECLTEVFGLDESRLYATYFGGDKKQNLPPDNEAKDIWLRFLPASKVLPFGCKDNFWEMGDVGPCGPCTEIHYDRIGNRDAAKLVNADLPDVIEIWNNVFIQFNREDECTLRELPLKHVDTGMGFERLTSILQ 299
BLAST of mRNA_H-paniculata_contig5155.12478.1 vs. uniprot
Match: A0A835Z4U5_9STRA (Alanine--tRNA ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4U5_9STRA) HSP 1 Score: 437 bits (1123), Expect = 5.480e-144 Identity = 198/248 (79.84%), Postives = 217/248 (87.50%), Query Frame = 1
Query: 28 WPAARIRSTFIKFFTENHEHTFWPSSPVVPHDDPTLLFVNAGMNQFKPLFLGTADPALKMSKLTRSANSQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGSYFKKEAIAWAWDCLTKEFKLDDSRLYATYFGGDEKLGLGPDEDAKGMWLQFLPAERVIPGSVKDNFWEMGDMGPCGPCTEIHYDRIGGRNAAQYVNADLPDVIEIWNVVFMQYNREGDGSLKDLPNKHIDTGMGFERLASILQ 771
WPA RIR TFI+FF E +HTFWPSSPVVPHDDPTLLF NAGMNQFKPLFLGT DP+L +SKLTR+ NSQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFG YFK+EAI WAW+CLT F L+ RLYATYFGGD LGL PDE+AK +WL++LPAERV+P KDNFWEMGD GPCGPCTEIHYDRIGGR+AA VNAD PDVIEIWN VF+Q+NRE G LK+LP+KH+DTGMGFERLASILQ
Sbjct: 18 WPAERIRKTFIEFF-EQKQHTFWPSSPVVPHDDPTLLFANAGMNQFKPLFLGTVDPSLPLSKLTRACNSQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGDYFKQEAITWAWECLTVTFGLNAERLYATYFGGDPALGLAPDEEAKAIWLKYLPAERVLPFGCKDNFWEMGDTGPCGPCTEIHYDRIGGRDAAVLVNADRPDVIEIWNNVFIQFNRESGGVLKELPSKHVDTGMGFERLASILQ 264
BLAST of mRNA_H-paniculata_contig5155.12478.1 vs. uniprot
Match: A0A7R9U5A7_9STRA (Alanine--tRNA ligase (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U5A7_9STRA) HSP 1 Score: 431 bits (1109), Expect = 2.190e-143 Identity = 195/254 (76.77%), Postives = 220/254 (86.61%), Query Frame = 1
Query: 16 ADKEWPAARIRSTFIKFFTENHEHTFWPSSPVVPHDDPTLLFVNAGMNQFKPLFLGTADPALKMSKLTRSANSQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGSYFKKEAIAWAWDCLTKE--FKLDDSRLYATYFGGDEKLGLGPDEDAKGMWLQFLPAERVIPGSVKDNFWEMGDMGPCGPCTEIHYDRIGGRNAAQYVNADLPDVIEIWNVVFMQYNREGDGSLKDLPNKHIDTGMGFERLASILQ 771
A+ +WPA RIR TFI+FFTE EHTFWPSSPVVP DDPTLLF NAGMNQFKPLFLGT DP+L M+KL R+ NSQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGSYFK EA+AW+W+CLT + F LD +RLYATYFGGDE GL DED + +WL++LP +V+P KDNFWEMG+ GPCGPCTEIHYDRIGGR+AA VNADLPDVIEIWN VF+Q+NRE DGSL++LP KH+DTGMGFERL+SILQ
Sbjct: 96 AELKWPAKRIRDTFIRFFTEGKEHTFWPSSPVVPVDDPTLLFANAGMNQFKPLFLGTVDPSLDMAKLKRAVNSQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGSYFKTEAVAWSWECLTSKDSFGLDPARLYATYFGGDEAQGLPSDEDTRQLWLKYLPEGQVLPFGCKDNFWEMGETGPCGPCTEIHYDRIGGRDAAALVNADLPDVIEIWNNVFIQFNRESDGSLRELPAKHVDTGMGFERLSSILQ 349
BLAST of mRNA_H-paniculata_contig5155.12478.1 vs. uniprot
Match: A0A1S3CFQ7_CUCME (Alanine--tRNA ligase n=1 Tax=Cucumis melo TaxID=3656 RepID=A0A1S3CFQ7_CUCME) HSP 1 Score: 414 bits (1064), Expect = 4.630e-143 Identity = 184/249 (73.90%), Postives = 209/249 (83.94%), Query Frame = 1
Query: 25 EWPAARIRSTFIKFFTENHEHTFWPSSPVVPHDDPTLLFVNAGMNQFKPLFLGTADPALKMSKLTRSANSQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGSYFKKEAIAWAWDCLTKEFKLDDSRLYATYFGGDEKLGLGPDEDAKGMWLQFLPAERVIPGSVKDNFWEMGDMGPCGPCTEIHYDRIGGRNAAQYVNADLPDVIEIWNVVFMQYNREGDGSLKDLPNKHIDTGMGFERLASILQ 771
EWPA R+R TF +FF E + H +W SSPVVP +DPTLLF NAGMNQFKP+FLGT DP +SKLTR+ N+QKCIRAGGKHNDLDDVGKD YHHTFFEMLGNWSFG YFKKEAI WAW+ LT+ +KL R+YATYFGGDEK GL PD +A+ +WL+FLPAERV+P KDNFWEMGD GPCGPCTEIHYDR+GGR+AAQ VN D P IEIWN+VF+Q+NRE DGSLK LP KH+DTGMGFERL S+LQ
Sbjct: 84 EWPAERVRDTFFRFFEEKN-HVYWKSSPVVPVNDPTLLFANAGMNQFKPIFLGTVDPNTSLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKKEAITWAWELLTQVYKLPTDRIYATYFGGDEKAGLAPDNEARDIWLKFLPAERVLPFGCKDNFWEMGDTGPCGPCTEIHYDRLGGRDAAQLVNNDDPTCIEIWNLVFIQFNRENDGSLKPLPAKHVDTGMGFERLTSVLQ 331
BLAST of mRNA_H-paniculata_contig5155.12478.1 vs. uniprot
Match: A0A7N0U3A1_KALFE (Alanine--tRNA ligase n=1 Tax=Kalanchoe fedtschenkoi TaxID=63787 RepID=A0A7N0U3A1_KALFE) HSP 1 Score: 411 bits (1056), Expect = 5.980e-142 Identity = 185/249 (74.30%), Postives = 207/249 (83.13%), Query Frame = 1
Query: 25 EWPAARIRSTFIKFFTENHEHTFWPSSPVVPHDDPTLLFVNAGMNQFKPLFLGTADPALKMSKLTRSANSQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGSYFKKEAIAWAWDCLTKEFKLDDSRLYATYFGGDEKLGLGPDEDAKGMWLQFLPAERVIPGSVKDNFWEMGDMGPCGPCTEIHYDRIGGRNAAQYVNADLPDVIEIWNVVFMQYNREGDGSLKDLPNKHIDTGMGFERLASILQ 771
+WPAAR+R TF+ FF E EH W SSPVVPH+DPTLLF NAGMNQFKP+FLGTADP +SKLTR+ N+QKCIRAGGKHNDLDDVGKD YHHTFFEMLGNWSFG YFKKEAI WAW+ LT+ +KL R YATYFGGD+KLGL PD +A+ +WLQ LP ERV+P KDNFWEMGD GPCGPCTEIH+DRIG R+AA VN D P IEIWN+VF+Q+NRE DGSLK LP KH+DTGMGFERL SILQ
Sbjct: 12 KWPAARVRDTFVSFF-EGKEHVDWKSSPVVPHNDPTLLFANAGMNQFKPIFLGTADPNTALSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKKEAIQWAWELLTQVYKLPTDRFYATYFGGDDKLGLPPDNEARDIWLQLLPKERVLPFGCKDNFWEMGDTGPCGPCTEIHFDRIGNRDAAHLVNNDDPTCIEIWNLVFIQFNRESDGSLKPLPAKHVDTGMGFERLTSILQ 259
BLAST of mRNA_H-paniculata_contig5155.12478.1 vs. uniprot
Match: A0A7J8T7Z0_GOSDV (Alanine--tRNA ligase (Fragment) n=2 Tax=Gossypium TaxID=3633 RepID=A0A7J8T7Z0_GOSDV) HSP 1 Score: 409 bits (1051), Expect = 1.260e-141 Identity = 183/251 (72.91%), Postives = 205/251 (81.67%), Query Frame = 1
Query: 19 DKEWPAARIRSTFIKFFTENHEHTFWPSSPVVPHDDPTLLFVNAGMNQFKPLFLGTADPALKMSKLTRSANSQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGSYFKKEAIAWAWDCLTKEFKLDDSRLYATYFGGDEKLGLGPDEDAKGMWLQFLPAERVIPGSVKDNFWEMGDMGPCGPCTEIHYDRIGGRNAAQYVNADLPDVIEIWNVVFMQYNREGDGSLKDLPNKHIDTGMGFERLASILQ 771
D EWPA ++R TFIKFF E H W SSPVVPH+DPTLLF NAGMNQFKP+FLGT DP MSKLTR+ N+QKCIRAGGKHNDLDDVGKD YHHTFFEMLGNWSF +YFKK+AI WAW+ LTK + L R+YATYFGGD+K GL PD +AK +WL+FLP E V+P KDNFWEMGD GPCGPCTEIHYDR+G RNAA VN D P IEIWN+VF+Q+NRE DGSLK LP KH+DTGMGFERL S+LQ
Sbjct: 59 DTEWPAKKVRDTFIKFF-EGKNHVNWKSSPVVPHNDPTLLFANAGMNQFKPIFLGTVDPNTAMSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFRNYFKKDAIEWAWELLTKVYSLPTDRIYATYFGGDDKAGLPPDNEAKDIWLKFLPPEHVLPFGCKDNFWEMGDTGPCGPCTEIHYDRVGNRNAASLVNNDDPSCIEIWNLVFIQFNRESDGSLKPLPAKHVDTGMGFERLTSVLQ 308
BLAST of mRNA_H-paniculata_contig5155.12478.1 vs. uniprot
Match: A0A5D2I9Y2_GOSTO (Alanine--tRNA ligase n=1 Tax=Gossypium tomentosum TaxID=34277 RepID=A0A5D2I9Y2_GOSTO) HSP 1 Score: 410 bits (1054), Expect = 3.000e-140 Identity = 183/251 (72.91%), Postives = 206/251 (82.07%), Query Frame = 1
Query: 19 DKEWPAARIRSTFIKFFTENHEHTFWPSSPVVPHDDPTLLFVNAGMNQFKPLFLGTADPALKMSKLTRSANSQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGSYFKKEAIAWAWDCLTKEFKLDDSRLYATYFGGDEKLGLGPDEDAKGMWLQFLPAERVIPGSVKDNFWEMGDMGPCGPCTEIHYDRIGGRNAAQYVNADLPDVIEIWNVVFMQYNREGDGSLKDLPNKHIDTGMGFERLASILQ 771
+ EWPA ++R TFIKFF E H W SSPVVPH+DPTLLF NAGMNQFKP+FLGT DP MSKLTR+ N+QKCIRAGGKHNDLDDVGKD YHHTFFEMLGNWSFG+YFKK+AI WAW+ LTK + L R+YATYFGGD+K GL PD +AK +WL+FLP E V+P KDNFWEMGD GPCGPCTEIHYDR+G RNAA VN D P IEIWN+VF+Q+NRE DGSLK LP KH+DTGMGFERL S+LQ
Sbjct: 59 EMEWPAKKVRDTFIKFF-EGKNHVNWKSSPVVPHNDPTLLFANAGMNQFKPIFLGTIDPNTAMSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGNYFKKDAIEWAWELLTKVYSLPTDRIYATYFGGDDKAGLPPDNEAKDIWLKFLPPEHVLPFGCKDNFWEMGDTGPCGPCTEIHYDRVGNRNAASLVNNDDPSCIEIWNLVFIQFNRESDGSLKPLPAKHVDTGMGFERLTSVLQ 308 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5155.12478.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig5155.12478.1 >prot_H-paniculata_contig5155.12478.1 ID=prot_H-paniculata_contig5155.12478.1|Name=mRNA_H-paniculata_contig5155.12478.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=257bp MTTGFADKEWPAARIRSTFIKFFTENHEHTFWPSSPVVPHDDPTLLFVNAback to top mRNA from alignment at H-paniculata_contig5155:5820..14288+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig5155.12478.1 ID=mRNA_H-paniculata_contig5155.12478.1|Name=mRNA_H-paniculata_contig5155.12478.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=8469bp|location=Sequence derived from alignment at H-paniculata_contig5155:5820..14288+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig5155:5820..14288+ >mRNA_H-paniculata_contig5155.12478.1 ID=mRNA_H-paniculata_contig5155.12478.1|Name=mRNA_H-paniculata_contig5155.12478.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1542bp|location=Sequence derived from alignment at H-paniculata_contig5155:5820..14288+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |