prot_H-paniculata_contig5154.12477.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5154.12477.1
Unique Nameprot_H-paniculata_contig5154.12477.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length315
Homology
BLAST of mRNA_H-paniculata_contig5154.12477.1 vs. uniprot
Match: D8LAW8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAW8_ECTSI)

HSP 1 Score: 293 bits (750), Expect = 5.300e-95
Identity = 212/322 (65.84%), Postives = 234/322 (72.67%), Query Frame = 0
Query:    1 MDQVELEVMRVHGLTEKTDNKGSFWIKFDLGYSKDEKTGKGFTPSYRAESDTVDLGFKICHHVKRARSTQMAFQNRRASLEIFYKRNMFRSGYVDAPCPGPYAQC------------PTTSILGVYIYTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVERVKKVVLTPGEKSDPFAVESLDSNNVLEMEILAIEGKAATGDLTAVMRKGALDTKLLMLVSAVQSGELDLPGYCNIVKERVGRDKVLAIFLKGEGRTKEAIAVMKRIRVMEEELAEVPQEEE 310
            MDQVELE+ RVHGLTEKTDN+GSFWIKFDLGYSKDEK GKGFT SYRA++D+VD+ +K   +VKRARS+QMAFQNRRA LEIF+K+N+   G  D   PGP A              P     G    T                             XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   + + VVLT  EK+DPF VE+LDSNNVLE EI AI  KAATGDL +VMRKGAL+TKLLMLVSAVQSGELDLP YCNI+KERV RDKVLA++LK E RTKEA+AVMKRIR MEEELA VPQEEE
Sbjct:    1 MDQVELEIYRVHGLTEKTDNRGSFWIKFDLGYSKDEKIGKGFTQSYRADADSVDVDYKTSSYVKRARSSQMAFQNRRAGLEIFHKKNIVSGGKFDRQVPGPAAAASDHVRADVVHAYPGPKGGGRRAGTWSCRCGCEKELEVGEWPTVSLDEPVAQAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAAKFQSVVLTDKEKTDPFGVENLDSNNVLEAEIEAIAPKAATGDLASVMRKGALETKLLMLVSAVQSGELDLPAYCNILKERVVRDKVLAMYLKDEKRTKEAVAVMKRIRAMEEELAGVPQEEE 322          
BLAST of mRNA_H-paniculata_contig5154.12477.1 vs. uniprot
Match: A0A6H5JQ36_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQ36_9PHAE)

HSP 1 Score: 281 bits (718), Expect = 3.920e-84
Identity = 223/350 (63.71%), Postives = 246/350 (70.29%), Query Frame = 0
Query:    1 MDQVELEVMRVHGLTEKTDNKGSFWIKFDLGYSKDEKTGKGFTPSYRAESDTVDLGFKICHHVKRARSTQMAFQNRRASLEIFYKRNMFRSGYVDAPCPGPYAQCPTTSILGVY-------------------------------------IYTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVERVKKVVLTPGEKSDPFAVESLDSNNVLEMEILAIEGKAATGDLTAVMRKGALDTKLLMLVSAVQSGELDLPGYCNIVKERVGRDKVLAIFLKGEGRTKEAIAVMKRIRVMEEELAEVPQEEEGEG 313
            MDQVELE+ RVHGLTEKTDN+GSFWIKFDLGYSKDEK GKGFT SYRA++D+VD+ +K   +VKRARS+QMAFQNRRA LEIF+KRN+   G +   C  P     TT  L V                                      +                    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   + + VVLT  EK DPF VE+LDSNNVLE EI AI  KAATGDL +VMRKGAL+TKLLMLVSAVQSGELDLP YCNI+KERV RDKVLA++LK E RTKEA+AVMKRIR MEEELA VPQEEE +G
Sbjct:  559 MDQVELEIYRVHGLTEKTDNRGSFWIKFDLGYSKDEKIGKGFTQSYRADADSVDVDYKTSCYVKRARSSQMAFQNRRAGLEIFHKRNIVSGGRLIGKCVVPLQPLLTTCELTVSTPILTEGRREAGGSVELSLRLRKPISADEVVVTEEKELEVGEWPTVSLDEPVAQPPAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAAKFQSVVLTDKEKIDPFGVENLDSNNVLEAEIEAIAPKAATGDLASVMRKGALETKLLMLVSAVQSGELDLPAYCNILKERVVRDKVLAMYLKDEKRTKEAVAVMKRIRAMEEELAGVPQEEEEDG 908          
BLAST of mRNA_H-paniculata_contig5154.12477.1 vs. uniprot
Match: A0A835ZDR7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDR7_9STRA)

HSP 1 Score: 97.1 bits (240), Expect = 2.050e-21
Identity = 60/118 (50.85%), Postives = 73/118 (61.86%), Query Frame = 0
Query:  194 VLTPGEKSDPFAVESLDSNNVLEMEILAIEGKAATGDLTAVMRKGALDTKLLMLVSAVQSGELDLPGYCNIVKERVGRDKVLAIFLKGEGRTKEAIAVMKRIRVMEEELAEVPQEEEG 311
            +LTP E SDP     + SNNVLE EI A    AA  D  A  R+  L+ KL  L  AV  GEL L  YCN+V ER  RD+VLA++L   GR  EA  V +R+R+ME+ELA VP+EE G
Sbjct:    1 MLTPLEMSDPLDPAHMASNNVLEDEIAAA-AVAAGADPVAAARRMGLELKLRCLEGAVAGGELTLRDYCNMVAERAARDRVLALWLMRGGRAAEAKRVARRVRLMEDELAGVPEEERG 117          
BLAST of mRNA_H-paniculata_contig5154.12477.1 vs. uniprot
Match: A0A4D9CWK9_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CWK9_9STRA)

HSP 1 Score: 66.6 bits (161), Expect = 1.660e-8
Identity = 44/116 (37.93%), Postives = 67/116 (57.76%), Query Frame = 0
Query:  195 LTPGEKSDPFAVESLDSNNVLEMEI--LAIEGKAATGDLTAVMRKGALDTKLLMLVSAVQSGELDLPGYCNIVKERVGRDKVLAIFLKGEGRTKEAIAVMKRIRVMEEELAEVPQE 308
            LT  E+ DP +V  L SN+VLE E+  LA        +   V+R+  L+ KL +LV  VQ  E+ +  Y + + ERV RDK+LA++   + +   A  V++R+++MEEEL  V  E
Sbjct:  566 LTELEREDPLSVSLLVSNDVLEHELSLLAASNPEKLLESERVIREAELNMKLNVLVLRVQREEITIDQYVSTLVERVKRDKLLALYCSHQQKRALAFRVLRRVKIMEEELRGVEGE 681          
BLAST of mRNA_H-paniculata_contig5154.12477.1 vs. uniprot
Match: A0A7S2C9N7_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2C9N7_9STRA)

HSP 1 Score: 63.5 bits (153), Expect = 1.360e-7
Identity = 41/115 (35.65%), Postives = 62/115 (53.91%), Query Frame = 0
Query:  195 LTPGEKSDPFAVESLDSNNVLEMEILAIE----GKAATGDLTAVMRKGALDTKLLMLVSAVQSGELDLPGYCNIVKERVGRDKVLAIFLKGEGRTKEAIAVMKRIRVMEEELAEV 305
            LT  EK  P + + + S  VLE EI   E       A   +  +++   L T++ +L     SG+L    Y   V+ER+GRDK+L  +LK   R+KE +AV +R++VM   +AEV
Sbjct:  333 LTAEEKKQPLSPQWMVSEAVLEAEIATAEKLQAAAGANASIDLIVQSQTLQTQMDLLQIQAGSGQLSPHAYLERVEERIGRDKLLMRYLKENNRSKECVAVFRRVKVM---IAEV 444          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5154.12477.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LAW8_ECTSI5.300e-9565.84Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JQ36_9PHAE3.920e-8463.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835ZDR7_9STRA2.050e-2150.85Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A4D9CWK9_9STRA1.660e-837.93Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A7S2C9N7_9STRA1.360e-735.65Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5154contigH-paniculata_contig5154:1318..10508 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5154.12477.1mRNA_H-paniculata_contig5154.12477.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5154 1318..10508 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5154.12477.1 ID=prot_H-paniculata_contig5154.12477.1|Name=mRNA_H-paniculata_contig5154.12477.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=315bp
MDQVELEVMRVHGLTEKTDNKGSFWIKFDLGYSKDEKTGKGFTPSYRAES
DTVDLGFKICHHVKRARSTQMAFQNRRASLEIFYKRNMFRSGYVDAPCPG
PYAQCPTTSILGVYIYTCVCVCEKEIEVGEWPPPERFAPTPAPTVAPVPT
PVAQAAHAPLPDTSSASASSAAAAGVAGAGAGTGAGVERVKKVVLTPGEK
SDPFAVESLDSNNVLEMEILAIEGKAATGDLTAVMRKGALDTKLLMLVSA
VQSGELDLPGYCNIVKERVGRDKVLAIFLKGEGRTKEAIAVMKRIRVMEE
ELAEVPQEEEGEGG*
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