prot_H-paniculata_contig5149.12467.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5149.12467.1
Unique Nameprot_H-paniculata_contig5149.12467.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length769
Homology
BLAST of mRNA_H-paniculata_contig5149.12467.1 vs. uniprot
Match: A0A6H5KMU8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMU8_9PHAE)

HSP 1 Score: 60.1 bits (144), Expect = 6.400e-6
Identity = 46/131 (35.11%), Postives = 65/131 (49.62%), Query Frame = 0
Query:  113 DALRVLLLQWFRTNNGQYVSTINLQQASLQLCIACREFKTLHVKMGNDTPETLWTPMTEAAAPTVSTDAPTTAASSTRVPTLFPKRVTCHASFTTAMCAHPCFARLDCLVFRDRINEGIAGAVWPEKLQQL 243
            DAL + L Q    N G Y S + LQ ASLQLC+ACR   T H+ +  D    LW P + A A    T +   +   +RVP L P++VT + +  +       F  +D LVF D  +  +    WP  L++L
Sbjct:   17 DALDIALNQVSGVN-GWYTSKLQLQLASLQLCLACRRVPTSHLTVERDVLALLW-PHSAAEA----TRSRLVSLGQSRVPALRPRKVTWNLATLSMRHCGDAFESVDVLVFGDSFDYRVDRVTWPPGLKKL 141          
BLAST of mRNA_H-paniculata_contig5149.12467.1 vs. uniprot
Match: A0A6H5K4H1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4H1_9PHAE)

HSP 1 Score: 60.1 bits (144), Expect = 7.910e-6
Identity = 46/141 (32.62%), Postives = 62/141 (43.97%), Query Frame = 0
Query:  109 SQCLDALRVLLLQWFRTNNGQYVSTINLQQASLQLCIACREFKTLHVKMGNDTPETLWTPMTEAAAPTVSTDAPTTAASSTRVPTLFPKRVTCHASFTTAMCAHP-CFARLDCLVFRDRINEGIAGAVWPEKLQQLKLGFY 248
            S+CL+A RV L Q        YVST  LQ ASL  C+ACR+  TL + + +  P  L   +    A  V   A       +RVP    + VT H      + A     A +D  +     N  I    WP KL++L+ G Y
Sbjct:   28 SRCLEAFRVALQQTCLDRESWYVSTTQLQLASLPFCLACRDSVTLCLTVDDSIPRRLLADVGGNEA--VVAPAGPCQCGRSRVPRFHAREVTWHRQSCVELSASIYALAEVDFFILDGGFNRAIGAVAWPRKLRRLEFGDY 166          
BLAST of mRNA_H-paniculata_contig5149.12467.1 vs. uniprot
Match: A0A6H5JYF0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYF0_9PHAE)

HSP 1 Score: 57.8 bits (138), Expect = 5.010e-5
Identity = 45/127 (35.43%), Postives = 64/127 (50.39%), Query Frame = 0
Query:  130 YVSTINLQQASLQLCIACREFKTLHVKMGNDTPETLWTPMTEAAAPTVSTDAPTTAASSTRVPTLFPKRVTCHASFTTAMCAHPCFARLDC--LVFRDRINEGIAGAVWPEKLQQLKL--GFYFNQP 252
            Y ST  LQQASL+ CIACR+++TL +++   TP TL   +    AP+  +  P      TRVP L  +RV  +    T +   P FA  D   L F       +    WP++L+++    G  FNQP
Sbjct:    8 YTSTKELQQASLEFCIACRKYQTLRLRVDVQTPRTL---LAAVDAPSPHSKRPCR----TRVPRLRARRVIWNMPTATEL-KSPIFALKDVVRLDFGPAFEGSLESVAWPQRLKEIDFSWGSLFNQP 126          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5149.12467.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KMU8_9PHAE6.400e-635.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K4H1_9PHAE7.910e-632.62Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JYF0_9PHAE5.010e-535.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008615FNIPPFAMPF05725FNIPcoord: 689..730
e-value: 1.7E-6
score: 28.1
coord: 337..380
e-value: 5.6E-5
score: 23.2
coord: 381..423
e-value: 3.6E-7
score: 30.2
coord: 645..687
e-value: 3.0E-7
score: 30.5
coord: 579..619
e-value: 2.5E-5
score: 24.3
coord: 535..577
e-value: 5.6E-7
score: 29.6
coord: 237..269
e-value: 2.8E-5
score: 24.2
coord: 491..532
e-value: 4.5E-9
score: 36.3
coord: 271..313
e-value: 1.4E-6
score: 28.4
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 227..662
e-value: 9.7E-7
score: 29.4
NoneNo IPR availablePANTHERPTHR32134:SF86coord: 271..444
coord: 216..289
coord: 557..707
coord: 369..487
NoneNo IPR availablePANTHERPTHR32134UNCHARACTERIZEDcoord: 369..487
coord: 557..707
NoneNo IPR availablePANTHERPTHR32134:SF86coord: 446..620
NoneNo IPR availablePANTHERPTHR32134UNCHARACTERIZEDcoord: 271..444
coord: 446..620
coord: 216..289
NoneNo IPR availablePANTHERPTHR32134:SF86coord: 620..749
NoneNo IPR availablePANTHERPTHR32134UNCHARACTERIZEDcoord: 620..749
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 217..572

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5149contigH-paniculata_contig5149:6686..13560 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5149.12467.1mRNA_H-paniculata_contig5149.12467.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5149 4570..14229 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5149.12467.1 ID=prot_H-paniculata_contig5149.12467.1|Name=mRNA_H-paniculata_contig5149.12467.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=769bp
MADAGDDCGKREMPDKIEDLSEMGEYKEHNEQQQAIPRAHVTVVAAAPTR
DSDVTNLNTGECLPDLPEKMGEHKENNQQQQATPGACVKAVTAAPSRDSA
VTNLNTAPSQCLDALRVLLLQWFRTNNGQYVSTINLQQASLQLCIACREF
KTLHVKMGNDTPETLWTPMTEAAAPTVSTDAPTTAASSTRVPTLFPKRVT
CHASFTTAMCAHPCFARLDCLVFRDRINEGIAGAVWPEKLQQLKLGFYFN
QPIHSIVWPTSLKRLIFGFCFNQPIDGAAWPHTLEELTLGSSFDQPIEEV
AWPASLRQLTFGNHFNQSIEGMRWPTSLQRVVFGNFFNQPINRVSWPAWL
QQLVFGRQLDQPVDNVEWPASLEQLTFGYDFNQPIKSITTSSSLKQLIFG
DGFRQPIEGLAWPASLQQLTFGSGFCQPIEGVAWPSSLQQVTFGSNFNEP
IEGVKWPASLQQVTFSKFFNMSIENVVWPSSLQRLTFGWHFNQPIERATW
SDSLQKLKFGWQFNQPIERATWPDSLQKLKFSGEFNQPIECTTWPTSLQR
VTFGDSYNQPIESTTWPASLQQVEFGESFNQPIEGSVWPDSLQRIKLGIG
FNQPIEGVVWPKSIFQLRFFKYFDQPIKGVRWPASLQRLEFGWAFNQPIN
GVVWPASLQQLTFGAGFNQSITRVSWPTSLQELAFGSRFNQPIGKVDWPA
SLQQLTFGDRFNKRVDHVKWPNSLQKLTFGIDFRQKIYNIDWPASLEQLT
CPTGVDRGLRTRPRVTRI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008615FNIP
IPR032675LRR_dom_sf