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Homology
BLAST of mRNA_H-paniculata_contig5148.12465.1 vs. uniprot
Match: D7G624_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G624_ECTSI) HSP 1 Score: 321 bits (823), Expect = 3.150e-95 Identity = 229/604 (37.91%), Postives = 295/604 (48.84%), Query Frame = 1
Query: 391 LASMEQQLRAGVVPTLPHSREARSAL-ALSLPP------------------------------LAPVFSRASRAVTKVVDMGPVEPVRRKRKYTKQNKKAGE--------------WVLVTTWQFSEKAFRGLS------FAKELWMMMTSFGDPRGSIRCKCTKRGNARCPCLAAVAAMESLVHAFATRLVAVCRQWSCARVFYFKHLRMAMPGEMREFLSWKEAHTKGSVTPAEEKRAGIQLCSGQD-------------------------EADGDPEDAKI---------DVDEVSKVVEG-------------------------------------------------EDGVLLEGKGSFDSPEDD---DISTGVEEKELVVEEEEVTSRILQRKTFADKLTSDMEEGDYVDMYFEYRKAFFLVSR------GGRKDSTPGSRKYFLDFVGLDDKSREAKSRKTLDALAYMMYDYVGLVVETAIRQRNGGRLVALPEGAPLTEAEINAAAIRIPCLPDREQRERVRAMRADNPEGIS-SKPLSRFAVGLEYRGDPRKWPCNTIERGQVRVEGGEVVDASDKRLAQEAMALLETDFADF 1770
L +MEQQLR+G+ PTLP S + R+ L A SL P + + S +S + VV + P +R R + G +V+V W FSEK RG+ F ELWMMM +FGDPRG++ CKC+ G CPC+ VAAME LV A R+V VCR+WS KH+ MAMPGEMRE+++WKEAH+K E+ A ++L D G+ ++ ++ G + +L + K E+D D G E +E EEEEV SRI RK FAD+ T MEE DYV +FE+RKAFFL R G +K PGSR + ++ L D S+EAK +K L+ALA+MMYDYVG V+E AIR+R GGRLV A L+ EI AA +P L REQRE VRA RA NPEGI+ ++PLSRF +GLE+RGDP +WP NTIE G++ V GGEVVD +DK LA+EA AL E+DFADF
Sbjct: 79 LLTMEQQLRSGITPTLPTSADDRAGLLASSLVPNDSSGSSXXXXXXXXXXXXXXXXXXXXXXXITSLDSSSSSVSSFVVPITPSLTKKRGRISGRGIVLPGSIGRGRGGAAAPELSFVVVKEWAFSEKKKRGVEVVEKPPFFSELWMMMAAFGDPRGNVTCKCSGHGEKACPCIEGVAAMEKLVKAVGIRMVHVCREWSAPSRIRVKHIWMAMPGEMREYMAWKEAHSKRGTKSEVERGADLRLSDVDDXXXXXXXXXXXXXXXXXDVAHKGGMRVGGNXXXXXXXXXXXXXXSSIEPTGEIASGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAMAGVTHSEATPWQKQQILPKNKHRKQQHEEDKRSDGDGGGEAREWAAEEEEVASRIENRKRFADERTVGMEEEDYVKTFFEFRKAFFLKGRCRTNPHGDKKKHPPGSRPFLASYLELQD-SQEAKDKKLLEALAFMMYDYVGRVIEGAIRKRTGGRLVCDDSDAMLSAEEITAAGAALPPLSGREQRENVRAFRAANPEGIAYNRPLSRFTIGLEHRGDPLRWPRNTIEGGRMLVGGGEVVDTNDKSLAEEATALFESDFADF 681
BLAST of mRNA_H-paniculata_contig5148.12465.1 vs. uniprot
Match: A0A6H5L1L2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1L2_9PHAE) HSP 1 Score: 319 bits (817), Expect = 3.140e-94 Identity = 230/614 (37.46%), Postives = 294/614 (47.88%), Query Frame = 1
Query: 391 LASMEQQLRAGVVPTLPHSREARSAL-ALSLPP-----------------------------LAPVFSRASRAVTKVVDMGPVEPVRRKRKYTKQNK---------KAG--------EWVLVTTWQFSEKAFRGLSFAK------ELWMMMTSFGDPRGSIRCKCTKRGNARCPCLAAVAAMESLVHAFATRLVAVCRQWSCARVFYFKHLRMAMPGEMREFLSWKEAHTKGSVTPAEEKRAGIQLCSGQD-------------------------------------EADGDPEDAKIDVDEVSKVVEGE------------------------------------------------------DGVLLEGKGSFDSPEDD---DISTGVEEKELVVEEEEVTSRILQRKTFADKLTSDMEEGDYVDMYFEYRKAFFLVSR------GGRKDSTPGSRKYFLDFVGLDDKSREAKSRKTLDALAYMMYDYVGLVVETAIRQRNGGRLVALPEGAPLTEAEINAAAIRIPCLPDREQRERVRAMRADNPEGIS-SKPLSRFAVGLEYRGDPRKWPCNTIERGQVRVEGGEVVDASDKRLAQEAMALLETDFADF 1770
L +MEQQLR+G+ PTLP S + R+ L A SL P +S +V+ V P+ P K++ + + G +V+V W FSEK RG+ K ELWMMM +FGDPRG++ CKC+ G CPC+ VAAME LV A R+V VCR+WS KH+ M MPGEMRE+++WKEAH+K E+ A ++L D +++GD S GE +L + K E++ D G E +E EEEEV SRI RK FAD+ T MEE DYV +FE+RKAFFL R RK + PGSR + ++ L D +EAK +K L+ALA+MMYDYVG V+E AIR+R GGRLV A L+ EI AA +P L REQRE VRA RA NPEGI+ ++PLSRF +GLEYRGDP +WP NTIE G++ V GGEVVD +DK LA+EAMAL E+DFADF
Sbjct: 83 LLTMEQQLRSGITPTLPTSADDRAGLLASSLVPNDSSGSSSNSMXXXXXXXXXXXXXXXXXXXTTSLGNSSSSVSSFVV--PITPSLTKKRGRTSGRGIVLPGSIGRGGGGAAAPELSFVVVNEWAFSEKKKRGVEVVKKPPFFSELWMMMAAFGDPRGNVTCKCSGHGEKACPCIEGVAAMEKLVKAVGIRMVHVCREWSAPSRIRVKHIWMTMPGEMREYMAWKEAHSKRGTKSEVERGADLRLSDVDDXXXXXXXXXXXXXXXXXXXXXXXXNYVAHKGGMNVRGDSNGDAPARNKGKGASSTEPNGEITSGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDKAMAGVTHGEATPWQKQHILPKNKHRKQQHEEEKRSDGDGGAEAREWAAEEEEVASRIENRKRFADERTVGMEEEDYVKTFFEFRKAFFLKGRCRTNPHRDRKKNPPGSRPFLASYLELQDP-QEAKDKKLLEALAFMMYDYVGRVIEGAIRKRTGGRLVCDDSDAMLSAEEITAAGAALPPLSGREQRENVRAFRAANPEGIAYNRPLSRFPIGLEYRGDPLRWPRNTIEGGRMLVGGGEVVDTNDKSLAEEAMALFESDFADF 693
BLAST of mRNA_H-paniculata_contig5148.12465.1 vs. uniprot
Match: A0A836CHP8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHP8_9STRA) HSP 1 Score: 86.3 bits (212), Expect = 6.880e-14 Identity = 106/411 (25.79%), Postives = 155/411 (37.71%), Query Frame = 1
Query: 625 QFSEKAFRGLS-FAKELWMMMTSFGDPRGSIRCKCTKRGNARCPCLAAVAAMESLVHAFATRLVAVCRQWSCARVFYFKHLRMAMPGEMREFLSWKEAHTKGSVTPAEEKRAGIQLCSGQDEADGDPEDAKIDVDEVSKVVEGEDG------------VLLEG--------------------KGSFDSPE-----DDDISTGVEEKELVVE------EEEVTSRILQRKTFADKLTSDMEEGDYVDMYFEYRKAFFLVSRGGRKD----STP---GSRKYFLDFVGLDDKSREAKSRKTLDALAYMMYDYVGLVVETAIRQRN---GGRLVALPEGAPLTEAEINAAAIRIPCLPDREQRERVRAMRADNPEGISSKPLSRFAVGLEYRGDPRKWPCNTIERGQVRVEGG 1695
QFS+ A + L F KE+ M+ +F C V A E + ++V + + F L+ +P EM E+ W EA + V +EK A ++ G +A I D G D V EG G+ + P D S+ + E VVE V R+ QR FAD T M Y D + + R AFF+ + KD + P GS YFL ++G R + ALAY++YD++G+++E AIR+R G L +LP PL E+ A +IP R + + +G+ L + G+ Y GDPR WP + V V G
Sbjct: 101 QFSDAAMKALPPFTKEICDMIVAFAHE-----------------CCLRVRAQE-----YGRQIVEAVNRGTGQAFFTIDDLKELLPCEMHEYTVWMEARRRAHV---KEKGASDDTKVNNNKGSGAASEASISDDXXXXXXXGGDASXXXXXXXXVASVRSEGGGHSGGGAHGSKQGKRGHPQAGAGEPPRKLMRGDPGYSSDADLDEYVVEGGTGMHRSAVRGRVEQRMAFADTRTVQMSGAAY-DTFAKQRHAFFVTYKHVAKDREGKAKPIGYGSDAYFLRWLGFPSTRVR---RAAIKALAYLVYDHIGVIIEEAIRRRANAPGDALRSLPSDRPLRTPELQQAQSQIP-----------RLVLPPHHDGLRGIALPKLPTGIRYVGDPRAWPLSADTDAAVSVWRG 471
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog description | expressed unknown protein |
| Ec32 ortholog | Ec-11_004830.1 |
| Exons | 6 |
| Model size | 2430 |
| Cds size | 1593 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig5148.12465.1 >prot_H-paniculata_contig5148.12465.1 ID=prot_H-paniculata_contig5148.12465.1|Name=mRNA_H-paniculata_contig5148.12465.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=531bp
MPPAEKTDKSAVKRKYKRFKLNRNRASGRIAGDGDGQESGTAAVLGGGDN
GSARGSGEPGVEEGKVATLASMEQQLRAGVVPTLPHSREARSALALSLPP
LAPVFSRASRAVTKVVDMGPVEPVRRKRKYTKQNKKAGEWVLVTTWQFSE
KAFRGLSFAKELWMMMTSFGDPRGSIRCKCTKRGNARCPCLAAVAAMESL
VHAFATRLVAVCRQWSCARVFYFKHLRMAMPGEMREFLSWKEAHTKGSVT
PAEEKRAGIQLCSGQDEADGDPEDAKIDVDEVSKVVEGEDGVLLEGKGSF
DSPEDDDISTGVEEKELVVEEEEVTSRILQRKTFADKLTSDMEEGDYVDM
YFEYRKAFFLVSRGGRKDSTPGSRKYFLDFVGLDDKSREAKSRKTLDALA
YMMYDYVGLVVETAIRQRNGGRLVALPEGAPLTEAEINAAAIRIPCLPDR
EQRERVRAMRADNPEGISSKPLSRFAVGLEYRGDPRKWPCNTIERGQVRV
EGGEVVDASDKRLAQEAMALLETDFADFDS* back to topmRNA from alignment at H-paniculata_contig5148:2263..12701+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig5148.12465.1 ID=mRNA_H-paniculata_contig5148.12465.1|Name=mRNA_H-paniculata_contig5148.12465.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=10439bp|location=Sequence derived from alignment at H-paniculata_contig5148:2263..12701+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
TGAAATTATATCCGAAAATCCCCATTACATTGCCCTGTCGGCTTCTGGCT
GTTTTTTATCGGTACCTGCTGTTCTTGCAGTGCTACTTGCGGCGTCAACT
CTAACATAAACAGTGCGTCCCGCTTATTTTTTTACTCGCTTAGGAATTCT
ACACGGACGCCAGCATCAACGAGAAATCTAGCTGCGATGCCGCCAGCGGA
GAAGACTGATAAATCCGCTGTCAAGCGCAAATACAAAAGGTTCAAGCTCA
ACCGAAACAGGGCAAGCGGACGTATCGCCGGTGACGGTGATGGTCAAGAG
AGTGGTACAGCGGCGGTTTTAGGCGGGGGAGATAATGGTTCCGCTCGTGG
GAGTGGGGAGCCCGGAGTGGAAGAAGGAAAGGTGTGCACATTTTAAAGCA
GGTTCTTTGAGTTTTTGGAGCGAAGAAAATGGGCGAGCTGACTTGCTGAC
TTGTTCCTGGTTCAGCTTGATTCAGCGTGTAGGAACGTGTTGGCAGCGTA
ATTGATTCAGATGGTACTGGGACTATCCGCACGTCCTGACTGACTGCAGT
GTTCTCTGGCGGTAGTACTTCCGTGGCACTTGACTGTATACTGACTGCGC
TGCCCTCTGTCTACATTGTAGTGCTCTGTACTGTACTGTACTGTACTGTA
CTGTACTAAAACACTCCCAGCTTCTGATGGGCTAGCCCACGACGAAAATA
TATATATATTGACCGCGGGTCTTGTCGCTTGTTTCTGCTGCTAGGCAACT
CACGTTACACCTACTGCCTCTGTGCGTCCTGCCCGCTTCGCTCGCCTGGT
GCGATGCGCAACCGCCCATATGTTTCGTAACACCTGATATTTTTGCCGAT
CTTTAGCTCGATATCGATACATCGCGATCTAGGATCTGCTGACAAACCAT
ACATCGATTATTAATGCCAATACACAACTCTAATGAAAAGGCTATGGAAG
GTAAGAGACGTTCGCATGGGATTTTCACTTGTCCGGATTACGGTATGCCT
TTGATCTTGACCACGCCATTATACTTGGACATTACAAGTGCTGAAGATCA
ACTCTTTGTCGTAAATTATTCCCAATGACTCGGGAATAGTGTCCTTTCGG
CACCACGTGCAGTGCAGGCTGGGTCATTGCAGCACAGGTACAACGGGATG
CTTATCTCACTTCCCGAAAACACAGGAATCAGGTGGTCATTCTCTTTACG
CCACAAAACGCTGCGTCGCCGCTAAGATAAACATACCTGTCAACGTGCCC
ACCACACCGTACGTACCGAACGGAATCCCGATAAAGCACCAGGACGAGCT
TCAACAAACAAGCCTACCTTCGCGTTTGGTAAGTACTATCGTGATCCCCT
CAACGATTATATCGACCTCCCTCGCATTTTCTACAGTTTACAGTCTTGAG
CGCCCAAGTGAGTAACAATTGACTGAAGTTTTCAACAATATGCGTTGCAC
ATAATAACCATCAACTATCTTACCCCTACAATATTTGTCGAATCCACATA
TCCTCGTGCTCCCTTTCCTCTTTCATGCTCTCCTCACCCACCCCTCCGCG
TCCCCGCTGCCTTCTTCTCTCTACTACATGCGACACACATCACGGACCAA
AGGTGGCTACCCTTGCCTCAATGGAGCAACAGCTACGGGCAGGAGTAGTC
CCCACTCTTCCTCATTCTCGAGAAGCCAGGTCAGCCCTTGCGCTTTCCCT
CCCTCCTCTGGCTCCCGTTTTCTCCAGAGCGTCACGTGCGGTTACCAAAG
TCGTAGATATGGGCCCGGTAGAGCCCGTCCGGCGAAAGCGCAAGTACACG
AAACAAAATAAAAAGGCGGGCGAGTGGGTCCTCGTGACGACCTGGCAGTT
CTCGGAGAAGGCGTTTCGAGGCCTGTCGTTCGCGAAGGAGCTGTGGATGA
TGATGACGTCGTTCGGTGAGGCCGCGCAGGCTGGCGGGGGGAGGCAGGAA
GGGGAAATAGAAAATATATAGTGAGTGGAAGATCACAGTAAGTGAAAATA
TACGGTAGGTGGACAATGTACAACAGAAAACGTGGCCATGATCACCTTGT
ATCAAATTGGAGGTACACTTGGTAATTTTGATGGTGCTCAGTGATTGGAT
CCATAAACCGACGCAAGTTAGGCGGATGAAAGTTGACTCCCCATATAACG
GCAAGTATTCTGTTGCTGCACGAATCAATCATAACGTAAAGATACACAAT
TTTTGAACACCCTGCGCTGGCGTATTTTGGACATAAATTGCCCCCCCCAG
CTTTCCTTACGAAAGGGTTAAATGTATACGTTCCTTGTAGCGCGATTGCT
ACTGCTAGTGTATGTGCGTTGCTTCAGCTTTTTGTGTCCATGGTTATTTT
ATTGGACCATTTGTTTCACTAGACAAAGTATGTTCGCGTTAACTCGGCAA
GTGAGTGAAGAGTATCTCCAACTGATTCAGTCGCGCGTGGCAACGGTTCA
AATGATGTGATTTTGGGGGACGTTACCCTCCAGCTTGCTCCCTTTGTATG
TTCCTTATTTATACGCTCTTATACTGTGGCGATGCAAACGTGCTGTTGCG
CCTTTAGCTGCCCTATGTTCTTTATTGTTCTCGGGCCACACGAGCGCAAC
GAAGCTACGGTCGATGTACGAGTGCCAAACACGTATCCCGGGCTTGGGCA
GTAGCAGCAGCATGCTTCTTTCCCTGCTAGGCTCCTTCGCGGCAACGATG
TTGTTTAACTTGGAAACGAAAAAAACAGCCATCATCATTATCACCGTCAC
CGTCATCACCGTCCATGCGAACACAAGGCCGCAAATCATGATATTGACCT
CTCGGGGTTTTTTTATGTGTCCATTTTGCCGTGCACCATGACAGTTCGTG
ATGTGTGGCATTGTAAAGTGATTTGGCGCAAATCTGTACGCAACGCAATA
TAAAATATAAATGACCAATTACGGGATATTCTCGGGTCCGACGTTACATA
GCTCACTGCTGGCGCTACTGCTTTGTTGGTATTCTGATATCAGGCGACCC
TCGAGGTTCAATCCGGTGCAAGTGCACCAAGCGCGGAAACGCACGATGTC
CGTGCCTCGCTGCCGTCGCTGCCATGGAGTCTCTGGTGCACGCATTCGCA
ACGCGCCTGGTGGCTGTCTGCCGGCAGTGGTCCTGTGCCCGAGTGTTTTA
TTTCAAGCACCTGCGCATGGCCATGCCCGGCGAGGTCAGTCAATTAGCTT
CTTTGTGGTTGAAAGCCCACGTGGGTACCCAACCACACGAAAAATCGCTT
GAATAATATACTTGTGATTCCAAATTCTCGCGAGAAAAGTGAGCGACCGT
CGCCACCCCTATCATCGCGATGGACAAAAGTTTTGGATGAAAGTGTGCGA
AAATTAATTCTGAAGCGATGGTCAACCTCGCCTTATGCAAAAAATTTCGA
GGTGCGTACCGCAATAGTACCAGCCGACGACATGTTCGTAAGTAGTAATG
GGCTGATTTTTTTCTCCCTCCAGGACGCCACATCCCACTGTGTATCTTGT
TGGAATGTGGGCACTCTTGGTGACCCCCTTCGGAACTATTATCTCCTTTC
CGGAGAAAACGCTACATTATTTCCCAACCATGGTGCACACAGTCCATAAA
CATCGGGAAAAGGAGAAAAAAATAGGCCGGCCTTCGAAGAGGAAAATTTC
CCCCGACCAATTCTAAGCCTCTTGTCTCCAGCTTGCCGGGGATGCAAGTC
TCCGCTACAGTTGCAATGCTTGCACCCAAATGTTCAGTTTTCGCTCTTAA
TATCCATTAACCCTGACTATCAGTGCGTAGTACCCTAAAATTACGTTCAA
TCGCCAGGTCATATTAGGCGACTTCATAATAGGGGTTCTCTTAGCATTCA
GGAGTCTGATACCATGGCACAAACAGAAGCCAGCAGCAGGCTACGCACCT
AACCGACTGATATTCTGAGCAACAGAGACCAAGCGTTTTCCCCTCCACAT
TTTGTAAGCAACCTACAATGGCGATGCCAACACAAATTTGCAGCTCAGCT
GCAGCAAGTGCCACAGAGCACGGGTCTCATACAGCCCGCATGATTGCCGA
CTCCGCCGTCACTAGTTGACAGTAGCCAGTAGACACTCAGGGTAACACCA
ATTGCCGTTGTTCTACTATGGACAGTACAGTAGCAGCGGTCGGGACGTAG
CATTGAAGTTTTGAACATACATCTTGCATTGCTTGTGAGATCGGCGGCAG
TATGTAACCTCACGAGCAGAGACCGTTACGTTGAGCGGACAATGTGCTAA
AATTGTTCTCTTTTCGGTTGTCTACCCTCATGAGCGCGTAGCGGAAGTCT
ACCTGCCAGACTACCGTGTACTTTGATCGGGCAAAGTTGGTTTGATATTG
GACAAGCAATCACTCTGCGTGAGAGGTTGTGGTTACGTTCCAATCCAGAC
TGCAGTTTGACACCGGGCGGACTGTCACTCCGAGCAGGCATGCTAAAATG
GCGCACCACGTTGTACGGTATATGCTGAAATGCCGACTGCGTTAATCATG
GACGGGACATTCCGGATGCTTTCCTCGCGCTCTGGGTCTAAGAAATCATG
TACTTGGTGAAAAAATAGAAGATTAACCCCTGAAAATAGCAGCCATATCT
TGATCTCGAGTGGTCAGCGTCAATTCTTCACCCTACACATGATATAATCA
GTCCCAAAAAGGTTAATACACCATATAGTGAATGGTACTGGCTGAGGCGG
TTGCCGATACTCTGAGGATTCATGCTCAGTACGTCATGTCCTTGAACGCC
GTATCTTGCTACGGAAACCCTCAACTGGCGGTTGTCCATGAGCAGGGTCA
GTGTATGCGCCACTGTCCAGTTGATATCAAGCTATTCGTGACACATGGGA
TTGGGTCTCTGTAATACGAATCTCGATGAAAGCGTTCGCTGGTTCTGGTG
CATACCAGTCATGTTTTTTTTTTTTTGTGGCTGTTGTGTCAGTCATTCGA
CCGCCAGTGCAATCGCGCTGTCATCCTTCACTTCGATATGCTTTGCCCAA
CACGCATGTACCTGGTCCTATAGTACTAGCCATATGATTGCAGTATGTAG
CCCCGGCGAAAGGTTATTATGTCTAGCTCATGCAGCATGATGGACTTCGA
ACATATTTTTTCAATACTTTTTTCGGTCGGTTGTTAGAGAATATCGTGAA
AAGGACCTCGCGAGAACTAATTGCATTTTGCGATAACTTGAACAATTTAC
ATGTTGCACGTACACCTACGAGTAAAAAAAAATGGCCTTCTAAGTTGTGC
AGACACGATCACATCCGTCACACGAGAAAAAATATAGAGTAGATGAATGC
AGACCGGTCGCTTTTCTCCCACCACACGTGTAGTTGCTATCCCCTATTTA
AATCTGCTGAAACGTTTCCCCCATCCCCCCCACCCCCTGCGGACAGATGC
GCGAGTTTTTATCTTGGAAAGAGGCCCATACAAAGGGAAGTGTCACGCCA
GCCGAGGAAAAACGAGCGGGGATACAGCTGTGCAGCGGCCAGGACGAGGC
AGATGGTGACCCCGAAGACGCCAAGATAGACGTGGATGAAGTCAGCAAAG
TGGTAGAGGGGGAAGACGGCGTGCTCTTGGAGGGGAAAGGGTCTTTCGAT
TCCCCCGAAGATGATGACATTTCGACCGGTGTGGAAGAGAAGGAGCTTGT
GGTAGAAGAGGAGGAAGTGACTAGCCGCATACTACAACGCAAAGTGAGAA
GGACTTGAAAGAGAAGTGGGGGGTGGGGGAGGGAGGCAGCGGGCTCGGAT
TGAATCAGCTCCCAACATACTTGTATATATACTGTTGAAAAAAAGGTATG
TACACGCGCACATCACCCTATATCCCCTGTTGATCTAGCTTTGCTGATGA
GTGTACACAAGTAATTTTGAGGTGTGAGGTCAGGTGCATACCCCCTCAAC
ATGGGTACATGGAGCTAGGAAGGGAGCGTTAGAGGTTAACCCTCCTTCCT
TACCCCTCTCCCCTTCCCCCAGACTTTTGCGGACAAGCTGACATCCGACA
TGGAGGAAGGAGATTATGTGGACATGTACTTCGAGTACCGCAAGGCATTT
TTCCTTGTGTCACGGGGTGGTCGGAAGGATTCGACCCCGGGGTCTCGCAA
ATATTTTTTGGATTTTGTGGGGCTAGACGACAAGTCGCGGGAAGCCAAGA
GCCGCAAAACCTTGGACGCGCTGGCCTACATGATGTACGACTACGTCGGT
CTGGTGGTGGAAACAGCGATACGGCAAAGGAACGGAGGGCGGTTGGTGGC
TCTCCCAGAAGGTGAGTAGGGGCTTTATGTATGGATCCACTCCCCAAGGT
TTGTGTATGTATACACGGGGAGAGTACGTGTTTTAATGTTGTAAACTAAG
CATAGTTACAGTAGTAGGTGGAAGAAAATACTGCACTCAGTAGTAGAACA
TGCTACTTACTGTATGACGATGGTACGACACAAAAAATCTACAGTTTACC
AAGGATTTTTGTGCGTGTCTGGAATGTGCTGTTTTAGTGTCGTGGTAGTT
CTACTATCCGCTATAGTATGACATTATTACGACTCGAATTCGTACGGGAT
TTTGATGGACTCAACAGAATCCGAGAAGAAAATCGGAAAAGAGTTCTGCG
TTTGACCAGAGAATAACACGTGATATACCGATCTCTTCAAATCCGAGGTG
TTCCAGTACGCTGATCGGAATGTGCCACACGGCAATCGACTCAGTGCCAT
TGACTTCGGGAGGGTAACAACAAACGCGATGCGAATCAGGATAAAACTTA
CCTCGCGAATGGCTTGATGAAGTGTTCGAGATACAGTATTTAGTATTCTG
ATAATTGTATTGAAGATATTAATGTATACGATTTTTCATTTGTTGCACTG
GAGGTGCACGCTAATGCCATCCCAAGAGGTGCACGCTTATGCCGTCCCAG
GAGGTGGGTGTTATCCATCGTGATAGCCTATTGCGGGCTGACGACGCTGT
CCCTGACAAAGTAAGAGGTGGAATTGACCCTAAGAAGAACACATATATCC
TCTTGGAGGAGCCCACGAAAGCCAGCCTACCGCGGAGGGTGATGTTCTCG
TTGGCATCGCCGGTTTTCGACTCGGCATGGTGTGTGATCTCAAATGGGTC
ACATTTTCTATTTCACACAGAATGTCGACAGTGTATCCAAATTACGAACA
CAGCAGACAATCGGTAAGAGAGGGACAACTTATTTTTACAAGGAGGACTA
CCCCCCAGAGGCGGCAATAACAGCTAGCTCTATCTGGCCTTCAAATCGTA
GATACAAGATCGGCGCGTACGGGCGTCAAGGAGGGACAGCATGCTCGCTA
TACTCGTTCCAGGCCGCTTCTTTTGAGAGCAGCACGCCCACGGAGACCAG
TCTACCCTGAAAGCGTGGTGTTTTCATCGGGGGGGAGTTTTTTAATCCTC
TGAAGTTAGGGTACAGCAGTTGTATCCGTAGCTTTGGCGTGTTTAGGGGC
AACGTAATCCGCTCGCAGCGGCCTAAAATTGTGAAAAACAACCCTCCCTG
GCTTCACGTGCGGAGCATGTTTGGTGAGGGTATGCCTCTATTTCATTCCC
GTAGGGAGATACTTTTGTTATCCCTCCATAGCCTACGGTGAGGACGTTAT
AATGGCACCTTTCATGTGTTTAGGGGCAGCGTAGTTCGCCCACAACAGGC
TAAAACGATAGACAACACCGCCTTCCCCCGAGGGATAGAAACGTCCCCTA
TCCCCTGGTCCGGCGTTATGATGAATTTACCTAGTGTTTTGGATGGGTGA
TCGTGGAACTGCTCGTTGGAAAACGTTTTCGGAACGCTTTTCATATTTCT
CATGTGATGAGGAATCCGAGTGTTTTGGCGTATTTTTTGTTGTACTAAGC
GTCAAAATTGCGAAATTGCGATAGAGTACTGATTAGTGCACCGAAAACTG
GGCGTGAGCATGGCTAGTGGCACTGAAGTATTCAAGTACAAGGTATTGAT
GCTCGCCTCTGCAAACAGTACAAGCTGGGCAGACCAAGAAACCCATATTG
CTTCGGACAATTATATCTTCTCAACTACTAGGGTTCAGATCAAAAAGAAA
GCATTGTTGCAATCGGCCAATCAACGCGCATGTACAGAGCTACCTGCCTA
GCCCATTAAAATTGGTTCTACAATTTTGAAGTTAGCTGCCCAACCAGCGT
GTAAGGATGTTGGTGTTAAAACCGTTTTTTTTGCGGCGCAATGAGAATCA
TGCGGTACAAAAGTGCCCGAATCAGGGACACCCCAAGCCCACGCGCTGCG
ACATGGCTACGAGCGTACCAGTAGGTCAGCAGCGGCAGAGGGCATCAGTC
CCTACGATTGTGCACGACAAGGTCAAGGGGACGTATCGGTTGAAGCTGAG
ATTGAATGTGTGCTGCATTGGCATAAGATCGGACACTGACAAATTGTAGA
TTATTAACAGTTGTTCTGGTGTTTGTACAAGTTTGTACCCCTAAGAATAA
CGCGATAGATAGTGATTATAAAATTTAAAGGTCATTTCATATGATCCAAC
AGCGGCATCGGTTTCACATCGAAGGGAATATTTTGTACTGCATGTTGCCA
ACGTCAAACCTCCGTGGAACATATCTTACCCACCGACCTGGATCTCGATG
CGAGCGTCGGCGTAATTTTCCTCGTCGTAATATAGTATTGTACAATATGC
ATACCGTATAACTAACTGTGTACACCACAAAAGACTGTGGAAAAATCGGA
CTGATCAACTCAATTTATCGAATTTTGTCCTAAAATGTTGACACATGATT
TGCAATACACTCGCCGAGACATTCGAATAAGGTCATTGCTTTTTTTTGTG
TGTTTTTCGTCAAGTTACGGCTAAACGAAACACCCACATGAATCGAAAGT
CGACCATAAATGGACGAAACAAAAAAAAACACATTTACCTTATTCGAATG
TCTCGGCGAGTGTGTTGCAAATCACGTGTCAAAATTTCAGGACAAAATTC
GACAAATTGAGCTCCCCAGCCCGATTCTGCTGTTTTAGCTTCGTCGGCTC
AGGTTGTAGTACAGAAGATCTTTTGTCTGAACAAAGCGGGAACCTCCCGC
GACCGTTACAGATCTATTCCGCATGGAACAGTAGTCGAGTATGACATATG
AGCGTTGGTATCGTGTTCGGGCGCCTTTTGACTTCCTTTGTCTTTTCGCC
TTTCTTGCTGAAGTGCCAGCCCCATCCCGAGTCCCATGTTGTGCGGTGTA
TTCCTATGTTCAAATGTGCATACAAGCGAGTACCAACCATTATCGAGCCG
AATATCAAACCCTCTCCTGTAGTCGAAACTCTCTCGTACATGATCTGCTT
GAGCAGCACGACTTATATATACTAGGTACATTTTAGTGCAGGCGGTCGAG
GACTGTAATACCGTCGTGTACATTCTCCCTTGATTGAATTGTGAATGTTA
TTTCCCGAACATGGATGGACCGCTCTCTTTTGTCGGCAACTGCTGTACAC
TTGTATCCACTGTGTCATTCGACAAAGCAGGCGCCCCCCTGACGGAAGCT
GAAATCAACGCTGCTGCTATCAGAATACCGTGCCTTCCCGACCGCGAACA
GCGTGAGCGAGTGCGTGCTATGCGCGCAGATAATCCGGAAGGGATATCAA
GCAAACCCTTGTCGCGGTTCGCGGTAGGGTTGGAATACAGGGGAGATCCA
CGTAAATGGCCGTGCAATACGATCGAGAGGGGCCAAGTGCGCGTTGAGGG
TGGGGAAGTCGTAGATGCTTCGGACAAGAGACTTGCGCAAGAAGCGATGG
CACTGCTCGAGACGGACTTCGCCGATTTTGACTCTTGATGGGTTGTAGTT
CAAGACGAAAGGATGACAAATATTGTAGACACCGTAACGAGTTGAAATGT
CAGGCGTTCATATATGCACACATAGCGAGGTCCTGATTTGATGATTTTTG
TCTCCCCGGGCCACAAAGAGACGAGTATCAATTCTGCACCATACTTGGGA
CCCGTCTGCCTAGGGTGGGATTAATAGGTCGTGTTGTCAGTCTGTCGATA
AACGTGTATGTGTCGGGCATGCTGTGTGGAGCAAGAAACCGACGATATTG
CCAGGCCTATTTCGGACGGTTCGTCGCAACAAAATTGCTGCTGCTCCAAC
GAATACTATGGATGTATAGTGAAATCCTGGCATACTGAATACAGGTGATC
TATGGTTATAGGGAAAATCGAACCGAAACAATTTTTCGAACTGTCACGGG
CAAATTGGATTTTTTTCATTGGCGGAAATTTGGATTTGTGAGCAAACGTT
GGTACACAGGGAAGGGGTTAGTTATAGTAGATGATGCTCAATATTCACTG
CTATGCTTATCTGAAGTTGTTAGCCCGGACGATGCTTTCATCTTTTTCGT
GCCCCCAAGAAACGATGCTGAAAATACGTTGTTCTCTACGTCCTATATCT
TCAAGTACAGCAATATTGTGTCAGATATTGAAAAACGAG back to topCoding sequence (CDS) from alignment at H-paniculata_contig5148:2263..12701+ >mRNA_H-paniculata_contig5148.12465.1 ID=mRNA_H-paniculata_contig5148.12465.1|Name=mRNA_H-paniculata_contig5148.12465.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3186bp|location=Sequence derived from alignment at H-paniculata_contig5148:2263..12701+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCCGCCAGCGGAGAAGACTGATAAATCCGCTGTCAAGCGCAAATACAA
AAGGTTCAAGCTCAACCGAAACAGGGCAAGCGGACGTATCGCCGGTGACG
GTGATGGTCAAGAGAGTGGTACAGCGGCGGTTTTAGGCGGGGGAGATAAT
GGTTCCGCTCGTGGGAGTGGGGAGCCCGGAGTGGAAGAAGGAAAGATGCC
GCCAGCGGAGAAGACTGATAAATCCGCTGTCAAGCGCAAATACAAAAGGT
TCAAGCTCAACCGAAACAGGGCAAGCGGACGTATCGCCGGTGACGGTGAT
GGTCAAGAGAGTGGTACAGCGGCGGTTTTAGGCGGGGGAGATAATGGTTC
CGCTCGTGGGAGTGGGGAGCCCGGAGTGGAAGAAGGAAAGGTGGCTACCC
TTGCCTCAATGGAGCAACAGCTACGGGCAGGAGTAGTCCCCACTCTTCCT
CATTCTCGAGAAGCCAGGTCAGCCCTTGCGCTTTCCCTCCCTCCTCTGGC
TCCCGTTTTCTCCAGAGCGTCACGTGCGGTTACCAAAGTCGTAGATATGG
GCCCGGTAGAGCCCGTCCGGCGAAAGCGCAAGTACACGAAACAAAATAAA
AAGGCGGGCGAGTGGGTCCTCGTGACGACCTGGCAGTTCTCGGAGAAGGC
GTTTCGAGGCCTGTCGTTCGCGAAGGAGCTGTGGATGATGATGACGTCGT
TCGGTGGCTACCCTTGCCTCAATGGAGCAACAGCTACGGGCAGGAGTAGT
CCCCACTCTTCCTCATTCTCGAGAAGCCAGGTCAGCCCTTGCGCTTTCCC
TCCCTCCTCTGGCTCCCGTTTTCTCCAGAGCGTCACGTGCGGTTACCAAA
GTCGTAGATATGGGCCCGGTAGAGCCCGTCCGGCGAAAGCGCAAGTACAC
GAAACAAAATAAAAAGGCGGGCGAGTGGGTCCTCGTGACGACCTGGCAGT
TCTCGGAGAAGGCGTTTCGAGGCCTGTCGTTCGCGAAGGAGCTGTGGATG
ATGATGACGTCGTTCGGCGACCCTCGAGGTTCAATCCGGTGCAAGTGCAC
CAAGCGCGGAAACGCACGATGTCCGTGCCTCGCTGCCGTCGCTGCCATGG
AGTCTCTGGTGCACGCATTCGCAACGCGCCTGGTGGCTGTCTGCCGGCAG
TGGTCCTGTGCCCGAGTGTTTTATTTCAAGCACCTGCGCATGGCCATGCC
CGGCGAGGCGACCCTCGAGGTTCAATCCGGTGCAAGTGCACCAAGCGCGG
AAACGCACGATGTCCGTGCCTCGCTGCCGTCGCTGCCATGGAGTCTCTGG
TGCACGCATTCGCAACGCGCCTGGTGGCTGTCTGCCGGCAGTGGTCCTGT
GCCCGAGTGTTTTATTTCAAGCACCTGCGCATGGCCATGCCCGGCGAGAT
GCGCGAGTTTTTATCTTGGAAAGAGGCCCATACAAAGGGAAGTGTCACGC
CAGCCGAGGAAAAACGAGCGGGGATACAGCTGTGCAGCGGCCAGGACGAG
GCAGATGGTGACCCCGAAGACGCCAAGATAGACGTGGATGAAGTCAGCAA
AGTGGTAGAGGGGGAAGACGGCGTGCTCTTGGAGGGGAAAGGGTCTTTCG
ATTCCCCCGAAGATGATGACATTTCGACCGGTGTGGAAGAGAAGGAGCTT
GTGGTAGAAGAGGAGGAAGTGACTAGCCGCATACTACAACGCAAAATGCG
CGAGTTTTTATCTTGGAAAGAGGCCCATACAAAGGGAAGTGTCACGCCAG
CCGAGGAAAAACGAGCGGGGATACAGCTGTGCAGCGGCCAGGACGAGGCA
GATGGTGACCCCGAAGACGCCAAGATAGACGTGGATGAAGTCAGCAAAGT
GGTAGAGGGGGAAGACGGCGTGCTCTTGGAGGGGAAAGGGTCTTTCGATT
CCCCCGAAGATGATGACATTTCGACCGGTGTGGAAGAGAAGGAGCTTGTG
GTAGAAGAGGAGGAAGTGACTAGCCGCATACTACAACGCAAAACTTTTGC
GGACAAGCTGACATCCGACATGGAGGAAGGAGATTATGTGGACATGTACT
TCGAGTACCGCAAGGCATTTTTCCTTGTGTCACGGGGTGGTCGGAAGGAT
TCGACCCCGGGGTCTCGCAAATATTTTTTGGATTTTGTGGGGCTAGACGA
CAAGTCGCGGGAAGCCAAGAGCCGCAAAACCTTGGACGCGCTGGCCTACA
TGATGTACGACTACGTCGGTCTGGTGGTGGAAACAGCGATACGGCAAAGG
AACGGAGGGCGGTTGGTGGCTCTCCCAGAAGACTTTTGCGGACAAGCTGA
CATCCGACATGGAGGAAGGAGATTATGTGGACATGTACTTCGAGTACCGC
AAGGCATTTTTCCTTGTGTCACGGGGTGGTCGGAAGGATTCGACCCCGGG
GTCTCGCAAATATTTTTTGGATTTTGTGGGGCTAGACGACAAGTCGCGGG
AAGCCAAGAGCCGCAAAACCTTGGACGCGCTGGCCTACATGATGTACGAC
TACGTCGGTCTGGTGGTGGAAACAGCGATACGGCAAAGGAACGGAGGGCG
GTTGGTGGCTCTCCCAGAAGGCGCCCCCCTGACGGAAGCTGAAATCAACG
CTGCTGCTATCAGAATACCGTGCCTTCCCGACCGCGAACAGCGTGAGCGA
GTGCGTGCTATGCGCGCAGATAATCCGGAAGGGATATCAAGCAAACCCTT
GTCGCGGTTCGCGGTAGGGTTGGAATACAGGGGAGATCCACGTAAATGGC
CGTGCAATACGATCGAGAGGGGCCAAGTGCGCGTTGAGGGTGGGGAAGTC
GTAGATGCTTCGGACAAGAGACTTGCGCAAGAAGCGATGGCACTGCTCGA
GACGGACTTCGCCGATTTTGACTCTTGAGCGCCCCCCTGACGGAAGCTGA
AATCAACGCTGCTGCTATCAGAATACCGTGCCTTCCCGACCGCGAACAGC
GTGAGCGAGTGCGTGCTATGCGCGCAGATAATCCGGAAGGGATATCAAGC
AAACCCTTGTCGCGGTTCGCGGTAGGGTTGGAATACAGGGGAGATCCACG
TAAATGGCCGTGCAATACGATCGAGAGGGGCCAAGTGCGCGTTGAGGGTG
GGGAAGTCGTAGATGCTTCGGACAAGAGACTTGCGCAAGAAGCGATGGCA
CTGCTCGAGACGGACTTCGCCGATTTTGACTCTTGA back to top
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