mRNA_H-paniculata_contig11960.1246.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig11960.1246.1 vs. uniprot
Match: A0A6H5KHB5_9PHAE (FGE-sulfatase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHB5_9PHAE) HSP 1 Score: 187 bits (474), Expect = 4.620e-54 Identity = 84/112 (75.00%), Postives = 96/112 (85.71%), Query Frame = 2 Query: 5 DAVLIHSVIDAVPSPGSLLARMGGARGLVRKRGGIVVVVSGYNWNEEVTPREAWLGGYLDDKGNQVLSVEGISKGLGEDFKLVHTETVPCMRPLTDRAFEYASAEATIWRRD 340 DA LIHS IDA+PSP LL RMGGARG+VR+ GG+ VVVS Y WNE+VTP AW+GGYLDD GN+V S++G+S+GLGEDFKLVH E VPCMRPLTDR FEYASAEAT+WRRD Sbjct: 325 DAALIHSTIDAIPSPNGLLGRMGGARGIVRENGGVAVVVSAYEWNEDVTPEGAWVGGYLDDDGNEVPSIQGLSRGLGEDFKLVHVERVPCMRPLTDRTFEYASAEATVWRRD 436
BLAST of mRNA_H-paniculata_contig11960.1246.1 vs. uniprot
Match: D7FTN7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTN7_ECTSI) HSP 1 Score: 187 bits (476), Expect = 7.920e-52 Identity = 84/112 (75.00%), Postives = 97/112 (86.61%), Query Frame = 2 Query: 5 DAVLIHSVIDAVPSPGSLLARMGGARGLVRKRGGIVVVVSGYNWNEEVTPREAWLGGYLDDKGNQVLSVEGISKGLGEDFKLVHTETVPCMRPLTDRAFEYASAEATIWRRD 340 DA LIHS IDA+PSP LL RMGGARG+VR+ GG+VVVVS Y WNE+VTP AWLGGYLD+ GN+V S++G+S+GLG+DFKLVH E VPCMRPLTDR FEYASAEAT+WRRD Sbjct: 755 DAALIHSTIDAIPSPNGLLGRMGGARGIVRENGGVVVVVSAYEWNEDVTPERAWLGGYLDEDGNEVPSIQGLSRGLGDDFKLVHVERVPCMRPLTDRTFEYASAEATVWRRD 866
BLAST of mRNA_H-paniculata_contig11960.1246.1 vs. uniprot
Match: F2USG2_SALR5 (Generic methyltransferase n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2USG2_SALR5) HSP 1 Score: 107 bits (267), Expect = 1.620e-23 Identity = 55/111 (49.55%), Postives = 77/111 (69.37%), Query Frame = 2 Query: 2 FDAVLIHSVIDAVPSPGSLLARMGGARGLVRKRGGIVVVVSGYNWNEEVTPREAWLGGYLDDKGNQVLSVEGISKGLGEDFKLVHTETVPCMRPLTDRAFEYASAEATIWR 334 F AVL +V+D + SPG+LL+R+GGARGLVR GGI+V+ S Y W E+ TP++ W+GG+ +GN V S++G+ LGE+F+L+ T VP R FEY +EAT+WR Sbjct: 757 FSAVLAANVLDRLSSPGTLLSRLGGARGLVRP-GGILVLSSPYTWMEQYTPKDLWIGGHETPEGN-VRSLDGLKAALGENFELLRTTQVPLAIREHARKFEYVISEATVWR 865
BLAST of mRNA_H-paniculata_contig11960.1246.1 vs. uniprot
Match: A9UT82_MONBE (Predicted protein n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9UT82_MONBE) HSP 1 Score: 95.1 bits (235), Expect = 3.040e-19 Identity = 50/111 (45.05%), Postives = 72/111 (64.86%), Query Frame = 2 Query: 2 FDAVLIHSVIDAVPSPGSLLARMGGARGLVRKRGGIVVVVSGYNWNEEVTPREAWLGGYLDDKGNQVLSVEGISKGLGEDFKLVHTETVPCMRPLTDRAFEYASAEATIWR 334 FDAV++ +V+D + SPGSLL R+GGARGLV K GG++ V S ++W E TP++ WLGG G +V S++ + L ++F+L+ +P M R FEY A AT+WR Sbjct: 715 FDAVVVANVLDRLSSPGSLLGRLGGARGLV-KPGGLLFVSSPFSWMERYTPKDLWLGGRETFDG-EVSSIDTLHASLNDNFELLEVMDMPFMLREHARKFEYVKAYATVWR 823
BLAST of mRNA_H-paniculata_contig11960.1246.1 vs. uniprot
Match: UPI0019C6AA6A (5-histidylcysteine sulfoxide synthase n=1 Tax=Candidatus Sericytochromatia bacterium TaxID=2762020 RepID=UPI0019C6AA6A) HSP 1 Score: 92.4 bits (228), Expect = 2.610e-18 Identity = 47/112 (41.96%), Postives = 73/112 (65.18%), Query Frame = 2 Query: 2 FDAVLIHSVIDAVPSPGSLLARMGGARGLVRKRGGIVVVVSGYNWNEEVTPREAWLGGYLDDKGNQVLSVEGISKGLGEDFKLVHTETVPCMRPLTDRAFEYASAEATIWRR 337 FDAVL+ ++I +PSP SLL+R+GG RGLVR GGI+V+ + ++W E+ +PRE WLGGY+ + G V S + + L ++F+LV +P + R ++Y T+W+R Sbjct: 702 FDAVLMANLICRLPSPNSLLSRLGGPRGLVRP-GGILVMTTPFSWLEQFSPREVWLGGYIAN-GEPVWSKDTLHAALADEFELVSAHDMPLVIREHARKYQYIVTYTTVWKR 811
BLAST of mRNA_H-paniculata_contig11960.1246.1 vs. uniprot
Match: A0A1N6U6K0_9RHOO (5-histidylcysteine sulfoxide synthase/putative 4-mercaptohistidine N1-methyltranferase n=6 Tax=Rhodocyclales TaxID=206389 RepID=A0A1N6U6K0_9RHOO) HSP 1 Score: 87.0 bits (214), Expect = 1.910e-16 Identity = 48/113 (42.48%), Postives = 70/113 (61.95%), Query Frame = 2 Query: 2 FDAVLIHSVIDAVPSPGSLLARMGGARGLVRKRGGIVVVVSGYNWNEEVTPREAWLGGYLDDKGNQVLSVEGISKGLGED-FKLVHTETVPCMRPLTDRAFEYASAEATIWRR 337 +DAVL+ +++ +PSP SLL R+GG RGLVR GG+V ++S Y W E+ TPR AWLGGY+D + V S + + LG D F+L +P + R ++Y A +W+R Sbjct: 681 YDAVLLANLLCRLPSPKSLLGRLGGPRGLVRT-GGVVAILSPYTWLEQFTPRGAWLGGYMDGE-RAVRSADTLKTLLGADGFELRREAEMPLVIREHARKYQYIVTHAMLWQR 791
BLAST of mRNA_H-paniculata_contig11960.1246.1 vs. uniprot
Match: UPI0009A4A0BE (5-histidylcysteine sulfoxide synthase n=1 Tax=Zoogloea sp. LCSB751 TaxID=1965277 RepID=UPI0009A4A0BE) HSP 1 Score: 85.9 bits (211), Expect = 4.810e-16 Identity = 50/114 (43.86%), Postives = 69/114 (60.53%), Query Frame = 2 Query: 2 FDAVLIHSVIDAVPSPGSLLARMGGARGLVRKRGGIVVVVSGYNWNEEVTPREAWLGGYLDDKGNQVLSVEGISKGLG-EDFKLVHTETVPCMRPLTDRAFEYASAEATIWRRD 340 FDAVL+ +++ +PSP SLL R+GG RGLV K GG+V + S Y+W E+ TPREAWLGGY D G V S + + L E F L E VP + R +++ +W+R+ Sbjct: 687 FDAVLLANLLCRLPSPMSLLGRLGGQRGLV-KVGGLVALFSPYSWLEQFTPREAWLGGYEKD-GQAVRSADTLKAFLAAEGFVLRREEEVPLVIREHARKYQFIVTHGMLWQRE 798
BLAST of mRNA_H-paniculata_contig11960.1246.1 vs. uniprot
Match: UPI00145CB687 (5-histidylcysteine sulfoxide synthase n=1 Tax=Aromatoleum petrolei TaxID=76116 RepID=UPI00145CB687) HSP 1 Score: 85.1 bits (209), Expect = 8.880e-16 Identity = 48/113 (42.48%), Postives = 69/113 (61.06%), Query Frame = 2 Query: 2 FDAVLIHSVIDAVPSPGSLLARMGGARGLVRKRGGIVVVVSGYNWNEEVTPREAWLGGYLDDKGNQVLSVEGISKGLGED-FKLVHTETVPCMRPLTDRAFEYASAEATIWRR 337 +DAVL+ +++ +PSP SLL R+GG RGLVR GG+V ++S Y W E+ TPR AWLGGY+D V S + + LG D F+L +P + R ++Y A +W+R Sbjct: 681 YDAVLLANLLCRLPSPKSLLGRLGGPRGLVRT-GGVVAILSPYTWLEQFTPRGAWLGGYMDGDC-AVRSADVLRALLGADGFELRREAEIPLVIREHARKYQYIVTHAMLWQR 791
BLAST of mRNA_H-paniculata_contig11960.1246.1 vs. uniprot
Match: W6MAJ6_9GAMM (Uncharacterized protein n=2 Tax=Candidatus Competibacteraceae TaxID=1400857 RepID=W6MAJ6_9GAMM) HSP 1 Score: 84.7 bits (208), Expect = 1.210e-15 Identity = 50/113 (44.25%), Postives = 68/113 (60.18%), Query Frame = 2 Query: 2 FDAVLIHSVIDAVPSPGSLLARMGGARGLVRKRGGIVVVVSGYNWNEEVTPREAWLGGYLDDKGNQVLSVEGISKGLG-EDFKLVHTETVPCMRPLTDRAFEYASAEATIWRR 337 FDAVL+ +++ +PSP SLL R+GG RGLV K GG++ V S Y+W + TP EAWLGGY D G + S +S L E F+L+ VP + R ++Y A +WRR Sbjct: 695 FDAVLLANLLCRLPSPKSLLGRLGGPRGLV-KPGGLLAVFSPYSWLPQFTPPEAWLGGYERD-GQPINSAVALSALLAAEGFELLRETDVPLVIREHARKYQYIVTHAGLWRR 805
BLAST of mRNA_H-paniculata_contig11960.1246.1 vs. uniprot
Match: A0A1W1E8Q7_9ZZZZ (Conserved domain protein n=1 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A1W1E8Q7_9ZZZZ) HSP 1 Score: 80.9 bits (198), Expect = 1.890e-15 Identity = 40/112 (35.71%), Postives = 70/112 (62.50%), Query Frame = 2 Query: 2 FDAVLIHSVIDAVPSPGSLLARMGGARGLVRKRGGIVVVVSGYNWNEEVTPREAWLGGYLDDKGNQVLSVEGISKGLGEDFKLVHTETVPCMRPLTDRAFEYASAEATIWRR 337 FD VL ++I+ +P+P L M +RK GG++++ S Y W E++TP+ W+GGY+D+ G +V S+ G+ + L DFKL+ T+ +P + T R + ++ A+ ++W R Sbjct: 99 FDLVLAANLIERLPNPVEFLKSMPQR---IRK-GGMLILTSTYTWQEKLTPKAYWIGGYIDN-GKEVTSLHGLQRLLEADFKLLDTQDIPFVFQETAREYRHSVAQMSVWER 205 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig11960.1246.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig11960.1246.1 >prot_H-paniculata_contig11960.1246.1 ID=prot_H-paniculata_contig11960.1246.1|Name=mRNA_H-paniculata_contig11960.1246.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=92bp MGGARGLVRKRGGIVVVVSGYNWNEEVTPREAWLGGYLDDKGNQVLSVEGback to top mRNA from alignment at H-paniculata_contig11960:4889..7332- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig11960.1246.1 ID=mRNA_H-paniculata_contig11960.1246.1|Name=mRNA_H-paniculata_contig11960.1246.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2444bp|location=Sequence derived from alignment at H-paniculata_contig11960:4889..7332- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig11960:4889..7332- >mRNA_H-paniculata_contig11960.1246.1 ID=mRNA_H-paniculata_contig11960.1246.1|Name=mRNA_H-paniculata_contig11960.1246.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=552bp|location=Sequence derived from alignment at H-paniculata_contig11960:4889..7332- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |