mRNA_H-paniculata_contig5144.12459.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig5144.12459.1 vs. uniprot
Match: D8LQ25_ECTSI (Transposase n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LQ25_ECTSI) HSP 1 Score: 418 bits (1074), Expect = 3.280e-135 Identity = 273/620 (44.03%), Postives = 356/620 (57.42%), Query Frame = 1
Query: 1 AKGKLDT--TNWVKMVKVKEAAIKARXXXXXXXXXXXKAAHEAARPKLKQRLPDARQILPALEQRKMSAWQPRDELAPQQGALLGTSQSRAILLVYFNLVQSGMDQNPPVRETARVMRIGPKKIFKVHTLWEDQKSLKTTSAEGRGMENGQNGRTVVTDLQTLKLCAFISGKHQDGQQVFRRTESE*VRAECDYDMLNAAIGGLLYRLGYRRRRERIKIPPRNKARKTRIRQFLVELSGALTEKEEQMAVIVYIDESFCHQLHGFAYS*FFTDDDGVVQDGMGRTSEKSMRLIVVHAIPRHGPLKTLIRVYLSRRDG---PKLRPRGTVSREKGQWKQRKPLRCSGRPNRLQWITTLA*PTKCSWSGSRIALSRL*KLLSQERR*CLFSTMHRT----------------TTNMTLRSGCLKRTPRRTIQHCCASTRPK*SQFGVWKGR*RSTEKLSSTISKYARVDRSRTRAQSVAMVLAVRS*RWPLGCCFSSSLSTSF*EKVEVFMKSKGWQLIWTLLYMASSQPIELFWQHGKQYFSFNFDTKRTMKQVWEKVRKGWYRDDQW*ETIGGWKAAIRGKLVSHAVNEMNTWVRNESILNGKMDALK-VPDDHDFSGPG 1794
AKGK T N M++ KEAA+ XXXXXXXXXXX K +Q+ P+A P E R+ A Q RD+LAP+ G+LL TSQSR+ILL YF LVQSG++ N V+ TA +R+G K+FKV W ++ L T+SAEGRG+ +G++GR ++ D+Q L AFIS KH++GQQVFRRT E ++ C+ D+ N A+GGLLYR+GYRRRR RIKIPP N RK RIR+FLVE+S ALT++E++ AVIVY+DESFCHQLHG AYS F TDDDGVVQDGMGRTS K +R+I+VHAI + G L + +G PK + +G ++ + + + + W R+A + K +++ L + + T + + C K T R + A R K F V +T SK + + LA R+ F T EKVE FM +GWQLIWT YM S QPIELFWQHGKQY SFNF TKRTM +VW +VRKGWY D W GGWK A KLV+HAV EMN WV ++ +L G+M AL+ +P+ ++ PG
Sbjct: 16 AKGKTRTEKANLANMLRAKEAALAVXXXXXXXXXXXXXXXXXXXXXKQQQQGPEADTGAPQQEAREQQAAQQRDDLAPRTGSLLDTSQSRSILLTYFELVQSGVEPNKAVQRTASTLRVGKDKVFKVRAHWWEKTELLTSSAEGRGVSSGKDGRKLLDDVQCANLRAFISDKHENGQQVFRRTVREWIKETCNKDLSNRAVGGLLYRIGYRRRRGRIKIPPLNDDRKARIRRFLVEMSAALTQEEKEEAVIVYMDESFCHQLHGSAYSYFLTDDDGVVQDGMGRTSGKGLRMIMVHAITKGGALAAVDENNFPIPEGWFKPKDKGKGRQGAGSMGTEETAEMLWQAKRATGDYHDAMTDKMFMEWLERRLAPAFKAKYGNKKMILVLDNASYHHGYDAEVGVPESNSKGYNTALLRKYKCRKITVEREVTSS-AGVRSKKYTFQV-----PATGTFPQANSKCGK------GVSGPEVALATRA-------FFQLKHPTKLMEKVETFMNGRGWQLIWTPPYMPSFQPIELFWQHGKQYVSFNFKTKRTMAEVWAQVRKGWYGDPTWEGQKGGWKPADCSKLVAHAVKEMNKWVASDPVLRGQMGALEEIPESYEDDAPG 616
BLAST of mRNA_H-paniculata_contig5144.12459.1 vs. uniprot
Match: D8LNM6_ECTSI (DDE_3 domain-containing protein n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LNM6_ECTSI) HSP 1 Score: 293 bits (751), Expect = 4.370e-87 Identity = 195/536 (36.38%), Postives = 281/536 (52.43%), Query Frame = 1
Query: 217 ELAPQQGALLGTSQSRAILLVYFNLVQSGMDQNPPVRETARVMRIGPKKIFKVHTLWEDQKSLKTTSAEGRG-MENGQNGRTVVTDLQTLKLCAFISGKHQDGQQVFRRTESE*VRAECDYDM-LNAAIGGLLYRLGYRRRRERIKIPPRNKARKTRIRQFLVELSGALTEKEEQMAVIVYIDESFCHQLHGFAYS*FFTDDDGVVQDGMGRTSEKSMRLIVVHAIPRHGPLKTLIRVYLSRRDGPKLRPRGTVSREKGQWKQRKPLRCSGRPNRLQWITTLA*PTKCSWSGSRI--ALSRL*KLLSQERR*CLFSTMHRTTTNMTLRSGC---LKRTPRRTIQHCCASTRPK*SQFGVWKGR*RSTEKLSSTISKYARVDR-------SRTRAQSVAMVLAVRS*RWPLGCCFSSSLSTSF*EKVEVFMKSKGWQLIWTLLYMASSQPIELFWQHGKQYFSFNFDTKRTMKQVWEKVRKGWYRDDQW*ETIGGWKAAIRGKLVSHAVNEMNTWVRNESI-LNGKMDALKVPDDHD 1779
E+ P++G + QSR +L++ F+L + G +N V + AR +IG K+ +++ W D + L T+A GRG M +GR +T++Q +L FI+ +H+ G+QVFRRT +E V C+ + N ++GGLL RLGY+RRR RIK PP N R RIR+FLVE+ A ++ +AVIVY+DESF HQ HG YS F +D++GVVQDG+GRT+ K +R+I+VHAI + GPL + K G E + + + + + + W R+ A + + + ++ M N + G +K T +H R +FG R + E + V + R V+ + R + + L E+V FMK KGW LIWT YM S QPIELFWQHGKQY S NF+ KR M++VW ++R+GWY D +W GGWKAA KLV HA+ EMN WVR+ L+GK+ L+ PD +D
Sbjct: 124 EVKPKKGEVWTHLQSRMVLMLLFDLRKEGRSENEAVLQVARTFKIGHDKVRRINNHWWDHRQLYETTAAGRGKMAKEDDGRRRLTEVQADQLREFINDEHKAGRQVFRRTVAEWVHRTCNMEQPSNRSVGGLLSRLGYKRRRGRIKTPPLNAERLARIRRFLVEMDMAKRAEDAGLAVIVYMDESFVHQAHGSPYSYFPSDENGVVQDGIGRTTGKGLRMIMVHAITKWGPLAKFCDGFPIEEGWFKETGSGKKKMEDEETAE---FLWQAKLAKGDYHAAMTDSMFMEWLEHRLSPAYNAIPEFEGKK--------MILVLDNASYHHGFDAEVKVPETNTKKHNVDLLR----KFGAKSIRVKRKEGEQGFVEHNFEVPSEPGSSFPAGNREGGVSRAEVATATREYIRLNYPERLE----ERVVTFMKKKGWALIWTPPYMPSFQPIELFWQHGKQYVSLNFELKRKMREVWVQIRQGWYGDKEWSGQEGGWKAANCSKLVEHAIGEMNKWVRDRDAGLSGKIGNLQKPDGYD 640
BLAST of mRNA_H-paniculata_contig5144.12459.1 vs. uniprot
Match: A0A6H5KZM0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZM0_9PHAE) HSP 1 Score: 284 bits (727), Expect = 1.180e-86 Identity = 142/240 (59.17%), Postives = 183/240 (76.25%), Query Frame = 1
Query: 187 RKMSAWQPRDELAPQQGALLGTSQSRAILLVYFNLVQSGMDQNPPVRETARVMRIGPKKIFKVHTLWEDQKSLKTTSAEGRGMENGQNGRTVVTDLQTLKLCAFISGKHQDGQQVFRRTESE*VRAECDYDMLNAAIGGLLYRLGYRRRRERIKIPPRNKARKTRIRQFLVELSGALTEKEEQMAVIVYIDESFCHQLHGFAYS*FFTDDDGVVQDGMGRTSEKSMRLIVVHAIPRHGPL 906
R+ A Q RD+LAP+ G+LL SQSR+ILL YF LVQSG++ N V+ TA +R+G K+FKV W ++ L +SAEGRG+ +G++GR ++ D+Q L AFIS KH++GQQVFRRT E ++ C+ D+ N A+GGLLYR+GYRRR RIKIPP N RK RIR+FLVE+S ALT++E++ AVIVY+DESFCHQLHG AYS F TDD+GVVQDGMGRTS K +R+I+VHAI + G L
Sbjct: 80 REQQAAQQRDDLAPKTGSLLDISQSRSILLTYFELVQSGVEPNKAVQRTAATLRVGKDKVFKVRAHWWEKTELLASSAEGRGVSSGKDGRKLLDDVQCASLRAFISDKHENGQQVFRRTVREWIKERCNKDLSNRAVGGLLYRIGYRRRGGRIKIPPLNDDRKARIRRFLVEMSAALTQEEKEEAVIVYMDESFCHQLHGSAYSYFLTDDNGVVQDGMGRTSGKGLRMIMVHAITKGGAL 319
BLAST of mRNA_H-paniculata_contig5144.12459.1 vs. uniprot
Match: A0A6H5KDX2_9PHAE (Uncharacterized protein n=8 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDX2_9PHAE) HSP 1 Score: 290 bits (742), Expect = 4.170e-86 Identity = 196/549 (35.70%), Postives = 273/549 (49.73%), Query Frame = 1
Query: 220 LAPQQGALLGTSQSRAILLVYFNLVQSGMDQNPPVRETARVMRIGPKKIFKVHTLWEDQKSLKTTSAEGRGMENG-QNGRTVVTDLQTLKLCAFISGKHQDGQQVFRRTESE*VRAECDYDMLNAAIGGLLYRLGYRRRRERIKIPPRNKARKTRIRQFLVELSGALTEKEEQMAVIVYIDESFCHQLHGFAYS*FFTDDDGVVQDGMGRTSEKSMRLIVVHAIPRHGPLKTLIRVYLSRRDGPKLRPRGTVSREKGQWKQRKPLRCSGRPNRLQWITTLA*PTKCSWSGSRIALSRL*KLLSQERR*CLFSTM------HRTTT--NMTLRSGCLKRTPRRTIQHCCASTRPK*SQFGVWKGR*RSTEKLSSTISKYAR---------------------VDRSRTRAQSVAMVLAVRS*RWPLGCCFSSSLSTSF*EKVEVFMKSKGWQLIWTLLYMASSQPIELFWQHGKQYF--SFNFDTKRTMKQVWEKVRKGWYRDDQW*ETIGGWKAAIRGKLVSHAVNEMNTWVR-NESILNGKMDALKVP 1767
L P+ G L QSR IL++YF+LV+ G +N + A+ +RIG K+ V TLW D++ L T+ +GRG +GR V+T Q L FI G+H+ G+QVFRRT + + +M N A+GGLL RLG++RRR RIKIPP N+ RK RIR FLV++ A ++ +AVIVY+DESF HQ HG AYS F +DD G+VQDG+GRT+ K +R+I+VHAI HGPL L ++G +R G ++ + K+ KP + Q L W KL + + + M HR T + ++ + H C K + K K T K R +R+ + +A V F + EK E +M+ KGW LIWT YM + QPIELFWQHGK Y S +F+ R + VW+K+R GWY D +W GWKAA GKLV HA+ +M+ W+ L+G + +L+ P
Sbjct: 91 LRPKTGELTTLQQSRIILMLYFDLVKGGSSENHAKEQVAKTLRIGTDKVLAVRTLWYDKQELYETNGKGRGKATSVDDGRRVITKEQEDGLREFIKGEHEAGRQVFRRTVKDYLECSFGLEMSNRAVGGLLQRLGFKRRRGRIKIPPLNEERKNRIRLFLVKMDLAKRAEDAGIAVIVYMDESFVHQAHGSAYSYFPSDDKGIVQDGIGRTTGKGLRMIMVHAITEHGPLAEL-------QEGFPIRE-GWFKAKENRAKKIKPGEADFEMSDEQTAEFL-------WQA---------KLATGDYHNAMTDGMFMQWLKHRLTPAFDAQFKNKKMFLVLDNASYHHCFDEEVKVPETNSKKYNVELLRKYGCTSFKVTRESEGKAAEYNFEVPAQGSLPNANRNGVSKEEIASVTRTY---------FKKNFPQKLEEKAETYMREKGWGLIWTPPYMPTFQPIELFWQHGKHYHYVSIHFEKGRNVLDVWKKIRLGWYGDPEWDGQERGWKAANCGKLVQHAIGKMDEWIGLYGGNLSGTIGSLEYP 606
BLAST of mRNA_H-paniculata_contig5144.12459.1 vs. uniprot
Match: A0A6H5KIM5_9PHAE (DDE_3 domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIM5_9PHAE) HSP 1 Score: 280 bits (715), Expect = 3.610e-82 Identity = 195/528 (36.93%), Postives = 274/528 (51.89%), Query Frame = 1
Query: 256 QSRAILLVYFNLVQSGMDQNPPVRETARVMRIGPKKIFKVHTLWEDQKSLKTTSAEGRGME-NGQNGRTVVTDLQTLKLCAFISGKHQDGQQVFRRTESE*VRAECDYDM-LNAAIGGLLYRLGYRRRRERIKIPPRNKARKTRIRQFLVELSGALTEKEEQMAVIVYIDESFCHQLHGFAYS*FFTDDDGVVQDGMGRTSEKSMRLIVVHAIPRHGPLKTLIRVYLSRRDGPKLRPRGTVSREKGQWKQ----RKPLRCSGRPNRLQWITTLA*PTKCSWSGSRIALSRL*KLLSQERR*C---LFSTMHRTTTNMTLRSGC---LKRTPRRTIQHCCASTRPK*SQFGVWKGR*RSTEKLSSTISKYARVDR-------SRTRAQSVAMVLAVRS*RWPLGCCFSSSLSTSF*EKVEVFMKSKGWQLIWTLLYMASSQPIELFWQHGKQYFSFNFDTKRTMKQVWEKVRKGWYRDDQW*ETIGGWKAAIRGKLVSHAVNEMNTWVRN-ESILNGKMDALKVPDDHD 1779
+SR +L++ F+L + G + V + AR +IG K+ +++ W D + L +A GRG +GR +T++Q +L FI+ +H+ G+QVFRRT +E + C+ + N + GGLL RLGY+RRR RIK PP N R RIR+FLVE+ A ++ +AVIVY+DESF HQ HG YS F +D+DGVVQDG+GRT+ K +R+I+VHAI + GPL L DG + E+G +K+ +K + L W LA + + + L LS M N + G +K T +H R FG R R E + V + R V+ + R + L E+V FM+ KGW LIWT YM S QPIELFWQHGKQY S NF+ KR M++VW ++RKGWY D +W GGWKAA KLV HA+ EMN WV++ + +L+G + +L+ PD +D
Sbjct: 103 ESRMVLMLLFDLRKGGCSEKEAVLKVARTFKIGHDKVRRINNHWWDHRQLYEITAVGRGKTAKKDDGRRRLTEVQEDQLREFINDEHKAGRQVFRRTVAEWMHRTCNMEQPSNRSAGGLLSRLGYKRRRGRIKTPPLNAERLARIRRFLVEMVMAKRAEDAGLAVIVYMDESFVHQAHGSPYSYFPSDEDGVVQDGIGRTTGKGLRMIMVHAITKWGPLAKLC-------DGLPI--------EEGWFKETGSGKKEMEDEETAEFL-WQAKLAKGDYHAAMTDSMFMEWLEHRLSPAYNAIPEFKGKRMILVLDNASYHHGFDAEVKVPETNTKKHNVDLLR----MFGAKSIRVRRKEGEQGVVEYNFEVPTEPGSSFPAGNREGGVSRAEVATATREYIHLNHPERLE----ERVVTFMRKKGWALIWTPPYMPSFQPIELFWQHGKQYVSLNFELKRKMREVWVQIRKGWYGDKEWPGQEGGWKAADCSKLVDHAIGEMNKWVKDRDGVLSGTIGSLEKPDGYD 606
BLAST of mRNA_H-paniculata_contig5144.12459.1 vs. uniprot
Match: A0A6H5KCN2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCN2_9PHAE) HSP 1 Score: 267 bits (683), Expect = 8.870e-79 Identity = 179/503 (35.59%), Postives = 255/503 (50.70%), Query Frame = 1
Query: 328 ETARVMRIGPKKIFKVHTLWEDQKSLKTTSAEGRGMENG-QNGRTVVTDLQTLKLCAFISGKHQDGQQVFRRTESE*VRAECDYDMLNAAIGGLLYRLGYRRRRERIKIPPRNKARKTRIRQFLVELSGALTEKEEQMAVIVYIDESFCHQLHGFAYS*FFTDDDGVVQDGMGRTSEKSMRLIVVHAIPRHGPLKTLIRVYLSRRDGPKLRPRGTVSREKGQ--------------WKQRKPLRCSGRPNRL------QWITTLA*PT-KCSWSGSRIALSRL*KLLSQERR*CLFSTMHRTTTNMTLRSGCLKRTPRRTIQHCCASTRPK*SQFGVWKGR*RSTEKLSSTISKYARVDRSRTRAQSVAMVLAVRS*RWPLGCCFSSSLSTSF*EKVEVFMKSKGWQLIWTLLYMASSQPIELFWQHGKQYFSFNFDTKRTMKQVWEKVRKGWYRDDQW*ETIGGWKAAIRGKLVSHAVNEMNTWVR-NESILNGKMDALKVP 1767
+ A +RIG + V TLW D++ L T+ +GRG +GR V+T Q L FI G+H+ G+QVFRRT + + +M N A+GGLL RLG++RRR RIKIPP N+ RK RIR FLV++ A ++ +AVIVYIDESF HQ HG AYS F +DD GVVQDG+GRT+ K +R+I+VHAI +HGPL L + R K + + G+ W+ + L N + QW+ P + ++ L L + C + TN + L R ++ C S + G ++ E ++ + + +R S + +V F + EK E +M+ KGW LIWT YM + QPIELFWQHGK Y S +F+ R + VW+++R GWY D +W GGWKAA GKLV HA+ +M+ W+ L+G + +L+ P
Sbjct: 6 QVATTLRIGTDNVLAVRTLWYDKQELYETNGKGRGKATSFDDGRRVITKEQEDGLREFIKGEHEAGRQVFRRTVKDYLECSFGLEMSNRAVGGLLQRLGFKRRRGRIKIPPLNEERKNRIRLFLVKMDLAKRAEDAGVAVIVYIDESFVHQAHGSAYSYFPSDDTGVVQDGIGRTTGKGLRMIMVHAITKHGPLAELQEGFPIREGWFKAKENRAKKIKPGEADFEMSDEQTAEFLWQAK--LATGDYHNAMTDGMFMQWLKHRLTPAFDAQFKNKKMFLV----LDNASYHHCFDEEVKVPETNSKKYNVELLR------KYGCTSFKVTRESEG------KAAEYNFEVPAQGSLPNANRKNGVSKEEIASVTR------TYFKKNFPQKLEEKAETYMREKGWGLIWTPPYMPTFQPIELFWQHGKHYVSIHFEKGRNILDVWKQIRLGWYGDPEWDGQEGGWKAANCGKLVQHAIGKMDEWIGLYGGNLSGTIGSLEYP 484
BLAST of mRNA_H-paniculata_contig5144.12459.1 vs. uniprot
Match: A0A6H5JR41_9PHAE (DDE_3 domain-containing protein n=5 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR41_9PHAE) HSP 1 Score: 263 bits (672), Expect = 8.120e-76 Identity = 188/504 (37.30%), Postives = 261/504 (51.79%), Query Frame = 1
Query: 328 ETARVMRIGPKKIFKVHTLWEDQKSLKTTSAEGRGME-NGQNGRTVVTDLQTLKLCAFISGKHQDGQQVFRRTESE*VRAECDYDM-LNAAIGGLLYRLGYRRRRERIKIPPRNKARKTRIRQFLVELSGALTEKEEQMAVIVYIDESFCHQLHGFAYS*FFTDDDGVVQDGMGRTSEKSMRLIVVHAIPRHGPLKTLIRVYLSRRDGPKLRPRGTVSREKGQWKQ----RKPLRCSGRPNRLQWITTLA*PTKCSWSGSRIALSRL*KLLSQERR*C---LFSTMHRTTTNMTLRSGCL---KRTPRRTIQHCCASTRPK*SQFGVWKGR*RSTEKLSSTISKYARVDR-------SRTRAQSVAMVLAVRS*RWPLGCCFSSSLSTSF*EKVEVFMKSKGWQLIWTLLYMASSQPIELFWQHGKQYFSFNFDTKRTMKQVWEKVRKGWYRDDQW*ETIGGWKAAIRGKLVSHAVNEMNTWVRN-ESILNGKMDALKVPDDHD 1779
+ AR +IG K+ +++ W D + L T+A GRG +GR +T++Q +L FI+ +H+ G+QVFRRT +E + C+ + N + GGLL RLGY+RRR RIK PP N R RIR+FLV ++ A ++ +AVIVY+DESF HQ HG YS F +D+DGVVQDG+GRT+ K +R+I+VHAI + GPL L DG + E+G +K+ +K + L W LA + + + L LS M N + G + K T +H R FG R R E + V + R V+ + R + L E+V FM+ KGW LIWT YM S QPIELFWQHGKQY S NF+ KR M++VW ++RKGWY D +W GGWKAA KLV HA+ EMN WV++ + +L+G + +L+ PD +D
Sbjct: 138 QVARTFKIGHDKVRRINNHWWDHRQLYETTAVGRGKTAKKDDGRRRLTEVQEDQLREFINDEHKAGRQVFRRTVAEWMHRTCNMEQPSNRSAGGLLSRLGYKRRRGRIKTPPLNAERLARIRRFLV-MNMAKRAEDAGLAVIVYMDESFVHQAHGSPYSYFPSDEDGVVQDGIGRTTGKGLRMIMVHAITKWGPLAKLC-------DGLPI--------EEGWFKETGSGKKEMEDEETAEFL-WQAKLAKGDYHAAMTDSMFMEWLEHRLSPAYNAIPEFKGKRMILVLDNASYHHGFVSEVKVPETNTKKHNVDLLR----MFGAKSIRVRRKEGEQGVVEYNFEVPTEPGSSFPAGNREGGVSRAEVATATREYIHLNHPERLE----ERVVTFMRKKGWALIWTPPYMPSFQPIELFWQHGKQYVSLNFELKRKMREVWVQIRKGWYGDKEWPGQEGGWKAADCSKLVDHAIGEMNKWVKDRDGVLSGTIGSLEKPDGYD 616
BLAST of mRNA_H-paniculata_contig5144.12459.1 vs. uniprot
Match: A0A6H5KP14_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP14_9PHAE) HSP 1 Score: 257 bits (657), Expect = 4.310e-75 Identity = 172/475 (36.21%), Postives = 241/475 (50.74%), Query Frame = 1
Query: 352 GPKKIFKVHTLWEDQKSLKTTSAEGRGMENG-QNGRTVVTDLQTLKLCAFISGKHQDGQQVFRRTESE*VRAECDYDMLNAAIGGLLYRLGYRRRRERIKIPPRNKARKTRIRQFLVELSGALTEKEEQMAVIVYIDESFCHQLHGFAYS*FFTDDDGVVQDGMGRTSEKSMRLIVVHAIPRHGPLKTLIRVYLSRRDGPKLRPRGTVSREKGQ--------------WKQRKPLRCSGRPNRL------QWITTLA*PT-KCSWSGSRIALSRL*KLLSQERR*CLFSTMHRTTTNMTLRSGCLKRTPRRTIQHCCASTRPK*SQFGVWKGR*RSTEKLSSTISKYARVDRSRTRAQSVAMVLAVRS*RWPLGCCFSSSLSTSF*EKVEVFMKSKGWQLIWTLLYMASSQPIELFWQHGKQYFSFNFDTKRTMKQVWEKVRKGWYRDDQW*ETIGGWKAAIRGKLVSHAVNEMN 1710
G K+ V TLW D++ L T+ +GRG +GR V+T Q L FI G+H+ G+QVFRRT + + +M N A+GGLL RLG++RRR RIKIPP N+ RK RIR FLV++ A ++ +AVIVY+DESF HQ HG AYS F +DD GVVQDG+GRT+ K +R+I+VHAI +HGPL L + R K + + G+ W+ + L N + QW+ P + ++ L L + C + TN + L R ++ C S + G ++ E ++ + + +R S + +V F + EK E +M+ KGW LIWT YM + QPIELFWQHGK Y S +F+ R M VW+++R GWY D +W GGWKAA GKLV HA+ +M+
Sbjct: 58 GTDKVLAVRTLWYDKQELYETNGKGRGKATSVDDGRRVITQEQEDGLREFIKGEHEAGRQVFRRTVKDYLECSFGLEMSNRAVGGLLQRLGFKRRRGRIKIPPLNEERKNRIRLFLVKMDLAKGAEDAGVAVIVYMDESFVHQAHGSAYSYFPSDDTGVVQDGIGRTTGKGLRMIMVHAITKHGPLAELQEGFPIREGWFKAKENRAKKIKPGEADFEMSDEQTAEFLWQAK--LATGDYHNAMTDGMFMQWLKHRLTPAFDAQFKNKKMFLV----LDNASYHHCFDEEVKVPETNSKKYNVELLR------KYGCTSFKVTRESEG------KAAEYNFEVPAQGSLPNANRKNGVSKEEIASVTR------TYFKKNFPQKLEEKAETYMREKGWGLIWTPPYMPTFQPIELFWQHGKHYVSIHFEKGRNMLDVWKQIRLGWYGDPEWDGQEGGWKAANCGKLVQHAIGKMD 508
BLAST of mRNA_H-paniculata_contig5144.12459.1 vs. uniprot
Match: A0A6H5KDX7_9PHAE (DDE_3 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDX7_9PHAE) HSP 1 Score: 256 bits (654), Expect = 5.860e-75 Identity = 182/485 (37.53%), Postives = 246/485 (50.72%), Query Frame = 1
Query: 328 ETARVMRIGPKKIFKVHTLWEDQKSLKTTSAEGRGME-NGQNGRTVVTDLQTLKLCAFISGKHQDGQQVFRRTESE*VRAECDYDM-LNAAIGGLLYRLGYRRRRERIKIPPRNKARKTRIRQFLVELSGALTEKEEQMAVIVYIDESFCHQLHGFAYS*FFTDDDGVVQDGMGRTSEKSMRLIVVHAIPRHGPLKTLIRVYLSRRDGPKLRPRGTVSREKGQWKQ----RKPLRCSGRPNRLQWITTLA*PTKCSWSGSRIALSRL*KLLSQERR*C---LFSTMHRTTTNMTLRSGC---LKRTPRRTIQHCCASTRPK*SQFGVWKGR*RSTEKLSSTISKYARVDR-------SRTRAQSVAMVLAVRS*RWPLGCCFSSSLSTSF*EKVEVFMKSKGWQLIWTLLYMASSQPIELFWQHGKQYFSFNFDTKRTMKQVWEKVRKGWYRDDQW*ETIGGWKAAIRGKLVSHAVNEMNTWVRN 1725
+ AR +IG K+ +++ W D + L T+A GRG +GR +T++Q +L FI+ +H+ G+QVFRRT +E + C+ + N + GGLL RLGY+RRR RIK PP N R RIR+FLVE+ A ++ +AVIVY+DESF HQ HG YS F +D+DGVVQDG+GRT+ K +R+I+VHAI + GPL L DG + E+G +K+ +K + L W LA + + + L LS M N + G +K T +H R FG R R E + V + R V+ + R + L E+V FM+ KGW LIWT YM S QPIELFWQHGKQY S F+ KR M++VW ++RKGWY D W GGWKAA KLV HA+ EMN WV++
Sbjct: 10 QVARTFKIGHDKVRRINNHWWDHRQLYETTAVGRGKTAKKDDGRRRLTEVQEDQLREFINDEHKAGRQVFRRTVAEWMHRTCNMEQPSNRSAGGLLSRLGYKRRRGRIKTPPLNAERLARIRRFLVEMDMAKRAEDAGLAVIVYMDESFVHQAHGSPYSYFPSDEDGVVQDGIGRTTGKGLRMIMVHAITKWGPLAKLC-------DGLPI--------EEGWFKETGSGKKEMEDEETAEFL-WQAKLAKGDYHAAMTDSMFMEWLEHRLSPAYNAIPEFKGKRMILVLDNASYHHGFDAEVKVPESNTKKHNVDLLR----MFGAKSIRVRRKEGEQGVVEYNLEVPTEPGSSFPAGNREGGVSRAEVATATREYIHLNHPERLE----ERVVTFMRKKGWALIWTPPYMPSFQPIELFWQHGKQYVSLKFELKRKMREVWVQIRKGWYGDKAWPGQEGGWKAANCSKLVDHAIGEMNKWVKD 470
BLAST of mRNA_H-paniculata_contig5144.12459.1 vs. uniprot
Match: A0A6H5KKL0_9PHAE (DDE_3 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKL0_9PHAE) HSP 1 Score: 222 bits (566), Expect = 2.830e-62 Identity = 162/466 (34.76%), Postives = 238/466 (51.07%), Query Frame = 1
Query: 268 ILLVYFNLVQSGMDQNPPVRETARVMRIGPKKIFKVHTLWEDQKSLKTTSAEGRGME-NGQNGRTVVTDLQTLKLCAFISGKHQDGQQVFRRTESE*VRAECDYDM-LNAAIGGLLYRLGYRRRRERIKIPPRNKARKTRIRQFLVELSGALTEKEEQMAVIVYIDESFCHQLHGFAYS*FFTDDDGVVQDGMGRTSEKSMRLIVVHAIPRHGPLKTLIRVYLSRRDGPKLRPRGTVSREKGQWKQRKPLRCSGRPNRLQWITTLA*PTKCSWSGSRIALSRL*KLLSQERR*CLFSTMHRTTTNMTLRSGCLKRTPRRTIQHCCASTRPK*SQFGVWKGR*RSTEKLSSTISKYARVDR-------SRTRAQSVAMVLAVRS*RWPLGCCFSSSLSTSF*EKVEVFMKSKGWQLIWTLLYMASSQPIELFWQHGKQYFSFNFDTKRTMKQVWEKVRKGWYRDDQW 1638
+L++ F+L + G +N V + AR +IG K+ +++ W D + L T+A GRG +GR +T++Q +L FI+ +H+ G+QVFRRT +E + C+ + N + GLL RLGY+ RR RIK PP N R RIR+FLVE+ A ++ +AVIVYID SF HQ HG YS F D+D VVQDG+GRT+ K +R+I+VHAI + GPL L V L +G + G+ RE + + L + + + + W R LS + + + + + + + + +K T +H R FG R + E + + V + R V+ + R + L E+V FM+ KG LIWT YM S QPIELFWQHGKQY S NF+ KR +++VW ++RKGWY D +W
Sbjct: 2 VLMLLFDLRKEGRAENEAVLQVARTFKIGHDKVRRINNHWWDHRQLYETTAVGRGKTAKKDDGRRRLTEVQEDQLREFINDEHKAGRQVFRRTVAEWMHRTCNMEQPSNRSAEGLLSRLGYKGRRGRIKTPPLNAERLARIRRFLVEMDMAKRAEDAGLAVIVYIDGSFVHQAHGSPYSYFPADEDEVVQDGIGRTTGKGLRVIMVHAITKWGPLAKLC-VGLPIEEG-WFKETGSGKREMEDEETAEFL-WQAKLAKGDYHAAMTDSMFMEWLEHR--LSPAYNAIPEFKGKRMILVLDNASYHHGFDAE-VKVPETNTKKHNVDLLR----MFGAKSIRVKRKEGEQGVVEENFEVPTEPGSSFPAGNREGGVSRAEVATATREYIHLNHPERLE----ERVVTFMRKKGLALIWTPPYMPSFQPIELFWQHGKQYVSVNFELKRKVREVWVQIRKGWYGDKEW 453 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5144.12459.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig5144.12459.1 >prot_H-paniculata_contig5144.12459.1 ID=prot_H-paniculata_contig5144.12459.1|Name=mRNA_H-paniculata_contig5144.12459.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=173bp MVKVKEAAIKAREAACATDEAANKAAHEAARPKLKQRLPDARQILPALEQback to top mRNA from alignment at H-paniculata_contig5144:3078..5353+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig5144.12459.1 ID=mRNA_H-paniculata_contig5144.12459.1|Name=mRNA_H-paniculata_contig5144.12459.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2276bp|location=Sequence derived from alignment at H-paniculata_contig5144:3078..5353+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig5144:3078..5353+ >mRNA_H-paniculata_contig5144.12459.1 ID=mRNA_H-paniculata_contig5144.12459.1|Name=mRNA_H-paniculata_contig5144.12459.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1038bp|location=Sequence derived from alignment at H-paniculata_contig5144:3078..5353+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |