prot_H-paniculata_contig51404.12454.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig51404.12454.1
Unique Nameprot_H-paniculata_contig51404.12454.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length73
Homology
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BLAST of mRNA_H-paniculata_contig51404.12454.1 vs. uniprot
Match: A0A6H5JF92_9PHAE (6-phosphogluconolactonase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JF92_9PHAE)

HSP 1 Score: 104 bits (259), Expect = 1.130e-25
Identity = 51/72 (70.83%), Postives = 59/72 (81.94%), Query Frame = 0 
Query:    1 QVIFIGTGGGKASLLPQLLVVTGARKLKSAGDASPYPAARVRVGEGRELLWCVDQAAASQCPPEIMELATTC 72
             V+FIGTG GKASLLPQLL V     L+SAG++SPYPAARV+V EG+ L WCVD+AAASQCPPEI+ LAT C
Sbjct:  204 NVMFIGTGEGKASLLPQLLSVGTDGALESAGESSPYPAARVKVAEGKALAWCVDEAAASQCPPEIVALATKC 275
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BLAST of mRNA_H-paniculata_contig51404.12454.1 vs. uniprot
Match: A0A852IYC7_9PICI (6-phosphogluconolactonase (Fragment) n=1 Tax=Tricholaema leucomelas TaxID=240729 RepID=A0A852IYC7_9PICI)

HSP 1 Score: 51.2 bits (121), Expect = 2.190e-6
Identity = 30/67 (44.78%), Postives = 40/67 (59.70%), Query Frame = 0 
Query:    1 QVIFIGTGGGKASLLPQLLVVTGARKLKSAGDASPYPAARVRVGEGRELLWCVDQAAASQ---CPPE 64
            +V+F+GTG GKA+ + ++L          A D +P PAARVR   G +LLW +DQ AA Q   CP E
Sbjct:   67 EVVFVGTGAGKAAAVKRIL---------EAEDPNPLPAARVRPRSG-QLLWLLDQEAAQQLSSCPQE 123
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig51404.12454.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JF92_9PHAE1.130e-2570.836-phosphogluconolactonase n=2 Tax=Ectocarpus TaxID... [more]
A0A852IYC7_9PICI2.190e-644.786-phosphogluconolactonase (Fragment) n=1 Tax=Trich... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.1360coord: 1..61
e-value: 4.5E-6
score: 28.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig51404contigH-paniculata_contig51404:939..1157 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig51404.12454.1mRNA_H-paniculata_contig51404.12454.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig51404 939..1157 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig51404.12454.1 ID=prot_H-paniculata_contig51404.12454.1|Name=mRNA_H-paniculata_contig51404.12454.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=73bp
QVIFIGTGGGKASLLPQLLVVTGARKLKSAGDASPYPAARVRVGEGRELL
WCVDQAAASQCPPEIMELATTC*
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