prot_H-paniculata_contig5137.12446.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5137.12446.1
Unique Nameprot_H-paniculata_contig5137.12446.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length200
Homology
BLAST of mRNA_H-paniculata_contig5137.12446.1 vs. uniprot
Match: A0A6H5KD48_9PHAE (t-SNARE coiled-coil homology domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KD48_9PHAE)

HSP 1 Score: 310 bits (793), Expect = 1.230e-103
Identity = 163/177 (92.09%), Postives = 171/177 (96.61%), Query Frame = 0
Query:    1 MREETEAMKRDPSRAKPSEVRVRENLQNTLTRKFVDLAKDYQNRQNKYKTSIKKKAERQIRAVKPSATEEELTAVFEQEDGVKRVMEAAILQQGDPVEVTHVLEEVKDTYRDVRRLEASIIELHKMFMDLALLVDRQGEMLDQIEFQVKSAADYVRDANTDIEHAISSQKKVRKRQC 177
            MREETEAMK+DPSRAKPSEVRVRENLQNTLTRKFVDLAKDYQNRQNKYKTS+KKKAERQI AVKPSATEEELT VFEQEDGV+RVMEAAILQQGDPVEVTHVLEEVKDTY DVRRLEASI+ELHKMFMDLALLVDRQGEMLDQIE+QVKSA+DYV+DANTDI HAI S KK+RKRQC
Sbjct:  113 MREETEAMKKDPSRAKPSEVRVRENLQNTLTRKFVDLAKDYQNRQNKYKTSVKKKAERQILAVKPSATEEELTTVFEQEDGVQRVMEAAILQQGDPVEVTHVLEEVKDTYHDVRRLEASILELHKMFMDLALLVDRQGEMLDQIEYQVKSASDYVKDANTDIAHAIDSSKKIRKRQC 289          
BLAST of mRNA_H-paniculata_contig5137.12446.1 vs. uniprot
Match: A0A836CD59_9STRA (Soluble NSF attachment protein receptor n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CD59_9STRA)

HSP 1 Score: 228 bits (580), Expect = 2.060e-71
Identity = 117/178 (65.73%), Postives = 148/178 (83.15%), Query Frame = 0
Query:    1 MREETEAMKRDPSRAKPSEVRVRENLQNTLTRKFVDLAKDYQNRQNKYKTSIKKKAERQIRAVKPSATEEELTAVFEQEDGVKRVMEAAILQQ-GDPVEVTHVLEEVKDTYRDVRRLEASIIELHKMFMDLALLVDRQGEMLDQIEFQVKSAADYVRDANTDIEHAISSQKKVRKRQC 177
            +R ET A+KRDP R+  + +RVR NL+ T TRKFVD+AK+YQN+QN+YK+ +K KAER ++AVKP+ TE+E+ AVF+Q+DGVKRV+EAA++QQ GDPVEV +VL EV+D Y DVRRLEASI+ELH+MFMDLALLV++QGE LD IEFQVK A DYVR  N  +E AI+  K+VRKRQC
Sbjct:  105 LRTETAALKRDPKRSTNANIRVRANLETTFTRKFVDVAKEYQNKQNRYKSQVKGKAERAVKAVKPTVTEDEMAAVFQQDDGVKRVLEAAVMQQSGDPVEVANVLAEVQDQYEDVRRLEASILELHRMFMDLALLVEQQGETLDVIEFQVKQAGDYVRQGNVSLEDAIAKAKQVRKRQC 282          
BLAST of mRNA_H-paniculata_contig5137.12446.1 vs. uniprot
Match: A0A836CCH9_9STRA (Soluble NSF attachment protein receptor n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCH9_9STRA)

HSP 1 Score: 177 bits (449), Expect = 9.850e-52
Identity = 97/177 (54.80%), Postives = 130/177 (73.45%), Query Frame = 0
Query:    1 MREETEAMKRDPSRAKPSEVRVRENLQNTLTRKFVDLAKDYQNRQNKYKTSIKKKAERQIRAVKPSATEEELTAVFEQEDGVKRVMEAAILQQGDPVEVTHVLEEVKDTYRDVRRLEASIIELHKMFMDLALLVDRQGEMLDQIEFQVKSAADYVRDANTDIEHAISSQKKVRKRQC 177
            +R ET  +KRD      + +RVR NL+ +   KFVD AK+Y+N+Q++Y+  +K+KAER IRAVKP  TEEE+TAVF  EDGV RV++AA+LQ    ++   VL EV+DTY+DVRRLEASI+ELH+MFMDLALLV++QGE LD IE QV  A +Y+R  + ++  A+ + K VR RQC
Sbjct:   99 IRAETTELKRDRKGITDANLRVRVNLERSTLTKFVDAAKEYENKQSRYRLQVKRKAERVIRAVKPLVTEEEMTAVFNHEDGVARVLQAAVLQSRTGID--DVLTEVQDTYKDVRRLEASIMELHRMFMDLALLVEQQGETLDNIELQVIEAGEYIRHGDKNLAVAVDTAKTVRGRQC 273          
BLAST of mRNA_H-paniculata_contig5137.12446.1 vs. uniprot
Match: A0A7S2LQF4_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LQF4_9STRA)

HSP 1 Score: 168 bits (426), Expect = 2.590e-49
Identity = 88/177 (49.72%), Postives = 123/177 (69.49%), Query Frame = 0
Query:    1 MREETEAMKRDPSRAKPSEVRVRENLQNTLTRKFVDLAKDYQNRQNKYKTSIKKKAERQIRAVKPSATEEELTAVFEQEDGVKRVMEAAILQQGDPVEVTHVLEEVKDTYRDVRRLEASIIELHKMFMDLALLVDRQGEMLDQIEFQVKSAADYVRDANTDIEHAISSQKKVRKRQC 177
            ++EE   +K+    AKP+++RVRENL NTL RKF+D  K YQN Q +YKT +KKK  RQ++ V+P+AT++E+  +   E G + + +  IL  G   ++      V   Y+DV  LEAS+ ELH+MF+D ALL ++QGE+LDQIE+QVK+AADYV DAN D+  AI  QKK+RK+QC
Sbjct:   18 LKEENANLKKTEGAAKPTDLRVRENLVNTLLRKFIDEMKRYQNSQQQYKTDVKKKVTRQVQMVRPNATDQEVDEIMRSEGGREALYQQQILSGGVNDQIKTQYRAVAGKYQDVLTLEASVAELHQMFLDFALLTEQQGELLDQIEYQVKTAADYVEDANVDVHEAIEYQKKIRKKQC 194          
BLAST of mRNA_H-paniculata_contig5137.12446.1 vs. uniprot
Match: A0A4D9D821_9STRA (t-SNARE coiled-coil homology domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D821_9STRA)

HSP 1 Score: 171 bits (432), Expect = 5.800e-49
Identity = 95/177 (53.67%), Postives = 129/177 (72.88%), Query Frame = 0
Query:    1 MREETEAMKRDPSRAKPSEVRVRENLQNTLTRKFVDLAKDYQNRQNKYKTSIKKKAERQIRAVKPSATEEELTAVFEQEDGVKRVMEAAILQQGDPVEVTHVLEEVKDTYRDVRRLEASIIELHKMFMDLALLVDRQGEMLDQIEFQVKSAADYVRDANTDIEHAISSQKKVRKRQC 177
            M++ET  +++D SR  PS++R+R+NL NTLTRKFVD+ KDYQN Q KYK  IK K +RQ++ VKP A+ EE+ AVF+   G  +V+  AIL+ G    + +V + V D Y+DV  LEASI ELH+MF+D ALLV++QGEMLDQIE+QVK AA+YV +    ++ AI++ KK RK QC
Sbjct:  119 MKDETTKLRQD-SRCTPSQLRIRDNLTNTLTRKFVDVMKDYQNAQTKYKAFIKDKVQRQVQIVKPDASTEEIEAVFKSGGGGDQVITQAILK-GANESIRNVYQNVADKYQDVLTLEASIAELHQMFLDFALLVEQQGEMLDQIEYQVKGAANYVEEGTLQVQGAIANAKKARKYQC 293          
BLAST of mRNA_H-paniculata_contig5137.12446.1 vs. uniprot
Match: A0A1Z5KDM7_FISSO (Syntaxin 1B/2/3 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KDM7_FISSO)

HSP 1 Score: 162 bits (411), Expect = 4.950e-46
Identity = 91/177 (51.41%), Postives = 121/177 (68.36%), Query Frame = 0
Query:    1 MREETEAMKRDPSRAKPSEVRVRENLQNTLTRKFVDLAKDYQNRQNKYKTSIKKKAERQIRAVKPSATEEELTAVFEQEDGVKRVMEAAILQQGDPVEVTHVLEEVKDTYRDVRRLEASIIELHKMFMDLALLVDRQGEMLDQIEFQVKSAADYVRDANTDIEHAISSQKKVRKRQC 177
            ++EET+ ++ +  + K S++RVRENL NTLTRKF+D  K YQ  Q KYKT IKKK  RQ++ VKP AT+E++ AV   E G   +    IL  G   +V    E+V   Y+DV  LE S+ ELH+MF+D ALL ++QGE+LDQIEFQVK A DYV +AN D+  AI  Q+K+RK+QC
Sbjct:  106 LKEETQKLQEN-KQIKQSDLRVRENLCNTLTRKFIDEMKAYQAAQQKYKTDIKKKVARQVQIVKPDATDEDIDAVMRSEGGRDALYREQILAGGVNDQVKTTYEKVAGKYQDVLALEHSVAELHQMFLDFALLTEQQGELLDQIEFQVKQAGDYVEEANVDVYEAIEYQRKIRKKQC 281          
BLAST of mRNA_H-paniculata_contig5137.12446.1 vs. uniprot
Match: B7FXT5_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FXT5_PHATC)

HSP 1 Score: 160 bits (405), Expect = 4.020e-45
Identity = 92/177 (51.98%), Postives = 118/177 (66.67%), Query Frame = 0
Query:    1 MREETEAMKRDPSRAKPSEVRVRENLQNTLTRKFVDLAKDYQNRQNKYKTSIKKKAERQIRAVKPSATEEELTAVFEQEDGVKRVMEAAILQQGDPVEVTHVLEEVKDTYRDVRRLEASIIELHKMFMDLALLVDRQGEMLDQIEFQVKSAADYVRDANTDIEHAISSQKKVRKRQC 177
            ++EE + +K D    KPS++R  ENL NTLTRKF+D  K YQ  Q KYKT IKKK  RQ++ VKP ATEEE+ AV   E G   +    IL  G   ++    ++V   Y+DV  LE S+ ELH+MF+D ALL ++QGE+LDQIEFQVK AADYV DAN D+  +I  QK +RK+QC
Sbjct:  106 LKEENQKLKGDGD-VKPSDLRY-ENLCNTLTRKFIDEMKAYQASQQKYKTDIKKKVTRQVQIVKPDATEEEVDAVMRSEGGRDALYRERILAGGVNDQINTTYKKVAGKYQDVLALEQSVAELHQMFLDFALLTEQQGELLDQIEFQVKQAADYVEDANVDVYESIEHQKSIRKKQC 280          
BLAST of mRNA_H-paniculata_contig5137.12446.1 vs. uniprot
Match: B8BWQ6_THAPS (Syntaxin, epimorphin family n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BWQ6_THAPS)

HSP 1 Score: 159 bits (402), Expect = 4.350e-45
Identity = 82/160 (51.25%), Postives = 113/160 (70.62%), Query Frame = 0
Query:   18 SEVRVRENLQNTLTRKFVDLAKDYQNRQNKYKTSIKKKAERQIRAVKPSATEEELTAVFEQEDGVKRVMEAAILQQGDPVEVTHVLEEVKDTYRDVRRLEASIIELHKMFMDLALLVDRQGEMLDQIEFQVKSAADYVRDANTDIEHAISSQKKVRKRQC 177
            +++RVRENL NTL RKF+D  K YQN Q +YKT +KKK  RQ++ +KP AT++E+  +   E G + + +  IL  G   ++     +V   Y+DV  LEAS+ ELH+MF+D ALL ++QGE+LDQIE+QV+SAADYV DAN D+  AI  QKK+RK+QC
Sbjct:   85 TDLRVRENLVNTLLRKFIDEMKRYQNSQQQYKTDVKKKVTRQVQMIKPDATDQEVDDIMRSEGGREALYQQQILSGGVNDQIKTQYRQVAGKYQDVLTLEASVAELHQMFLDFALLTEQQGELLDQIEYQVRSAADYVEDANVDVYEAIEYQKKIRKKQC 244          
BLAST of mRNA_H-paniculata_contig5137.12446.1 vs. uniprot
Match: A0A7S2RH32_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RH32_9STRA)

HSP 1 Score: 158 bits (399), Expect = 5.180e-45
Identity = 85/176 (48.30%), Postives = 118/176 (67.05%), Query Frame = 0
Query:    1 MREETEAMKRDPSRAKPSEVRVRENLQNTLTRKFVDLAKDYQNRQNKYKTSIKKKAERQIRAVKPSATEEELTAVFEQEDGVKRVMEAAILQQGDPVEVTHVLEEVKDTYRDVRRLEASIIELHKMFMDLALLVDRQGEMLDQIEFQVKSAADYVRDANTDIEHAISSQKKVRKRQ 176
            ++EE E +K+     KPS++R+R+NL NTLTRKFVD  K YQN Q KYKT ++KKA RQI+ +KP ATEEE+  + + + G + + +  IL  G    +      V   Y+DV  LE S+ ELH++F D ALL D+QGE+LDQIEF VK AAD++ DAN ++  +I  QK +RK+Q
Sbjct:   39 LKEENEKLKK--KNVKPSDLRIRQNLCNTLTRKFVDEIKQYQNAQQKYKTDLRKKAARQIKVIKPDATEEEVDVIMKTDGGREALYKETILSGGVNDNIKTAYANVAGKYQDVLALEQSVAELHQLFQDFALLTDQQGELLDQIEFNVKEAADHIEDANVEVFESIELQKSIRKKQ 212          
BLAST of mRNA_H-paniculata_contig5137.12446.1 vs. uniprot
Match: A0A7S2FD15_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FD15_9STRA)

HSP 1 Score: 159 bits (403), Expect = 6.680e-45
Identity = 85/177 (48.02%), Postives = 122/177 (68.93%), Query Frame = 0
Query:    1 MREETEAMKRDPSRAKPSEVRVRENLQNTLTRKFVDLAKDYQNRQNKYKTSIKKKAERQIRAVKPSATEEELTAVFEQEDGVKRVMEAAILQQGDPVEVTHVLEEVKDTYRDVRRLEASIIELHKMFMDLALLVDRQGEMLDQIEFQVKSAADYVRDANTDIEHAISSQKKVRKRQC 177
            M+EET+ + R+  +AK +E R+RENL NTLTRKF+++ K+YQ RQ  YK  +KKK  RQ++ VK  AT EE+  V +   G   + ++AIL+  +  EV     +  D Y+DV RLE S+ ELH+MF+D ALL ++QGE+LDQIE+QV +A++Y+ D N D+E A   QK +RK+QC
Sbjct:   98 MKEETDTLARENDKAKANEQRIRENLVNTLTRKFMEVVKEYQKRQQDYKDDVKKKVTRQVKIVKEDATPEEIDQVMKSAGGTGAMFKSAILKSANN-EVVEAYSQAADQYQDVLRLEESMQELHQMFVDFALLTEQQGELLDQIEYQVHAASEYITDGNDDLEVAGDYQKSIRKKQC 273          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5137.12446.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KD48_9PHAE1.230e-10392.09t-SNARE coiled-coil homology domain-containing pro... [more]
A0A836CD59_9STRA2.060e-7165.73Soluble NSF attachment protein receptor n=1 Tax=Tr... [more]
A0A836CCH9_9STRA9.850e-5254.80Soluble NSF attachment protein receptor n=1 Tax=Tr... [more]
A0A7S2LQF4_9STRA2.590e-4949.72Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
A0A4D9D821_9STRA5.800e-4953.67t-SNARE coiled-coil homology domain-containing pro... [more]
A0A1Z5KDM7_FISSO4.950e-4651.41Syntaxin 1B/2/3 n=2 Tax=Fistulifera solaris TaxID=... [more]
B7FXT5_PHATC4.020e-4551.98Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]
B8BWQ6_THAPS4.350e-4551.25Syntaxin, epimorphin family n=1 Tax=Thalassiosira ... [more]
A0A7S2RH32_9STRA5.180e-4548.30Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A7S2FD15_9STRA6.680e-4548.02Hypothetical protein n=1 Tax=Florenciella parvula ... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000727Target SNARE coiled-coil homology domainSMARTSM00397tSNARE_6coord: 98..165
e-value: 2.5E-13
score: 60.3
IPR000727Target SNARE coiled-coil homology domainPFAMPF05739SNAREcoord: 139..190
e-value: 4.7E-10
score: 39.3
IPR000727Target SNARE coiled-coil homology domainPROSITEPS50192T_SNAREcoord: 103..165
score: 16.702
NoneNo IPR availableGENE3D1.20.58.70coord: 1..155
e-value: 2.1E-41
score: 144.1
NoneNo IPR availablePANTHERPTHR19957SYNTAXINcoord: 11..191
NoneNo IPR availablePANTHERPTHR19957:SF41SYNTAXIN-1Bcoord: 11..191
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 177..197
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 198..199
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..176
NoneNo IPR availableTMHMMTMhelixcoord: 180..197
IPR006011Syntaxin, N-terminal domainPFAMPF00804Syntaxincoord: 4..138
e-value: 3.5E-20
score: 72.6
IPR010989SNARESUPERFAMILY47661t-snare proteinscoord: 9..158

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5137contigH-paniculata_contig5137:4975..9165 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5137.12446.1mRNA_H-paniculata_contig5137.12446.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5137 2005..10012 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5137.12446.1 ID=prot_H-paniculata_contig5137.12446.1|Name=mRNA_H-paniculata_contig5137.12446.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=200bp
MREETEAMKRDPSRAKPSEVRVRENLQNTLTRKFVDLAKDYQNRQNKYKT
SIKKKAERQIRAVKPSATEEELTAVFEQEDGVKRVMEAAILQQGDPVEVT
HVLEEVKDTYRDVRRLEASIIELHKMFMDLALLVDRQGEMLDQIEFQVKS
AADYVRDANTDIEHAISSQKKVRKRQCCTIVLVLVIITILAVIIYYLSQ*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000727T_SNARE_dom
IPR006011Syntaxin_N
IPR010989SNARE