prot_H-paniculata_contig51307.12441.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig51307.12441.1
Unique Nameprot_H-paniculata_contig51307.12441.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length61
Homology
BLAST of mRNA_H-paniculata_contig51307.12441.1 vs. uniprot
Match: UPI00092FCD17 (uncharacterized protein LOC109338179 n=1 Tax=Lupinus angustifolius TaxID=3871 RepID=UPI00092FCD17)

HSP 1 Score: 61.6 bits (148), Expect = 2.270e-10
Identity = 28/59 (47.46%), Postives = 38/59 (64.41%), Query Frame = 0
Query:    3 IYNRKIGEDGKVEKYKCSLVAHGNCQIKGIHYQEALSPAPAVARTRMVLSLAAIQDWEV 61
            +YN+ IGEDGKVE YK  LVA G CQ  GI Y E  SP   +   R++L++ A  D+++
Sbjct:   99 VYNKNIGEDGKVETYKARLVAKGYCQKGGIDYDETYSPVAMMKLIRILLAVEAYHDYKI 157          
BLAST of mRNA_H-paniculata_contig51307.12441.1 vs. uniprot
Match: A0A1S4A739_TOBAC (uncharacterized mitochondrial protein AtMg00820-like n=1 Tax=Nicotiana tabacum TaxID=4097 RepID=A0A1S4A739_TOBAC)

HSP 1 Score: 57.4 bits (137), Expect = 2.240e-8
Identity = 27/57 (47.37%), Postives = 36/57 (63.16%), Query Frame = 0
Query:    3 IYNRKIGEDGKVEKYKCSLVAHGNCQIKGIHYQEALSPAPAVARTRMVLSLAAIQDW 59
            IY  K   +G VE+YK  LVA G  Q +G+ YQE  SP   +   R+V+S+AA+QDW
Sbjct:  137 IYKIKYKANGTVERYKARLVAKGYNQKEGLDYQETFSPVGKMVTVRVVISIAAVQDW 193          
BLAST of mRNA_H-paniculata_contig51307.12441.1 vs. uniprot
Match: A0A151S309_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Cajanus cajan TaxID=3821 RepID=A0A151S309_CAJCA)

HSP 1 Score: 57.4 bits (137), Expect = 4.300e-8
Identity = 25/59 (42.37%), Postives = 37/59 (62.71%), Query Frame = 0
Query:    3 IYNRKIGEDGKVEKYKCSLVAHGNCQIKGIHYQEALSPAPAVARTRMVLSLAAIQDWEV 61
            +Y  K   DG +E+YK  LVA G  QI+G+ Y +  SP   +   R+VL+LAA+Q+W +
Sbjct:  309 VYKIKTRSDGTIERYKARLVAKGYTQIEGLDYLDTFSPVAKLTTIRVVLALAAMQNWHI 367          
BLAST of mRNA_H-paniculata_contig51307.12441.1 vs. uniprot
Match: A0A2Z6NK18_TRISU (Uncharacterized protein n=3 Tax=Trifolium subterraneum TaxID=3900 RepID=A0A2Z6NK18_TRISU)

HSP 1 Score: 57.0 bits (136), Expect = 5.920e-8
Identity = 30/59 (50.85%), Postives = 34/59 (57.63%), Query Frame = 0
Query:    3 IYNRKIGEDGKVEKYKCSLVAHGNCQIKGIHYQEALSPAPAVARTRMVLSLAAIQDWEV 61
            IY  K  E G++EKYK  LVA G  Q  GI Y E  +P       RMVLSLAA Q+W V
Sbjct:  824 IYKTKYNEKGEIEKYKARLVAKGYSQQYGIDYNEVFAPVARWDTIRMVLSLAACQNWFV 882          
BLAST of mRNA_H-paniculata_contig51307.12441.1 vs. uniprot
Match: A0A6L2LLF6_TANCI (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Tanacetum cinerariifolium TaxID=118510 RepID=A0A6L2LLF6_TANCI)

HSP 1 Score: 56.6 bits (135), Expect = 8.000e-8
Identity = 28/57 (49.12%), Postives = 34/57 (59.65%), Query Frame = 0
Query:    3 IYNRKIGEDGKVEKYKCSLVAHGNCQIKGIHYQEALSPAPAVARTRMVLSLAAIQDW 59
            +Y  K  E+G+VEKYK  LVA G  Q  GI Y E  SP   +   R+V+SLAA  DW
Sbjct:  441 VYKTKYNENGEVEKYKTRLVAKGYAQKCGIDYTEVFSPIARLETIRLVISLAAQNDW 497          
BLAST of mRNA_H-paniculata_contig51307.12441.1 vs. uniprot
Match: A0A2P6S8W7_ROSCH (Putative RNA-directed DNA polymerase n=1 Tax=Rosa chinensis TaxID=74649 RepID=A0A2P6S8W7_ROSCH)

HSP 1 Score: 56.6 bits (135), Expect = 8.090e-8
Identity = 24/59 (40.68%), Postives = 37/59 (62.71%), Query Frame = 0
Query:    3 IYNRKIGEDGKVEKYKCSLVAHGNCQIKGIHYQEALSPAPAVARTRMVLSLAAIQDWEV 61
            +Y  K   DG +E+YK  LVA G  Q++G+ Y+E  +P   +   R++LSLAA Q+W +
Sbjct:  812 VYKIKYNPDGTIERYKARLVAKGYSQVEGLDYRETFAPVAKLTTVRVLLSLAAQQNWHL 870          
BLAST of mRNA_H-paniculata_contig51307.12441.1 vs. uniprot
Match: A0A2Z6N0G5_TRISU (Uncharacterized protein n=1 Tax=Trifolium subterraneum TaxID=3900 RepID=A0A2Z6N0G5_TRISU)

HSP 1 Score: 56.6 bits (135), Expect = 8.100e-8
Identity = 29/59 (49.15%), Postives = 34/59 (57.63%), Query Frame = 0
Query:    3 IYNRKIGEDGKVEKYKCSLVAHGNCQIKGIHYQEALSPAPAVARTRMVLSLAAIQDWEV 61
            IY  K  E G++EKYK  LVA G  Q  GI Y E  +P       R+VLSLAA Q+W V
Sbjct:  870 IYKTKYNEKGEIEKYKARLVAKGYSQQYGIDYNEVFAPVARWDTIRLVLSLAASQNWSV 928          
BLAST of mRNA_H-paniculata_contig51307.12441.1 vs. uniprot
Match: A0A540NMU0_MALBA (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Malus baccata TaxID=106549 RepID=A0A540NMU0_MALBA)

HSP 1 Score: 55.1 bits (131), Expect = 9.680e-8
Identity = 26/59 (44.07%), Postives = 34/59 (57.63%), Query Frame = 0
Query:    3 IYNRKIGEDGKVEKYKCSLVAHGNCQIKGIHYQEALSPAPAVARTRMVLSLAAIQDWEV 61
            +Y  K  +DGKV +YK  LVA G  Q  G+ Y E  SP       R+VLSLAA+  W++
Sbjct:   99 VYKLKKDQDGKVSRYKARLVAQGFSQEHGLEYDETFSPVVRHTTVRLVLSLAAMNKWDL 157          
BLAST of mRNA_H-paniculata_contig51307.12441.1 vs. uniprot
Match: A0A5A7TC06_CUCME (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Cucumis melo var. makuwa TaxID=1194695 RepID=A0A5A7TC06_CUCME)

HSP 1 Score: 56.2 bits (134), Expect = 1.090e-7
Identity = 26/59 (44.07%), Postives = 35/59 (59.32%), Query Frame = 0
Query:    3 IYNRKIGEDGKVEKYKCSLVAHGNCQIKGIHYQEALSPAPAVARTRMVLSLAAIQDWEV 61
            +Y  K   DG +EK+K  LVA G+ Q  GI+++E  SP       R+VL+LAA Q W V
Sbjct:  486 VYKTKFAADGSLEKHKARLVAKGHAQQHGINFEETFSPVARFETVRVVLALAAQQQWSV 544          
BLAST of mRNA_H-paniculata_contig51307.12441.1 vs. uniprot
Match: A0A1J3EM18_NOCCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Noccaea caerulescens TaxID=107243 RepID=A0A1J3EM18_NOCCA)

HSP 1 Score: 55.8 bits (133), Expect = 1.510e-7
Identity = 25/57 (43.86%), Postives = 35/57 (61.40%), Query Frame = 0
Query:    3 IYNRKIGEDGKVEKYKCSLVAHGNCQIKGIHYQEALSPAPAVARTRMVLSLAAIQDW 59
            +Y  K+ E G+V+KYK  LVA G  Q +G+ Y E  +P       RM+L+LAA +DW
Sbjct:  589 VYKTKLNERGEVDKYKARLVAKGYAQQQGVDYNEVFAPVARWDTIRMILALAAQEDW 645          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig51307.12441.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI00092FCD172.270e-1047.46uncharacterized protein LOC109338179 n=1 Tax=Lupin... [more]
A0A1S4A739_TOBAC2.240e-847.37uncharacterized mitochondrial protein AtMg00820-li... [more]
A0A151S309_CAJCA4.300e-842.37Retrovirus-related Pol polyprotein from transposon... [more]
A0A2Z6NK18_TRISU5.920e-850.85Uncharacterized protein n=3 Tax=Trifolium subterra... [more]
A0A6L2LLF6_TANCI8.000e-849.12Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A2P6S8W7_ROSCH8.090e-840.68Putative RNA-directed DNA polymerase n=1 Tax=Rosa ... [more]
A0A2Z6N0G5_TRISU8.100e-849.15Uncharacterized protein n=1 Tax=Trifolium subterra... [more]
A0A540NMU0_MALBA9.680e-844.07Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A5A7TC06_CUCME1.090e-744.07Retrovirus-related Pol polyprotein from transposon... [more]
A0A1J3EM18_NOCCA1.510e-743.86Retrovirus-related Pol polyprotein from transposon... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 3..61
e-value: 3.3E-8
score: 33.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig51307contigH-paniculata_contig51307:1065..1247 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig51307.12441.1mRNA_H-paniculata_contig51307.12441.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig51307 921..1247 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig51307.12441.1 ID=prot_H-paniculata_contig51307.12441.1|Name=mRNA_H-paniculata_contig51307.12441.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=61bp
MMIYNRKIGEDGKVEKYKCSLVAHGNCQIKGIHYQEALSPAPAVARTRMV
LSLAAIQDWEV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2