prot_H-paniculata_contig5126.12435.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5126.12435.1
Unique Nameprot_H-paniculata_contig5126.12435.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length290
Homology
BLAST of mRNA_H-paniculata_contig5126.12435.1 vs. uniprot
Match: D8LGG0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGG0_ECTSI)

HSP 1 Score: 323 bits (827), Expect = 7.240e-108
Identity = 197/289 (68.17%), Postives = 219/289 (75.78%), Query Frame = 0
Query:    1 MNPGQEMPTPRTTRRFETTSFTGTEYVASRRSEVPDRPTMRRVLQERKLHNTRTSVALGSAKIKYESDAMSRQKDILGAPPRGPDEKRNKELKQALTRTHFTFGDEPVVYERTSRLPDPTGHLEDYTGILNTXXXXXXXXXXXXXXXXXXXXRTMAADQMNIQIPEGDDREAQLERNRLLKAALTRTHFKFGEEEMLWTTDYRTGFHWQVKLAGNAGLAKEVXXXXXXXXXXXXXXXXXXETDAMRTQRVDGGVMATVEERQLQTDKNKALKKQLQSTHYEIGTDEDYM 289
            MN G+EMP+PR T+RFETTS  GTEYVASRR EVPDR TM R L++RKL NT+ SVA GSAKI YESDAMSRQKDILGAPPRG DEKRNKELKQALTRTHFTFG+EP+VYERTS LPDPTGHL+DYTG+LNTXXXXXXXXXXXXXXXXXXXXRTMA DQM++Q+P+G+DR  QLE+NR LK                            VKLAGN GLAKEV                  +TDAMRTQR  GG++AT EERQ Q DKN+ALKKQLQ+THYEIGTD+DYM
Sbjct:   12 MNAGEEMPSPRATKRFETTSLAGTEYVASRRGEVPDRGTMIRELEQRKLRNTQASVAFGSAKILYESDAMSRQKDILGAPPRGEDEKRNKELKQALTRTHFTFGEEPMVYERTSTLPDPTGHLDDYTGVLNTXXXXXXXXXXXXXXXXXXXXRTMATDQMDLQVPQGEDRGVQLEKNRQLK----------------------------VKLAGNRGLAKEVKADLSRTHFTLGNHKFDWQTDAMRTQRASGGMVATAEERQAQIDKNRALKKQLQTTHYEIGTDDDYM 272          
BLAST of mRNA_H-paniculata_contig5126.12435.1 vs. uniprot
Match: A0A835YW84_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YW84_9STRA)

HSP 1 Score: 137 bits (344), Expect = 7.610e-35
Identity = 106/297 (35.69%), Postives = 135/297 (45.45%), Query Frame = 0
Query:   44 LQERKLHNTRTSVALGSAKIKYESDAMSR-------------------QKDILGAPPRGPDEKRNKELKQALTRTHFTFGDEPVVYERTSRLPDPTGHLEDYTGILNTXXXXXXXXXXXXXXXXXXXXRT-----------------MAADQMNIQIPEG-----------DDREAQLERNRLLKAALTRTHFKFGEEEMLWTTDYRTGFHW---QVKLAGNAGLAKEVXXXXXXXXXXXXXXXXXXETDAMRTQR-VDGGVMATVEERQLQTDKNKALKKQLQSTHYEIGTDEDYM 289
            L  RKL+NTRTS+ALGSA   YE+DA  +                   QKDIL +   G D + N+ LK  LTRT F+ GDE V Y+R S LPDPTG L ++TG+LN                                         AA   +    EG            D +A L+ NR LK ALTRT+  FG+E   + +DY+ GF +   +VK AG A L+KEV                  ETDA R  R  +    +  EE   Q + N+ LK+ LQ T+Y IGTD DYM
Sbjct:    5 LHRRKLNNTRTSIALGSAPTVYETDAQGQLPAPMYATLHCGRYESQAHQKDILSSHSAGADREHNRLLKAQLTRTTFSLGDERVDYQRVSALPDPTGRLHEFTGVLNAEVKEMMKRSNMYFGEPGGNFAKGHVLRNPALLLRLPLPGNAAPSYDTAAHEGMQAVGASGVAAADMQATLQHNRDLKVALTRTNLNFGDEVPEYVSDYKRGFKYDADEVKSAGRACLSKEVKDDLRRSHFKFGTDPVVWETDARRNMRQAEQAEHSGPEEVARQREHNRLLKQSLQRTNYAIGTDADYM 301          
BLAST of mRNA_H-paniculata_contig5126.12435.1 vs. uniprot
Match: A0A7S2FEP3_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FEP3_9STRA)

HSP 1 Score: 77.8 bits (190), Expect = 6.680e-13
Identity = 48/102 (47.06%), Postives = 59/102 (57.84%), Query Frame = 0
Query:   14 RRFETTSFTGTEYVASRRSEVPDRPTMRRVLQERKLHNTRTSVALGSAKIKYESDAMSRQKDILGAPPRGPDEKRNKELKQALTRTHFTFG-DEPVVYERTS 114
            +RF TT  +  E VA RR EV +R  M   L+ RKL NT+TS+  GS  + YESDAM RQKDILG    G D K  KELK  L +++   G D    Y  T+
Sbjct:    4 KRFTTTLNSSLEAVAKRRDEVENRQQMSASLRGRKLANTQTSIVFGSDSVVYESDAMRRQKDILGNKSAGADAKACKELKLGLQKSNIAIGTDSDTSYSTTT 105          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5126.12435.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LGG0_ECTSI7.240e-10868.17Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YW84_9STRA7.610e-3535.69Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2FEP3_9STRA6.680e-1347.06Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5126contigH-paniculata_contig5126:772..7348 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5126.12435.1mRNA_H-paniculata_contig5126.12435.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5126 772..7366 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5126.12435.1 ID=prot_H-paniculata_contig5126.12435.1|Name=mRNA_H-paniculata_contig5126.12435.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=290bp
MNPGQEMPTPRTTRRFETTSFTGTEYVASRRSEVPDRPTMRRVLQERKLH
NTRTSVALGSAKIKYESDAMSRQKDILGAPPRGPDEKRNKELKQALTRTH
FTFGDEPVVYERTSRLPDPTGHLEDYTGILNTEVKNMIKGTNVSFGNEPT
VYRTMAADQMNIQIPEGDDREAQLERNRLLKAALTRTHFKFGEEEMLWTT
DYRTGFHWQVKLAGNAGLAKEVKADLSRTHFSMGNDKIEYETDAMRTQRV
DGGVMATVEERQLQTDKNKALKKQLQSTHYEIGTDEDYM*
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