prot_H-paniculata_contig5123.12433.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5123.12433.1
Unique Nameprot_H-paniculata_contig5123.12433.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length1124
Homology
BLAST of mRNA_H-paniculata_contig5123.12433.1 vs. uniprot
Match: A0A6H5L8A2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8A2_9PHAE)

HSP 1 Score: 200 bits (509), Expect = 1.540e-49
Identity = 166/372 (44.62%), Postives = 214/372 (57.53%), Query Frame = 0
Query:    7 GGGINGSLTPSR--KRYTPS----PILS-NAAAASTSNNALQYHSSSNGRAPPTWQ--GGHGVEHWKVDGPAEVGDGDRLAAG-AGISLQETEGRIRQLERAEFDLKMRLFYTEERLEEAAGGTDAVQLHREVAHAKRQRTQAEESLRAASAAATALHSKCEVLQSQVRDIESDRKSEREKREVIEAANVTRIKNHVRLLEDTLRAERAENARLRLIVGDPRPSGNHSFDEIFEQGGHARRFASRRRSMGDAFLESDSVTP----SGGMG--SREQRERRLTLETKVRSQDSSMRSLRAEITXXXXXXXXXXXXXXXXXXXXXALTQAAEQVACVEAEEIARLAVELEQAVREASSERYKRRTAEERLAAAQ 362
            G GINGSLTP+R  ++ T S    PI   +A+  + S +A Q    S G +    +   G G+      G          AAG  GI+LQ TE +I +LER EFDLK++LFY EE+LE AAGGTD +QLH+EV  AK  R QAEE  RAA  A + L +KC  LQ+QVRD+E+ R  +RE    +E  + T+++ H  LLED LRAERAEN RLR      R +   S+D     G    R + RRRS G+ +   D V P    +G  G  +RE  E    L  KVRSQDSS+RSLRA+++                      + +AAEQVACVEAEEIARLAV+LE+AVR A++E  KRR AE+ L AA+
Sbjct:   18 GEGINGSLTPARPPRQNTKSTHGIPIYPYDASNENASRHARQGDRGSAGLSAHVGEVVAGEGMPSGLRQGSRSSDPLTGCAAGKGGINLQATEAKIDELERGEFDLKLKLFYMEEQLELAAGGTDVLQLHKEVMEAKLHRAQAEERARAAGDALSGLEAKCRELQAQVRDVEAQRAKDRENWASLEGESETKLRKHTHLLEDALRAERAENQRLRAA----RDNRRRSWDVPGGSGEQQPRASPRRRSSGE-YEHVDQVGPRRVGNGSWGGLAREHHEHDRQLAAKVRSQDSSLRSLRADVSTLRRRLRTQAETLVKQREENTTVRRAAEQVACVEAEEIARLAVDLERAVRAANAEAEKRRHAEKCLQAAE 384          
BLAST of mRNA_H-paniculata_contig5123.12433.1 vs. uniprot
Match: D7FSW7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSW7_ECTSI)

HSP 1 Score: 199 bits (505), Expect = 2.980e-49
Identity = 190/470 (40.43%), Postives = 242/470 (51.49%), Query Frame = 0
Query:   78 AAGAGISLQETEGRIRQLERAEFDLKMRLFYTEERLEEAAGGTDAVQLHREVAHAK-----------RQRTQAEESLRAASAAATALHSKCEVLQSQVRDIESDRKSEREKREVIEAANVTRIKNHVRLLEDTLRAERAENARLRLIVGDPRPSGNHSFDEIFEQGGHARRFASRRRSMGDAFLESDSVTP----SGGMG--SREQRERRLTLETKVRSQDSSMRSLRAEITXXXXXXXXXXXXXXXXXXXXXALTQAAEQVACVEAEEIARLAVELEQAVREASSERYKRRTAEERLAAAQQHPARSTADKASGGDCNPPNTIVPS-SRTTEPRTPPSPPHDSPSPVDRRDSAHAERELENGARSSGEGRPIAIGEDIKGAMRGDNCVSGDARTRVGTRGDAKIVPTASSLTASTISSRGRSSTPPLKNINGSNNGARNRSSTSARGDDPEAARKEKRQPLGS-PPPKP 528
            AA  GI+LQ TE +I +LER EFDLK++LFY EE+LE AAGGTD +QLH+EV  AK           R R QAEE  +AA  A + L +KC  LQ+QVRD+E+ R  +RE   +++  + T++K H  LLED LR ERAEN RLR+     R +   S+D     G    R   RRRS G+ +     V P    SG  G  +RE  E+   L  KVRSQDSS+RSLRA+++                      + +AAEQVACVEAEEIARLAV+LE+AVR A++E  KRR AE+RL AA+     +TA       C+P   ++P   R   PR               R  A A RE     R    G   A G    G+  GD           G R     +P +     STI+SRGRS+    +   GS+ G         RG D E   K KR+P GS PPP P
Sbjct:   40 AANGGINLQATEAKIDELERGEFDLKLKLFYMEEQLELAAGGTDVLQLHKEVMEAKLSFVVTATAPARHRAQAEERAQAAGDALSGLEAKCRELQAQVRDVEAQRAKDRENWAMLDGESETKLKKHTHLLEDALRTERAENQRLRVA----RDNRRRSWDVPGGSGEQQPRAPPRRRSSGE-YEHVHQVGPRRVGSGSWGGLAREHHEQDRQLAAKVRSQDSSLRSLRADVSTLRRRLRTQAETLAKQREENTTVRRAAEQVACVEAEEIARLAVDLERAVRAANAEAEKRRHAEKRLQAAETRLLDATAG------CSP--LVLPRPERARSPRASAG-----------RVEAPALREAARVCRKPF-GPAAAEGCTPPGSPNGD-----------GERASGSSLPPSRGALGSTIASRGRSAAAARRKEEGSSAGXXXXXXXXPRGRDTET--KGKRRPWGSSPPPSP 471          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5123.12433.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L8A2_9PHAE1.540e-4944.62Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FSW7_ECTSI2.980e-4940.43Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 85..105
NoneNo IPR availableCOILSCoilCoilcoord: 157..177
NoneNo IPR availableCOILSCoilCoilcoord: 295..322
NoneNo IPR availableCOILSCoilCoilcoord: 122..149
NoneNo IPR availableCOILSCoilCoilcoord: 327..347

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5123contigH-paniculata_contig5123:4153..13127 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5123.12433.1mRNA_H-paniculata_contig5123.12433.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5123 4057..14401 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5123.12433.1 ID=prot_H-paniculata_contig5123.12433.1|Name=mRNA_H-paniculata_contig5123.12433.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=1124bp
MRRRSNGGGINGSLTPSRKRYTPSPILSNAAAASTSNNALQYHSSSNGRA
PPTWQGGHGVEHWKVDGPAEVGDGDRLAAGAGISLQETEGRIRQLERAEF
DLKMRLFYTEERLEEAAGGTDAVQLHREVAHAKRQRTQAEESLRAASAAA
TALHSKCEVLQSQVRDIESDRKSEREKREVIEAANVTRIKNHVRLLEDTL
RAERAENARLRLIVGDPRPSGNHSFDEIFEQGGHARRFASRRRSMGDAFL
ESDSVTPSGGMGSREQRERRLTLETKVRSQDSSMRSLRAEITTLTRRLRT
QAQSLERQKLELKALTQAAEQVACVEAEEIARLAVELEQAVREASSERYK
RRTAEERLAAAQQHPARSTADKASGGDCNPPNTIVPSSRTTEPRTPPSPP
HDSPSPVDRRDSAHAERELENGARSSGEGRPIAIGEDIKGAMRGDNCVSG
DARTRVGTRGDAKIVPTASSLTASTISSRGRSSTPPLKNINGSNNGARNR
SSTSARGDDPEAARKEKRQPLGSPPPKPKIRRENTVEHTFKPSHTGRRLA
ARNSFSSDRSSTTPAAISYTASSACNGIAQQPKVDKTDLQIFHGQVNSLS
GKEARGCSSSPQTTPRREIRKPVAGRVRTGAARPALSPAAAAGSGLRRKV
GELAKDRNGQVDNVGSIKLQNGTTHRGDVNSSTSGVARNGSGDDRVGKKP
ETRIGSDRDRMGKNPANQTESEDNRVGSNPTKSAASGSRKGGDRVGKKPA
NRTRSEDDRVGSNPAKSAASGSREGGDRVGKNTANRTGSEDSRAGSNTAK
SAASGSREGGDRVGKNTANRTGSEDNHAWSNTAKSAASGSQEGDNAAQHA
GQILTGSSPTLREDLQSGRETVRETNNPPVDEAQRFRCLGSDGDESVSGL
DALTLSADLTATVARELRLAVATSSPPTSGVTSEENKGFPVGNAALSQSQ
RQCSVAQDNPIEHAAEQPTKPWDRLDQTNSIGVDRCRVVVKGTTRSGEDV
FVSGRRSWSPRNDRCCVGVKGTIRSGEDMFVSGRRSWSPRNGGDNSVDSK
WKGIEIGTSVNSKEVAKFESDVRDLFQFLGVPREVRPEGRGQTVSDEAEA
RASAAIGHALALWGSAKDTRVRP*
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