prot_H-paniculata_contig11951.1242.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig11951.1242.1
Unique Nameprot_H-paniculata_contig11951.1242.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length111
Homology
BLAST of mRNA_H-paniculata_contig11951.1242.1 vs. uniprot
Match: A0A835ZBI9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBI9_9STRA)

HSP 1 Score: 82.0 bits (201), Expect = 2.660e-18
Identity = 36/61 (59.02%), Postives = 44/61 (72.13%), Query Frame = 0
Query:   19 ASAKWIRPPQVQHILNYKACHSAIRFGDLLSRPECVDLIQRLSVCERPFCCAHGRPSVVPL 79
            A  + + P  + HIL YKACH AIRFGDLLS+ +C +L+  LS C  PF CAHGRPS+VPL
Sbjct:   13 APVRGVIPSTIHHILKYKACHGAIRFGDLLSQEQCCELVHGLSQCRLPFQCAHGRPSMVPL 73          
BLAST of mRNA_H-paniculata_contig11951.1242.1 vs. uniprot
Match: A0A0X8HSQ0_9SACH (HEL134Wp n=1 Tax=Eremothecium sinecaudum TaxID=45286 RepID=A0A0X8HSQ0_9SACH)

HSP 1 Score: 78.6 bits (192), Expect = 1.080e-14
Identity = 43/92 (46.74%), Postives = 54/92 (58.70%), Query Frame = 0
Query:    2 QDLLGFLDHLRESVLPGA-----SAKWIR-----PPQVQHILNYKACHSAIRFGDLLSRPECVDLIQRLSVCERPFCCAHGRPSVVPLCVLG 83
            +DL   L     S+LP       S +W +     P  +  I N KAC SAI FGD L+R ECV L++RLS+C  PF CAHGRPSV+P+  LG
Sbjct:  599 RDLEAHLLVRSSSILPNPITDFNSLQWWKCKNAIPRLLMEIFNSKACRSAIMFGDFLTREECVQLVERLSLCNMPFQCAHGRPSVIPILELG 690          
BLAST of mRNA_H-paniculata_contig11951.1242.1 vs. uniprot
Match: F2U2F5_SALR5 (Uncharacterized protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2U2F5_SALR5)

HSP 1 Score: 75.5 bits (184), Expect = 1.320e-13
Identity = 32/58 (55.17%), Postives = 42/58 (72.41%), Query Frame = 0
Query:   22 KWIRPPQVQHILNYKACHSAIRFGDLLSRPECVDLIQRLSVCERPFCCAHGRPSVVPL 79
            +W  PP +Q ILN +ACH AI+FGD LS  +C D++  L+ C+ PF CAHGRPS+ PL
Sbjct:  782 RWSIPPTLQDILNTRACHGAIKFGDELSIAQCQDILSDLASCKLPFQCAHGRPSIAPL 839          
BLAST of mRNA_H-paniculata_contig11951.1242.1 vs. uniprot
Match: UPI000C76B178 (LOW QUALITY PROTEIN: DNA mismatch repair protein Mlh3-like n=1 Tax=Anoplophora glabripennis TaxID=217634 RepID=UPI000C76B178)

HSP 1 Score: 75.1 bits (183), Expect = 1.780e-13
Identity = 33/69 (47.83%), Postives = 51/69 (73.91%), Query Frame = 0
Query:   26 PPQVQHILNYKACHSAIRFGDLLSRPECVDLIQRLSVCERPFCCAHGRPSVVPLCVLGRMTPPGISRTT 94
            P  +Q+ILN +AC  AI+FGD LS  +C +++++LS+C+ PF CAHGRP++VPL  L  +T P + R++
Sbjct:  681 PKIIQNILNLEACRGAIKFGDKLSNNDCEEVLKKLSICDLPFQCAHGRPTLVPLITLN-LTNPTVGRSS 748          
BLAST of mRNA_H-paniculata_contig11951.1242.1 vs. uniprot
Match: A0A383W9Q8_TETOB (MutL_C domain-containing protein (Fragment) n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383W9Q8_TETOB)

HSP 1 Score: 75.1 bits (183), Expect = 1.820e-13
Identity = 50/105 (47.62%), Postives = 60/105 (57.14%), Query Frame = 0
Query:    3 DLLGFLDHLRESVLPGASAKWIRPPQVQHILNYKACHSAIRFGDLLSRPECVDLIQRLSVCERPFCCAHGRPSVVPLCVL----GRMTPPGISRTTVTAAALAGK 103
            DL  +L  L E+   G SA    PP V  +L  KAC SAI FG LLSR +CVDL+Q+L   E  FCCAHGRP+ VPL  L     RM     +R+   AA  AG+
Sbjct: 1000 DLQLYLHQLLET---GGSASQ-PPPGVVRVLKSKACRSAIMFGKLLSRQQCVDLVQQLGQTELCFCCAHGRPTTVPLVDLVALQRRMQQQAHARSLGQAAQQAGR 1100          
BLAST of mRNA_H-paniculata_contig11951.1242.1 vs. uniprot
Match: A0A7S2WDY4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WDY4_9STRA)

HSP 1 Score: 72.4 bits (176), Expect = 2.220e-13
Identity = 36/76 (47.37%), Postives = 43/76 (56.58%), Query Frame = 0
Query:    5 LGFLDHLRESVLPGASAKWIRPPQVQHILNYKACHSAIRFGDLLSRPECVDLIQRLSVCERPFCCAHGRPSVVPLC 80
            LG LD       P  +   + P   Q ILNY+ACHSAI FGD L + +C  L+  L+ C  PF CAHGRPS   LC
Sbjct:  102 LGVLD-------PAVAGIHVLPASFQRILNYRACHSAITFGDHLDQDQCSQLLASLATCALPFQCAHGRPSATVLC 170          
BLAST of mRNA_H-paniculata_contig11951.1242.1 vs. uniprot
Match: A0A6H5JXH6_9PHAE (MutL_C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXH6_9PHAE)

HSP 1 Score: 70.9 bits (172), Expect = 8.180e-13
Identity = 33/42 (78.57%), Postives = 36/42 (85.71%), Query Frame = 0
Query:    2 QDLLGFLDHLRESVLPGASAKWIRPPQVQHILNYKACHSAIR 43
            QD +GFL  LRESV PG SA+ +RPPQVQHILNYKACHSAIR
Sbjct:   93 QDFVGFLHFLRESVEPGQSARRLRPPQVQHILNYKACHSAIR 134          
BLAST of mRNA_H-paniculata_contig11951.1242.1 vs. uniprot
Match: A0A0L8R9Q4_SACEU (MLH3-like protein n=2 Tax=Saccharomyces TaxID=4930 RepID=A0A0L8R9Q4_SACEU)

HSP 1 Score: 73.2 bits (178), Expect = 8.380e-13
Identity = 36/57 (63.16%), Postives = 42/57 (73.68%), Query Frame = 0
Query:   27 PQVQH-ILNYKACHSAIRFGDLLSRPECVDLIQRLSVCERPFCCAHGRPSVVPLCVL 82
            P V H ILN KAC SAI FGD LSR EC+ L+ +LS C+ PF CAHGRPS+VP+  L
Sbjct:  658 PTVFHEILNSKACRSAIMFGDELSRQECIILVNKLSQCQNPFQCAHGRPSMVPIAEL 714          
BLAST of mRNA_H-paniculata_contig11951.1242.1 vs. uniprot
Match: K0K6B6_WICCF (DNA mismatch repair protein n=1 Tax=Wickerhamomyces ciferrii (strain ATCC 14091 / BCRC 22168 / CBS 111 / JCM 3599 / NBRC 0793 / NRRL Y-1031 F-60-10) TaxID=1206466 RepID=K0K6B6_WICCF)

HSP 1 Score: 73.2 bits (178), Expect = 8.390e-13
Identity = 32/57 (56.14%), Postives = 41/57 (71.93%), Query Frame = 0
Query:   26 PPQVQHILNYKACHSAIRFGDLLSRPECVDLIQRLSVCERPFCCAHGRPSVVPLCVL 82
            P  +  ++N KAC SA+ FG  LS+PEC  LI+ L  C++PF CAHGRPS+VPLC L
Sbjct:  671 PSIIMDLINSKACRSAVMFGKSLSKPECEQLIKELVKCKQPFQCAHGRPSIVPLCDL 727          
BLAST of mRNA_H-paniculata_contig11951.1242.1 vs. uniprot
Match: A0A167QHD9_9PEZI (Vacuolar protein sorting protein n=1 Tax=Sporothrix insectorum RCEF 264 TaxID=1081102 RepID=A0A167QHD9_9PEZI)

HSP 1 Score: 72.8 bits (177), Expect = 1.150e-12
Identity = 35/58 (60.34%), Postives = 41/58 (70.69%), Query Frame = 0
Query:   26 PPQVQHILNYKACHSAIRFGDLLSRPECVDLIQRLSVCERPFCCAHGRPSVVPLCVLG 83
            P  +  +LN KACHSAIRF D LSR  CV+L++ L  C  PF CAHGRPS+VPL  LG
Sbjct:  737 PQGILDLLNSKACHSAIRFNDSLSREACVNLLRALLRCSFPFQCAHGRPSMVPLLSLG 794          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig11951.1242.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZBI9_9STRA2.660e-1859.02Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A0X8HSQ0_9SACH1.080e-1446.74HEL134Wp n=1 Tax=Eremothecium sinecaudum TaxID=452... [more]
F2U2F5_SALR51.320e-1355.17Uncharacterized protein n=1 Tax=Salpingoeca rosett... [more]
UPI000C76B1781.780e-1347.83LOW QUALITY PROTEIN: DNA mismatch repair protein M... [more]
A0A383W9Q8_TETOB1.820e-1347.62MutL_C domain-containing protein (Fragment) n=1 Ta... [more]
A0A7S2WDY4_9STRA2.220e-1347.37Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A6H5JXH6_9PHAE8.180e-1378.57MutL_C domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A0L8R9Q4_SACEU8.380e-1363.16MLH3-like protein n=2 Tax=Saccharomyces TaxID=4930... [more]
K0K6B6_WICCF8.390e-1356.14DNA mismatch repair protein n=1 Tax=Wickerhamomyce... [more]
A0A167QHD9_9PEZI1.150e-1260.34Vacuolar protein sorting protein n=1 Tax=Sporothri... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR042120MutL, C-terminal domain, dimerisation subdomainGENE3D2.30.42.20coord: 19..82
e-value: 7.5E-12
score: 47.0
IPR028830DNA mismatch repair protein Mlh3PANTHERPTHR10073:SF47DNA MISMATCH REPAIR PROTEIN MLH3coord: 2..83
IPR038973DNA mismatch repair protein MutL/Mlh/PmsPANTHERPTHR10073DNA MISMATCH REPAIR PROTEIN MLH, PMS, MUTLcoord: 2..83
IPR037198MutL, C-terminal domain superfamilySUPERFAMILY118116DNA mismatch repair protein MutLcoord: 29..79

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig11951contigH-paniculata_contig11951:4641..7757 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig11951.1242.1mRNA_H-paniculata_contig11951.1242.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig11951 4366..7757 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig11951.1242.1 ID=prot_H-paniculata_contig11951.1242.1|Name=mRNA_H-paniculata_contig11951.1242.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=111bp
GQDLLGFLDHLRESVLPGASAKWIRPPQVQHILNYKACHSAIRFGDLLSR
PECVDLIQRLSVCERPFCCAHGRPSVVPLCVLGRMTPPGISRTTVTAAAL
AGKRTRGVVA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR042120MutL_C_dimsub
IPR028830Mlh3
IPR038973MutL/Mlh/Pms
IPR037198MutL_C_sf