mRNA_H-paniculata_contig5117.12424.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig5117.12424.1 vs. uniprot
Match: D7G1K9_ECTSI (Catalase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1K9_ECTSI) HSP 1 Score: 205 bits (522), Expect = 8.720e-59 Identity = 102/136 (75.00%), Postives = 112/136 (82.35%), Query Frame = 3
Query: 285 GPMRVDGNMTNAPNYFPNSFSGPKAAQASHSAWHKEKITGDMSRHPTGDIDNFTQVGEFFRRTLDEGGRQRLTDNIAGALSGAQEFIQKRAIANFAAADADYGRLISEKGNVLVL--DKRATEAVPRSLSPDATLP 686
GPMRVDGNMT+APNYFPNSFSGP AA SH+ WH E+ TGD++R+PTGD DNFTQ GEFFRRTLDEGGRQRLTDNIAGALSGAQEFIQKRAIANFAAADADYGRLISEK L A+ P+ L+P T+P
Sbjct: 387 GPMRVDGNMTDAPNYFPNSFSGPAAADPSHAGWHAERATGDVARYPTGDDDNFTQAGEFFRRTLDEGGRQRLTDNIAGALSGAQEFIQKRAIANFAAADADYGRLISEKIKALARAGGSAASRVAPQPLNPPRTVP 522
BLAST of mRNA_H-paniculata_contig5117.12424.1 vs. uniprot
Match: A0A7S2UIK2_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UIK2_9STRA) HSP 1 Score: 146 bits (368), Expect = 2.900e-37 Identity = 76/144 (52.78%), Postives = 98/144 (68.06%), Query Frame = 3
Query: 285 GPMRVDGNMTNAPNYFPNSFSGPKAAQASHSAWHKEKITGDMSRHPTGDIDNFTQVGEFFRRTLDEGGRQRLTDNIAGALSGAQEFIQKRAIANFAAADADYGRLISEKGNVLVLDKRATEA----------VPRSLSPDATLP 686
G M V N +PNYFPNSF GP+ QAS WH E +GD+ RH TGD DNF+Q G+FFR+ LD+G R+RLTDNIAG +S AQEFI++RAI+NFAAAD +GR+ISEK N ++ +K +++A PR L P + P
Sbjct: 271 GSMMVHTNGAGSPNYFPNSFQGPEPDQAS-GTWHSEVASGDVLRHETGDEDNFSQCGQFFRQVLDDGARERLTDNIAGHMSNAQEFIRQRAISNFAAADPSFGRMISEKINRILQEKGSSQAHRKRNVQPLYPPRRLPPKGSTP 413
BLAST of mRNA_H-paniculata_contig5117.12424.1 vs. uniprot
Match: A0A835YMK5_9STRA (Catalase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMK5_9STRA) HSP 1 Score: 145 bits (365), Expect = 3.630e-36 Identity = 77/137 (56.20%), Postives = 98/137 (71.53%), Query Frame = 3
Query: 285 GPMRVDGNMTNAPNYFPNSFSGPKAAQASHSAWHKEKI-TGDMSRHPTGDIDNFTQVGEFFRRTLDEGGRQRLTDNIAGALSGAQEFIQKRAIANFAAADADYGRLISEKGNVL--VLDKRATEAVPRSLSPDATLP 686
GPMR+D N ++P+YFPNSFSG +A S AWH +K+ TGD++R TGD DNF Q G F+R L E R++LTDNIAG LSGAQEFIQ+RAI+NFAAADADYGR I++K + K+ EA P L+P ++P
Sbjct: 387 GPMRLDDNQADSPHYFPNSFSGAQAD--SSQAWHVDKLPTGDVARFDTGDEDNFAQCGHFYRNVLTEEDREQLTDNIAGNLSGAQEFIQQRAISNFAAADADYGRRIAQKIAAIRRAPAKKTAEAAPAPLNPPRSVP 521
BLAST of mRNA_H-paniculata_contig5117.12424.1 vs. uniprot
Match: A0A7R9UAR8_9STRA (Catalase n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UAR8_9STRA) HSP 1 Score: 141 bits (355), Expect = 9.730e-35 Identity = 78/138 (56.52%), Postives = 86/138 (62.32%), Query Frame = 3
Query: 285 GPMRVDGNMTNAPNYFPNSFSGPKAAQASHSAWHKEKITGDMSRHPTGDIDNFTQVGEFFRRTLDEGGRQRLTDNIAGALSGAQEFIQKRAIANFAAADADYGRLISEKGNVLVLDKRA---TEAVPRSLSPDATLPS 689
GPM VD N APNYFPNSFSGP + AWH K TGD+ R+ GD DNF+Q GEF+R L+ R RLT NIAG L AQEFIQKRAIANFAAADADYGR I+EK L E LSP LP+
Sbjct: 387 GPMTVDANQGGAPNYFPNSFSGPAVMR--EEAWHAPKATGDVMRYEAGDEDNFSQCGEFYRSVLNAEERDRLTSNIAGHLVNAQEFIQKRAIANFAAADADYGRTIAEKVQALKATSSGGSWAERPSAPLSPPRPLPN 522
BLAST of mRNA_H-paniculata_contig5117.12424.1 vs. uniprot
Match: A0A7R9YDT7_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YDT7_9STRA) HSP 1 Score: 141 bits (355), Expect = 1.610e-34 Identity = 78/138 (56.52%), Postives = 86/138 (62.32%), Query Frame = 3
Query: 285 GPMRVDGNMTNAPNYFPNSFSGPKAAQASHSAWHKEKITGDMSRHPTGDIDNFTQVGEFFRRTLDEGGRQRLTDNIAGALSGAQEFIQKRAIANFAAADADYGRLISEKGNVLVLDKRA---TEAVPRSLSPDATLPS 689
GPM VD N APNYFPNSFSGP + AWH K TGD+ R+ GD DNF+Q GEF+R L+ R RLT NIAG L AQEFIQKRAIANFAAADADYGR I+EK L E LSP LP+
Sbjct: 437 GPMTVDANQGGAPNYFPNSFSGPAVMR--EEAWHAPKATGDVMRYEAGDEDNFSQCGEFYRSVLNAEERDRLTSNIAGHLVNAQEFIQKRAIANFAAADADYGRTIAEKVQALKATSSGGSWAERPSAPLSPPRPLPN 572
BLAST of mRNA_H-paniculata_contig5117.12424.1 vs. uniprot
Match: A0A7S1UH72_9STRA (Catalase n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UH72_9STRA) HSP 1 Score: 139 bits (351), Expect = 3.560e-34 Identity = 76/137 (55.47%), Postives = 89/137 (64.96%), Query Frame = 3
Query: 285 GPMRVDGNMTNAPNYFPNSFSGPKAAQASHSAWHKEKITGDMSRHPTGDIDNFTQVGEFFRRTLDEGGRQRLTDNIAGALSGAQEFIQKRAIANFAAADADYGRLISEKGNVLVLDKR--ATEAVPRSLSPDATLPS 689
GPM VD N APNYFPNSFSGP A Q S AWH +TGD+ R+ TGD DNF+Q G F+R L + RLT NIAG ++ AQ+FI KRAIANFAAADADYGR I+EK + + A E LSP LP+
Sbjct: 388 GPMTVDANQGGAPNYFPNSFSGP-AVQKSE-AWHAHPVTGDVKRYETGDEDNFSQCGNFYRNVLSAAEKDRLTSNIAGHMANAQDFIVKRAIANFAAADADYGRSIAEKVAAIQAQRAPYAAERPAAPLSPPRALPN 522
BLAST of mRNA_H-paniculata_contig5117.12424.1 vs. uniprot
Match: W7T2K9_9STRA (Catalase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T2K9_9STRA) HSP 1 Score: 136 bits (342), Expect = 5.760e-33 Identity = 71/120 (59.17%), Postives = 84/120 (70.00%), Query Frame = 3
Query: 264 IR*RAETGPMRVDGNMTNAPNYFPNSFSGPKAAQASHSAWHKEKITGDMSRHPTGDIDNFTQVGEFFRRTLDEGGRQRLTDNIAGALSGAQEFIQKRAIANFAAADADYGRLISEKGNVL 623
+R GPM VDGN T APNYFPNSFSGP A+ + A H++ GD++R+ T D DNFTQ G F+R LDEG R RLT NIAG L AQ+FIQKRA+ANFAAAD DYG I+ K + L
Sbjct: 382 VRHYQRDGPMCVDGNQTGAPNYFPNSFSGP--AEDASQALHRDVGVGDVARYNTADDDNFTQAGCFYREVLDEGARDRLTSNIAGHLVAAQDFIQKRAVANFAAADRDYGARIARKMDAL 499
BLAST of mRNA_H-paniculata_contig5117.12424.1 vs. uniprot
Match: A0A7S1DAZ8_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1DAZ8_CYCTE) HSP 1 Score: 133 bits (335), Expect = 1.190e-32 Identity = 72/137 (52.55%), Postives = 89/137 (64.96%), Query Frame = 3
Query: 285 GPMRVDGNMTNAPNYFPNSFSGPKAAQASHSAWHKEKITGDMSRHPTGDIDNFTQVGEFFRRTLDEGGRQRLTDNIAGALSGAQEFIQKRAIANFAAADADYGRLISEK-GNVLVLDKRATEA-VPRSLSPDATLPS 689
G M N APNYFPNSF+GP + WH + +TGD+ R TGD DNF+Q GEFFR LDEGGR+RLTDNIA +S A F+++RAIANF+AAD YGR+I EK +L K +E V SLSP +P+
Sbjct: 257 GTMMTTANGGGAPNYFPNSFNGPITSPVG--TWHSDSVTGDVVRIETGDEDNFSQCGEFFRNVLDEGGRERLTDNIASHISAAPPFVRERAIANFSAADVKYGRMIREKVAAILRKPKPVSEGKVVASLSPPRVVPA 391
BLAST of mRNA_H-paniculata_contig5117.12424.1 vs. uniprot
Match: A0A7S2V427_9STRA (Catalase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V427_9STRA) HSP 1 Score: 130 bits (326), Expect = 1.070e-30 Identity = 69/134 (51.49%), Postives = 89/134 (66.42%), Query Frame = 3
Query: 285 GPMRVDGNMTNAPNYFPNSFSGPKAAQASHSAWHKEKITGDMSRHPTGDIDNFTQVGEFFRRTLDEGGRQRLTDNIAGALSGAQEFIQKRAIANFAAADADYGRLISEKGNVLVLDKRATEAVPRSLSPDATLP 686
GPM +D N APNYFPNSFSGP+ A H+ WH + ++GD++R TGD DNFTQ G F+ + LD R+RLTDNIAG + AQEF+QKRAIANFAAA +YG I+EK + +L+ + PR + P
Sbjct: 387 GPMTMD-NQGAAPNYFPNSFSGPETAP--HAEWHADPLSGDVARRDTGDEDNFTQAGIFYSQVLDAAARERLTDNIAGHMVEAQEFLQKRAIANFAAAHPEYGAKIAEK--IAILNASRKPSGPRPAAAPLNPP 515
BLAST of mRNA_H-paniculata_contig5117.12424.1 vs. uniprot
Match: A0A7S3M8J1_9STRA (Catalase n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M8J1_9STRA) HSP 1 Score: 129 bits (324), Expect = 2.550e-30 Identity = 80/165 (48.48%), Postives = 98/165 (59.39%), Query Frame = 3
Query: 240 CPFVTPLLIR*RAETGPMRVDGNMTNAPNYFPNSFSGPKAAQAS---HSAWHKE----KITGDMSRHPTG--DIDNFTQVGEFFRRTLDEGGRQRLTDNIAGALSGAQEFIQKRAIANFAAADADYGRLISEKGNVLVLDKRATEA-VPRS-----LSPDATLPS 689
CP+ T + G MRVDGN APNYFPNSF A AS ++AWH E + ++R+ TG D DNFTQ G F+R+ L R+RLTDNIAG L AQ+FIQ RAIANFAAADA+YGR I EK + L K+ A P+ LSP +LP+
Sbjct: 380 CPYATQHGVHNAQRDGVMRVDGNQAGAPNYFPNSFGSAAPATASTTTNAAWHTEPSARSLAETVARYETGGNDQDNFTQAGLFYRKVLSAAERERLTDNIAGHLVAAQDFIQTRAIANFAAADANYGRSIKEK--IAALKKKQDSAKAPKECPAAKLSPARSLPT 542 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5117.12424.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig5117.12424.1 >prot_H-paniculata_contig5117.12424.1 ID=prot_H-paniculata_contig5117.12424.1|Name=mRNA_H-paniculata_contig5117.12424.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=136bp MRVDGNMTNAPNYFPNSFSGPKAAQASHSAWHKEKITGDMSRHPTGDIDNback to top mRNA from alignment at H-paniculata_contig5117:6376..9299- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig5117.12424.1 ID=mRNA_H-paniculata_contig5117.12424.1|Name=mRNA_H-paniculata_contig5117.12424.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2924bp|location=Sequence derived from alignment at H-paniculata_contig5117:6376..9299- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig5117:6376..9299- >mRNA_H-paniculata_contig5117.12424.1 ID=mRNA_H-paniculata_contig5117.12424.1|Name=mRNA_H-paniculata_contig5117.12424.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=816bp|location=Sequence derived from alignment at H-paniculata_contig5117:6376..9299- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |