prot_H-paniculata_contig5116.12421.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5116.12421.1
Unique Nameprot_H-paniculata_contig5116.12421.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length333
Homology
BLAST of mRNA_H-paniculata_contig5116.12421.1 vs. uniprot
Match: D8LBK3_ECTSI (SH3 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBK3_ECTSI)

HSP 1 Score: 332 bits (851), Expect = 6.080e-101
Identity = 194/269 (72.12%), Postives = 225/269 (83.64%), Query Frame = 0
Query:    3 QQVYADVQRARKALGFLSKAVEKIRSGTIKSEMFEELKERLEQAADAAHEEYCDAVKDAKPANEYAEHAVALMDSAKLVHQELDALGTAVKERYVKVFHNTREGAL---EPADTDETLLMSALEVLLMISSNAQEMASRAADNARLDMQTALQEVAKAEKIIRRVELEERRARSECDAAEGISEESELTFDCPFGEWGEGMREYAADNLEVFRKGGKYRLHLDKNVFRGTEDILMMATLLSKVQLLRDLKALKMQAKVEEQKRQESLMQ 268
            ++V ADVQRARKALGFLSKAVEKIRSGTI ++MF ELKERLE AADAAHEEYCDAVKDAKPANEYAE AV+LM+SA+ + +ELD LGT VK+R VKV HN+  GA+   EPADT+E+LL+SALEV+L I++NAQE+A+RAADNAR DMQTAL+EVA AEKIIRRVELEERRAR+ECD AE   EE  L   C FGEW +  + +  +NLE FRK GKYRLHLDK   RGTED+LMMATL+SKVQLLRDL+ L+ +AK EE KRQESLMQ
Sbjct:  751 REVRADVQRARKALGFLSKAVEKIRSGTIATDMFGELKERLEAAADAAHEEYCDAVKDAKPANEYAEQAVSLMESAEQLFEELDILGTGVKDR-VKVVHNSGGGAMGEMEPADTEESLLVSALEVVLAIAANAQELAARAADNARFDMQTALEEVATAEKIIRRVELEERRARTECDEAEEKEEEI-LIAGCVFGEWADDAKLHGIENLEKFRKAGKYRLHLDKTGTRGTEDMLMMATLVSKVQLLRDLRELQAEAKAEELKRQESLMQ 1017          
BLAST of mRNA_H-paniculata_contig5116.12421.1 vs. uniprot
Match: A0A836CBE7_9STRA (SH3 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBE7_9STRA)

HSP 1 Score: 164 bits (415), Expect = 2.100e-41
Identity = 136/394 (34.52%), Postives = 176/394 (44.67%), Query Frame = 0
Query:    3 QQVYADVQRARKALGFLSKAVEKIRSGTIKSEMFEELKERLEQAADAAHEEYCDAVKDAKPANEYAEHAVALMDSAKLVH-------------------------------------------------------------------------------------------QELDALGTAVKERYVKVFHNTREG-ALEPADTDE----------TLLMSALEVLLMISSNAQEMASRAADNARLDMQTALQEVAKAEKIIRRVELEERRARSECDA---------------------AEGISEESELTFDCPFGEWGEGMREYAADNLEVFRKGGKYRLHLDKNVFR-------------------------GTEDILMMATLLSKVQLLRDL 248
            ++ +ADVQRARKALGF+SKAV KIR G IK + F++L ERL+ AADAAHEEY DAV+DAKPA  +A  A+  M++A                                                                                               ++LD LGTAV +R   V  +   G A + A +D+           L+  A+EV L +++NA E+ASRA DNAR DMQ AL EVAKAEKII+ VEL+ERRAR+ECDA                      +G   + +L  DCPF  W   MRE    NL  F K G+YR+++D   F+                         G ED +MM  LL+KVQL+RDL
Sbjct:  872 REAHADVQRARKALGFISKAVVKIRKGGIKPDKFDQLAERLDAAADAAHEEYRDAVRDAKPAGAHAADALRHMEAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELKLCVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDLDELGTAVYDRIKVVEEDEDLGLAADAAGSDDPKARTKKRELALVQEAIEVALQMANNAYELASRACDNARFDMQAALAEVAKAEKIIKHVELKERRARNECDAXXXXXXXXXXXXXXXXXXXXXVQGCPPDEDLPDDCPFATWSAEMRELMETNLAKFVKDGQYRVNIDNRTFKLKXXXXXXXXXXXXXXXXXXXXXXQGPEDCMMMVVLLAKVQLIRDL 1265          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5116.12421.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LBK3_ECTSI6.080e-10172.12SH3 domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A836CBE7_9STRA2.100e-4134.52SH3 domain-containing protein n=1 Tax=Tribonema mi... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 140..174
NoneNo IPR availableCOILSCoilCoilcoord: 241..261
NoneNo IPR availableCOILSCoilCoilcoord: 33..53

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5116contigH-paniculata_contig5116:217..13850 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5116.12421.1mRNA_H-paniculata_contig5116.12421.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5116 217..13850 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5116.12421.1 ID=prot_H-paniculata_contig5116.12421.1|Name=mRNA_H-paniculata_contig5116.12421.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=333bp
MIQQVYADVQRARKALGFLSKAVEKIRSGTIKSEMFEELKERLEQAADAA
HEEYCDAVKDAKPANEYAEHAVALMDSAKLVHQELDALGTAVKERYVKVF
HNTREGALEPADTDETLLMSALEVLLMISSNAQEMASRAADNARLDMQTA
LQEVAKAEKIIRRVELEERRARSECDAAEGISEESELTFDCPFGEWGEGM
REYAADNLEVFRKGGKYRLHLDKNVFRGTEDILMMATLLSKVQLLRDLKA
LKMQAKVEEQKRQESLMQSNSKRRKRISSKGVIPDAVVERKPTPVRQQSS
VGAVTASAALAANRRGPPMRQQSSVVPVDTADE
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