prot_H-paniculata_contig5115.12418.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5115.12418.1
Unique Nameprot_H-paniculata_contig5115.12418.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length119
Homology
[Close]
BLAST of mRNA_H-paniculata_contig5115.12418.1 vs. uniprot
Match: A0A6H5K8K2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8K2_9PHAE)

HSP 1 Score: 111 bits (277), Expect = 3.050e-27
Identity = 55/116 (47.41%), Postives = 79/116 (68.10%), Query Frame = 0 
Query:    3 RPDISSAVCTTAKRCENPGMVYWKAVVKILEYARRTQGIGITYGGDRNREIRMRAFVESDNVTCRDTRRSVSGGTVLPGGDVISWFSRAQETAAAETSEAQYVALSEIVKELLFLR 118
            RPDI++AV   A+ C +P MV+WKA + IL Y RRT  +GIT+       + M+ FV++D V     RRSVSGG V+ GG  ++WFSR Q+     T+EA+YVA+++++KE+LFLR
Sbjct:   87 RPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADYVRKAADRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLR 202
[Close]
BLAST of mRNA_H-paniculata_contig5115.12418.1 vs. uniprot
Match: A0A6H5KP70_9PHAE (Uncharacterized protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP70_9PHAE)

HSP 1 Score: 110 bits (276), Expect = 4.930e-27
Identity = 54/116 (46.55%), Postives = 79/116 (68.10%), Query Frame = 0 
Query:    3 RPDISSAVCTTAKRCENPGMVYWKAVVKILEYARRTQGIGITYGGDRNREIRMRAFVESDNVTCRDTRRSVSGGTVLPGGDVISWFSRAQETAAAETSEAQYVALSEIVKELLFLR 118
            RPDI++AV   A+ C +P MV+WKA + IL Y RRT  +GIT+       + M+ FV++D  +    RRSVSGG V+ GG  ++WFSR Q+     T+EA+YVA+++++KE+LFLR
Sbjct:  115 RPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADYASKATDRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLR 230
[Close]
BLAST of mRNA_H-paniculata_contig5115.12418.1 vs. uniprot
Match: A0A6H5KJP2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJP2_9PHAE)

HSP 1 Score: 111 bits (278), Expect = 8.320e-27
Identity = 54/116 (46.55%), Postives = 79/116 (68.10%), Query Frame = 0 
Query:    3 RPDISSAVCTTAKRCENPGMVYWKAVVKILEYARRTQGIGITYGGDRNREIRMRAFVESDNVTCRDTRRSVSGGTVLPGGDVISWFSRAQETAAAETSEAQYVALSEIVKELLFLR 118
            RPDI++AV   A+ C +P MV+WKA + IL Y RRT  +GIT+       + M+ FV++DN +    RRSVSGG V+ GG  ++WFSR Q+     T+E +YVA+++++KE+LFLR
Sbjct:  168 RPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADNASKAADRRSVSGGVVMCGGGGVTWFSRTQKCVTLSTTEVEYVAIADVLKEVLFLR 283
[Close]
BLAST of mRNA_H-paniculata_contig5115.12418.1 vs. uniprot
Match: A0A6H5L4G9_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4G9_9PHAE)

HSP 1 Score: 110 bits (276), Expect = 1.160e-26
Identity = 54/116 (46.55%), Postives = 79/116 (68.10%), Query Frame = 0 
Query:    3 RPDISSAVCTTAKRCENPGMVYWKAVVKILEYARRTQGIGITYGGDRNREIRMRAFVESDNVTCRDTRRSVSGGTVLPGGDVISWFSRAQETAAAETSEAQYVALSEIVKELLFLR 118
            RPDI++AV   A+ C +P MV+WKA + IL Y RRT  +GIT+       + M+ FV++D  +    RRSVSGG V+ GG  ++WFSR Q+     T+EA+YVA+++++KE+LFLR
Sbjct:  170 RPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADYASKATDRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLR 285
[Close]
BLAST of mRNA_H-paniculata_contig5115.12418.1 vs. uniprot
Match: A0A6H5L139_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L139_9PHAE)

HSP 1 Score: 111 bits (278), Expect = 1.510e-26
Identity = 55/116 (47.41%), Postives = 79/116 (68.10%), Query Frame = 0 
Query:    3 RPDISSAVCTTAKRCENPGMVYWKAVVKILEYARRTQGIGITYGGDRNREIRMRAFVESDNVTCRDTRRSVSGGTVLPGGDVISWFSRAQETAAAETSEAQYVALSEIVKELLFLR 118
            RPDI++AV   A+ C +P MV+WKA + IL Y RRT  +GIT+       + M+ FVE+D  +    RRSVSGG V+ GG  ++WFSR Q+     T+EA+YVA+++++KE+LFLR
Sbjct:  332 RPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVEADYASKAADRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLR 447
[Close]
BLAST of mRNA_H-paniculata_contig5115.12418.1 vs. uniprot
Match: A0A6H5KDB1_9PHAE (Uncharacterized protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDB1_9PHAE)

HSP 1 Score: 107 bits (266), Expect = 1.680e-26
Identity = 53/116 (45.69%), Postives = 78/116 (67.24%), Query Frame = 0 
Query:    3 RPDISSAVCTTAKRCENPGMVYWKAVVKILEYARRTQGIGITYGGDRNREIRMRAFVESDNVTCRDTRRSVSGGTVLPGGDVISWFSRAQETAAAETSEAQYVALSEIVKELLFLR 118
            RPDI++AV    + C +  MV+WKA + ILEY RRT  +GIT+       + M+ FV++D  +    RRSVSGG V+ GG  ++WFSR Q+     T+EA+YVA+++++KE+LFLR
Sbjct:    8 RPDIANAVRAEVRYCASRKMVHWKAALGILEYVRRTSWMGITFERGVVTGMSMQVFVDADYASKAADRRSVSGGLVMCGGVCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLR 123
[Close]
BLAST of mRNA_H-paniculata_contig5115.12418.1 vs. uniprot
Match: A0A6H5JEF2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=7 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEF2_9PHAE)

HSP 1 Score: 110 bits (276), Expect = 2.380e-26
Identity = 54/116 (46.55%), Postives = 79/116 (68.10%), Query Frame = 0 
Query:    3 RPDISSAVCTTAKRCENPGMVYWKAVVKILEYARRTQGIGITYGGDRNREIRMRAFVESDNVTCRDTRRSVSGGTVLPGGDVISWFSRAQETAAAETSEAQYVALSEIVKELLFLR 118
            RPDI++AV   A+ C +P MV+WKA + IL Y RRT  +GIT+       + M+ FV++D  +    RRSVSGG V+ GG  ++WFSR Q+     T+EA+YVA+++++KE+LFLR
Sbjct:  232 RPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADYASKATDRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLR 347
[Close]
BLAST of mRNA_H-paniculata_contig5115.12418.1 vs. uniprot
Match: A0A6H5K3H6_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3H6_9PHAE)

HSP 1 Score: 111 bits (277), Expect = 5.090e-26
Identity = 54/116 (46.55%), Postives = 79/116 (68.10%), Query Frame = 0 
Query:    3 RPDISSAVCTTAKRCENPGMVYWKAVVKILEYARRTQGIGITYGGDRNREIRMRAFVESDNVTCRDTRRSVSGGTVLPGGDVISWFSRAQETAAAETSEAQYVALSEIVKELLFLR 118
            RPDI++AV   A+ C +P MV+WKA + IL Y RRT  +GIT+       + M+ FV++D  +    RRSVSGG V+ GG  ++WFSR Q+     T+EA+YVA+++++KE+LFLR
Sbjct:  768 RPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFENGVVTGMSMQVFVDADYASKAADRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLR 883
[Close]
BLAST of mRNA_H-paniculata_contig5115.12418.1 vs. uniprot
Match: A0A6H5KD11_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD11_9PHAE)

HSP 1 Score: 110 bits (276), Expect = 6.880e-26
Identity = 54/116 (46.55%), Postives = 79/116 (68.10%), Query Frame = 0 
Query:    3 RPDISSAVCTTAKRCENPGMVYWKAVVKILEYARRTQGIGITYGGDRNREIRMRAFVESDNVTCRDTRRSVSGGTVLPGGDVISWFSRAQETAAAETSEAQYVALSEIVKELLFLR 118
            RPDI++AV   A+ C +P MV+WKA + IL Y RRT  +GIT+       + M+ FV++D  +    RRSVSGG V+ GG  ++WFSR Q+     T+EA+YVA+++++KE+LFLR
Sbjct:  122 RPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADYASKATDRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLR 237
[Close]
BLAST of mRNA_H-paniculata_contig5115.12418.1 vs. uniprot
Match: A0A6H5JKY9_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKY9_9PHAE)

HSP 1 Score: 110 bits (275), Expect = 9.590e-26
Identity = 54/116 (46.55%), Postives = 79/116 (68.10%), Query Frame = 0 
Query:    3 RPDISSAVCTTAKRCENPGMVYWKAVVKILEYARRTQGIGITYGGDRNREIRMRAFVESDNVTCRDTRRSVSGGTVLPGGDVISWFSRAQETAAAETSEAQYVALSEIVKELLFLR 118
            RPDI++AV   A+ C +P MV+WKA + IL Y RRT  +GIT+       I M+ F+++D  +    RRSVSGG V+ GG  ++WFSR Q+     T+EA+YVA+++++KE+LFLR
Sbjct: 1212 RPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGISMQVFLDADYASKAADRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLR 1327
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5115.12418.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K8K2_9PHAE3.050e-2747.41Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KP70_9PHAE4.930e-2746.55Uncharacterized protein n=4 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KJP2_9PHAE8.320e-2746.55Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5L4G9_9PHAE1.160e-2646.55Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5L139_9PHAE1.510e-2647.41Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KDB1_9PHAE1.680e-2645.69Uncharacterized protein n=4 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JEF2_9PHAE2.380e-2646.55Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5K3H6_9PHAE5.090e-2646.55Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KD11_9PHAE6.880e-2646.55Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JKY9_9PHAE9.590e-2646.55Integrase catalytic domain-containing protein n=1 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 3..118
NoneNo IPR availablePANTHERPTHR11439:SF275coord: 3..118

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5115contigH-paniculata_contig5115:1448..1804 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5115.12418.1mRNA_H-paniculata_contig5115.12418.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5115 1190..1885 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5115.12418.1 ID=prot_H-paniculata_contig5115.12418.1|Name=mRNA_H-paniculata_contig5115.12418.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=119bp
MMRPDISSAVCTTAKRCENPGMVYWKAVVKILEYARRTQGIGITYGGDRN
REIRMRAFVESDNVTCRDTRRSVSGGTVLPGGDVISWFSRAQETAAAETS
EAQYVALSEIVKELLFLR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039537Retrotran_Ty1/copia-like