prot_H-paniculata_contig51140.12416.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig51140.12416.1
Unique Nameprot_H-paniculata_contig51140.12416.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length73
Homology
BLAST of mRNA_H-paniculata_contig51140.12416.1 vs. uniprot
Match: A0A6H5JAT4_9PHAE (CAF1C_H4-bd domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAT4_9PHAE)

HSP 1 Score: 146 bits (368), Expect = 4.750e-40
Identity = 69/73 (94.52%), Postives = 71/73 (97.26%), Query Frame = 0
Query:    1 SLTVQWLPSVKAQEDKDYAVHKLILGTHTSGSEQNYLMVANVNLPVAGAEIDNRTYDDEKGEMGGFGGVHGKV 73
            SLTVQWLPSVK+QE KDYAVHKL+LGTHTSGSEQNYLMVANVNLPV GAEIDNRTYDDEKGEMGGFGGVHGKV
Sbjct:  114 SLTVQWLPSVKSQESKDYAVHKLVLGTHTSGSEQNYLMVANVNLPVPGAEIDNRTYDDEKGEMGGFGGVHGKV 186          
BLAST of mRNA_H-paniculata_contig51140.12416.1 vs. uniprot
Match: A0A7S1XXN3_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XXN3_9STRA)

HSP 1 Score: 105 bits (262), Expect = 3.580e-25
Identity = 52/73 (71.23%), Postives = 60/73 (82.19%), Query Frame = 0
Query:    1 SLTVQWLPSVKAQEDKDYAVHKLILGTHTSGSEQNYLMVANVNLPVAGAEIDNRTYDDEKGEMGGFGGVHGKV 73
            SLTVQW+P  +A + KD A HKLILGTHTSG E NYLM+A+V+LP+  AEID R YDDEKGE+GGFG VHGKV
Sbjct:   50 SLTVQWVPGSRAVQGKDVAEHKLILGTHTSG-EMNYLMLAHVHLPLPEAEIDARRYDDEKGEVGGFGAVHGKV 121          
BLAST of mRNA_H-paniculata_contig51140.12416.1 vs. uniprot
Match: A0A835ZEH9_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEH9_9STRA)

HSP 1 Score: 105 bits (261), Expect = 5.050e-25
Identity = 49/73 (67.12%), Postives = 55/73 (75.34%), Query Frame = 0
Query:    1 SLTVQWLPSVKAQEDKDYAVHKLILGTHTSGSEQNYLMVANVNLPVAGAEIDNRTYDDEKGEMGGFGGVHGKV 73
            SLTVQWLP V +  DKDY  HKLILGTHT  +EQNYLM+A VNLP    EID R YDDE+ E+GGFGGV  K+
Sbjct:   55 SLTVQWLPDVSSLPDKDYETHKLILGTHTEQNEQNYLMIATVNLPKEDTEIDARKYDDERDEVGGFGGVDNKI 127          
BLAST of mRNA_H-paniculata_contig51140.12416.1 vs. uniprot
Match: A0A7S2XZP9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZP9_9STRA)

HSP 1 Score: 103 bits (256), Expect = 5.830e-25
Identity = 48/73 (65.75%), Postives = 58/73 (79.45%), Query Frame = 0
Query:    1 SLTVQWLPSVKAQEDKDYAVHKLILGTHTSGSEQNYLMVANVNLPVAGAEIDNRTYDDEKGEMGGFGGVHGKV 73
            SLTVQWLP VK  E K +++H+ I+GTHTS SEQN+LMVA+VNLP+   E+D R Y DEK E+GGFGGV GKV
Sbjct:   53 SLTVQWLPDVKRPEGKTHSIHRFIVGTHTSNSEQNHLMVASVNLPLPDQELDVRKYHDEKNEIGGFGGVSGKV 125          
BLAST of mRNA_H-paniculata_contig51140.12416.1 vs. uniprot
Match: F2U3I1_SALR5 (Histone-binding protein RBBP4 n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2U3I1_SALR5)

HSP 1 Score: 104 bits (260), Expect = 6.770e-25
Identity = 50/73 (68.49%), Postives = 55/73 (75.34%), Query Frame = 0
Query:    1 SLTVQWLPSVKAQEDKDYAVHKLILGTHTSGSEQNYLMVANVNLPVAGAEIDNRTYDDEKGEMGGFGGVHGKV 73
            SLT QWLP V   E KDY+ H++ILGTHTSG E NYL+VANV LP + A ID R YDDEKGE GGFG V GKV
Sbjct:   49 SLTAQWLPDVTRPEGKDYSTHRIILGTHTSGDEPNYLIVANVQLPNSDATIDARKYDDEKGEYGGFGSVAGKV 121          
BLAST of mRNA_H-paniculata_contig51140.12416.1 vs. uniprot
Match: A0A7S3QKZ3_DUNTE (Hypothetical protein n=1 Tax=Dunaliella tertiolecta TaxID=3047 RepID=A0A7S3QKZ3_DUNTE)

HSP 1 Score: 103 bits (256), Expect = 2.180e-24
Identity = 46/73 (63.01%), Postives = 58/73 (79.45%), Query Frame = 0
Query:    1 SLTVQWLPSVKAQEDKDYAVHKLILGTHTSGSEQNYLMVANVNLPVAGAEIDNRTYDDEKGEMGGFGGVHGKV 73
            SLT+QWLP+ + QE KD++  KLILGTHTS +EQNYLM+A V LP+  +E+D R Y+DE+GE GGFG  HGKV
Sbjct:   43 SLTIQWLPNKEVQEGKDFSKQKLILGTHTSDNEQNYLMIAEVQLPLEESELDARQYEDERGESGGFGSAHGKV 115          
BLAST of mRNA_H-paniculata_contig51140.12416.1 vs. uniprot
Match: A0A7S0Z940_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Ostreococcus mediterraneus TaxID=1486918 RepID=A0A7S0Z940_9CHLO)

HSP 1 Score: 96.7 bits (239), Expect = 2.520e-24
Identity = 46/73 (63.01%), Postives = 51/73 (69.86%), Query Frame = 0
Query:    1 SLTVQWLPSVKAQEDKDYAVHKLILGTHTSGSEQNYLMVANVNLPVAGAEIDNRTYDDEKGEMGGFGGVHGKV 73
            SLTVQWLP      DKDY+  K+ILGTHTS  EQNYLM+A V LP+  AE+D R YDDE GE GGFG    KV
Sbjct:    9 SLTVQWLPDRVEHPDKDYSTQKMILGTHTSEHEQNYLMIAEVQLPLENAEVDGREYDDESGEAGGFGSGGAKV 81          
BLAST of mRNA_H-paniculata_contig51140.12416.1 vs. uniprot
Match: A0A7S0JEK8_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0JEK8_9EUKA)

HSP 1 Score: 103 bits (256), Expect = 2.730e-24
Identity = 46/73 (63.01%), Postives = 56/73 (76.71%), Query Frame = 0
Query:    1 SLTVQWLPSVKAQEDKDYAVHKLILGTHTSGSEQNYLMVANVNLPVAGAEIDNRTYDDEKGEMGGFGGVHGKV 73
            SLTVQWLP  +   +KDY+VH+++LGTHTS  EQNYLM+A V LP+   EID R YDDE+GE GGFGGV  K+
Sbjct:   55 SLTVQWLPDKRLPPNKDYSVHRMVLGTHTSEGEQNYLMIAEVRLPLEDTEIDARKYDDERGEAGGFGGVSAKI 127          
BLAST of mRNA_H-paniculata_contig51140.12416.1 vs. uniprot
Match: A0A5D6XN28_9STRA (CAF1C_H4-bd domain-containing protein (Fragment) n=2 Tax=Pythiaceae TaxID=4782 RepID=A0A5D6XN28_9STRA)

HSP 1 Score: 102 bits (254), Expect = 5.320e-24
Identity = 48/73 (65.75%), Postives = 56/73 (76.71%), Query Frame = 0
Query:    1 SLTVQWLPSVKAQEDKDYAVHKLILGTHTSGSEQNYLMVANVNLPVAGAEIDNRTYDDEKGEMGGFGGVHGKV 73
            SL+VQWLPS       DY+VHKL+LGTHTSGSEQN+LM+A V LP+   EID R +DDE  E+GGFGGV GKV
Sbjct:   52 SLSVQWLPSCHTSAGDDYSVHKLLLGTHTSGSEQNHLMIAEVRLPLEDTEIDARKFDDEAQELGGFGGVSGKV 124          
BLAST of mRNA_H-paniculata_contig51140.12416.1 vs. uniprot
Match: D8TN97_VOLCA (CAF1C_H4-bd domain-containing protein n=10 Tax=Chlamydomonadales TaxID=3042 RepID=D8TN97_VOLCA)

HSP 1 Score: 102 bits (253), Expect = 6.080e-24
Identity = 47/73 (64.38%), Postives = 56/73 (76.71%), Query Frame = 0
Query:    1 SLTVQWLPSVKAQEDKDYAVHKLILGTHTSGSEQNYLMVANVNLPVAGAEIDNRTYDDEKGEMGGFGGVHGKV 73
            SLTVQWLP  +    KDY+  KLILGTHTS +EQNYLM+A V LP+  +E+D R YDDE+ E+GGFGG HGKV
Sbjct:   44 SLTVQWLPDKEIVPGKDYSKQKLILGTHTSDNEQNYLMIAEVQLPLEESELDGRGYDDERNEVGGFGGAHGKV 116          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig51140.12416.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JAT4_9PHAE4.750e-4094.52CAF1C_H4-bd domain-containing protein n=1 Tax=Ecto... [more]
A0A7S1XXN3_9STRA3.580e-2571.23Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A835ZEH9_9STRA5.050e-2567.12WD40-repeat-containing domain protein n=1 Tax=Trib... [more]
A0A7S2XZP9_9STRA5.830e-2565.75Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
F2U3I1_SALR56.770e-2568.49Histone-binding protein RBBP4 n=1 Tax=Salpingoeca ... [more]
A0A7S3QKZ3_DUNTE2.180e-2463.01Hypothetical protein n=1 Tax=Dunaliella tertiolect... [more]
A0A7S0Z940_9CHLO2.520e-2463.01Hypothetical protein (Fragment) n=1 Tax=Ostreococc... [more]
A0A7S0JEK8_9EUKA2.730e-2463.01Hypothetical protein n=1 Tax=Calcidiscus leptoporu... [more]
A0A5D6XN28_9STRA5.320e-2465.75CAF1C_H4-bd domain-containing protein (Fragment) n... [more]
D8TN97_VOLCA6.080e-2464.38CAF1C_H4-bd domain-containing protein n=10 Tax=Chl... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022052Histone-binding protein RBBP4, N-terminalPFAMPF12265CAF1C_H4-bdcoord: 1..45
e-value: 3.7E-12
score: 46.3
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 1..73
e-value: 8.7E-14
score: 53.3
NoneNo IPR availablePANTHERPTHR22850WD40 REPEAT FAMILYcoord: 1..73
NoneNo IPR availablePANTHERPTHR22850:SF82HISTONE-BINDING PROTEIN RBBP7coord: 1..73

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig51140contigH-paniculata_contig51140:150..368 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig51140.12416.1mRNA_H-paniculata_contig51140.12416.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig51140 150..368 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig51140.12416.1 ID=prot_H-paniculata_contig51140.12416.1|Name=mRNA_H-paniculata_contig51140.12416.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=73bp
SLTVQWLPSVKAQEDKDYAVHKLILGTHTSGSEQNYLMVANVNLPVAGAE
IDNRTYDDEKGEMGGFGGVHGKV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022052Histone-bd_RBBP4_N
IPR015943WD40/YVTN_repeat-like_dom_sf