mRNA_H-paniculata_contig5114.12415.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig5114.12415.1
Unique NamemRNA_H-paniculata_contig5114.12415.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig5114.12415.1 vs. uniprot
Match: D7FQN9_ECTSI (Uncharacterized protein n=4 Tax=Ectocarpus TaxID=2879 RepID=D7FQN9_ECTSI)

HSP 1 Score: 577 bits (1488), Expect = 8.920e-185
Identity = 332/660 (50.30%), Postives = 409/660 (61.97%), Query Frame = 1
Query:    1 VERVDQAAPLP-RSNGWRYMRSHGVTYRCQAVFSTGFKIRIA-TSSYGSGHRWFNSNPLGGDPSLENFQSWANRVW*RGMIHPGDAEAWKTAFVHIEGGGHGQLVVSAADGTWRAILCWASAGRKIDVDHEGTRASVANLKVHVGIDSPSPHFRQLNRASFGHSLVRYKSLTVFGMAWKEQFLDFCPAVLVAYAWRDCHVGLLTQ--ERRRFGFRDVDPLAGVFIIFTIGRRPKKGITHVTPNALDGGNYFHKLFSILLERDVGPTEFDAWLSGEQLTPALKLQHLEKWLHMTKASVAVWSRRCSGVEVLGPVDKKASLRSPTLHIGVREGHVYRLVLDGPWGDR-----------------RFRRIAEAA-----PLRRGTKKRQQTGAAEPSLVSPTP*ARS*TRSSQSGTNIPLGSAREESTTRPTTRLRTGLRVRLSKN*CSTSTSATS----HAGATGTP*PYQHMISLSEHGAAQAWADWIRISSN-ATRLLA*SSCKTPSAESSTAGSWISGR--E*VQPVPPGAARGVLEEADRRGRRRIGISYG*EDWQCDIHGAHTAVLISMYTVPAFGYTDDVEEFDDHEIEDWTLYANKVDAVMVTVWYRDGFWALGALIMDETRLRVLEVRNVLETCGGSTFSYQCDALFFQGSQPV 1881
            VE+VDQAAPL  RSNGWRY+   G+TYR QAVF TGF++RI+  SS G G+RWFNS+PLGGDP+L NFQ+WA  V   GM+HP DAEAW+TAFV +EGGG GQLVVSAAD +WR I CWASAGR+I+VD +G   S+ NL+V  G+DS SP FRQLN A+FGH +VRY  +T FG  W++Q    C AVLVA  WRD  V LL +  ERRRFGFRDVDP  G F+I + G RPKKG      NALDGGNYF  L+SILLERD+G  EFD W+SG+   PAL L HLEKWLHMT ASV VWS R +G  +LGP D K +L+ PTLH+GVREGHVYRLVL+GPWGDR                 +FRRI+E       P   G   +  +  A+  +VS                 + +     +   +P  + + G +V  SK   +   +A      H    G       +I  +   A+    D      + ATRL+   +              +S +  + +  +     RG +  A+       G SYG EDWQCDI+GAHTA L++M TVP FG+ D+VEEFD H IEDWTLY  K+DA+  T WYRDGFWALGALI+DETRLRVLE RN LE CG S FS+QCDA+FF+G   V
Sbjct:   22 VEQVDQAAPLAGRSNGWRYLGPGGITYRRQAVFGTGFRVRISFPSSPGPGYRWFNSHPLGGDPNLYNFQTWARTVLQGGMVHPRDAEAWRTAFVEVEGGGLGQLVVSAADESWRVIFCWASAGREIEVDTQGIPISLVNLQVRSGLDSQSPFFRQLNIATFGHRVVRYAPITAFGKKWQKQLPGACLAVLVAEVWRDSQVYLLKKPKERRRFGFRDVDP-TGAFMISSRGGRPKKGAPVHNKNALDGGNYFRNLYSILLERDIGEVEFDTWVSGDAEPPALTLLHLEKWLHMTNASVVVWSHRGTGANILGPSDGKTNLQLPTLHVGVREGHVYRLVLEGPWGDRFGSSLDVAIDHSVRTYRKFRRISEMTVEEQEPDTTGFVTKTFSCVAD--IVSDI---------------MAINETGGDHNRQPVEKRKHGRKVSESKTWYAPPGTALDELMLHLHLAGVSCEAHGVIIRTWCSASMGGLDPDDFEPDQATRLIELHNALGLKFHRGVLDFRVSRQYSQSLLALLEVCWRGPIVGAEDAS----GSSYGREDWQCDINGAHTAALMNMETVPVFGHMDEVEEFDGHNIEDWTLYIIKLDALERT-WYRDGFWALGALILDETRLRVLEARNALELCGASDFSFQCDAVFFRGCSSV 658          
BLAST of mRNA_H-paniculata_contig5114.12415.1 vs. uniprot
Match: A0A6H5KSM3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSM3_9PHAE)

HSP 1 Score: 558 bits (1437), Expect = 1.600e-175
Identity = 346/835 (41.44%), Postives = 422/835 (50.54%), Query Frame = 1
Query:    1 VERVDQAAPLP-RSNGWRYMRSHGVTYRCQAVFSTGFKIRIATSSYGSGHRWFNSNPLGGDPSLENFQSWANRVW*RGMIHPGDAEAWKTAFVHIEGGGHGQLVVSAADGTWRAILCWASAGRKIDVDHEGTRASVANLKVHVGIDSPSPHFRQLNRASFGHSLVRYKSLTVFGMAWKEQFLDFCPAVLVAYAWRDCHVGLLTQERRRFGFRDVDPLAGVFIIFTIGRRPKKGITHVTPNALDGGNYFHKLFSILLERDVGPTEFDAWLSGEQLTPALKLQHLEKWLHMTKASVAVWSRRCSGVEVLGPVDKKASLRSPTLHIGVREGHVYRLVLDGPWGDR-----------------RFRRIAEAAPLRR-------GTKKRQQTGAAEPSLVSPTP*ARS*TRSSQSGTNIPLGSAREESTTRPTTRLRTGLRVRLSKN*CSTSTSATSHAGATGTP*PYQHMISLSEHGAAQAWADWIRISSNATRLLA*SSCKTPSAESSTAGSWISGRE*VQPVPPGAAR--------------GVLE---------------EADRRG-----RRRIGISYG*EDWQCDIHGAHTAVLISMYTVPAFGYTDDVEEFDDHEIEDWTLY--------------------------------------------------------------------------------------------------ANKVDAVMVT---------------------------------------------------VWYRDGFWALGALIMDETRLRVLEVRNVLETCGGSTFSYQCDALFFQGSQPV 1881
            VE+VDQA PLP R+NGWRY    GV YR QAVF TG+++RI+ +S G G+RWFNS+P GGDPSLENFQSWA R W RG++HP DA+AWKTAF+ +EGGG GQLVVSAAD TWRAILCW SAGR+I++DHEG  AS++NL+V  GI+S SP FRQLN ASFGH +VRY+ LT F M WK++    C AVLVA AWRDC + LL +ERRRFGFRDVDP+ G F+  T G R ++G T    NALDGGNYF  LFS+LL+RDVG  EFD WLSG    PAL L+ LEKWL+ T+A+V VWS R SG  VLGP+DKK  LR   LH+GVREGHVYRL LDGPW DR                 RFRRIAEA   +        G+KK   T      +VS                 + +  + EE+  +   R +     R S+     +T              + H++ +S  G   +++ W  +S  A  +   + C             + G +  +  P  A R              GVL+               E   RG         G SYG EDWQCDI+GAHTA L+SM  VP FG+ D+VEE+DDH IEDWTLY                                                                                                  A+++DAVMVT                                                    WYRDGFWALGALI+DETRLRVLE RN LE+CG   FSYQCDA+FF+GS  V
Sbjct:   26 VEQVDQAEPLPNRNNGWRYKGPRGVMYRRQAVFGTGYRVRISATSRGPGYRWFNSHPAGGDPSLENFQSWATRTWRRGLVHPRDADAWKTAFIDVEGGGRGQLVVSAADDTWRAILCWGSAGRRIEIDHEGIPASLSNLQVRAGIESSSPRFRQLNIASFGHRVVRYEPLTTFCMTWKKRLPGACLAVLVADAWRDCQLDLLIRERRRFGFRDVDPITGSFMNSTGGGRRREGATTPLRNALDGGNYFRNLFSVLLDRDVGSEEFDTWLSGVSEPPALTLRDLEKWLNKTRANVVVWSHRGSGDHVLGPIDKKTDLRPRALHVGVREGHVYRLELDGPWRDRFGSSLDVAIEHSVKTQRRFRRIAEAVEEKDKPDTTDCGSKK---TFLCVADIVSDL---------------MAINQSEEENGHQQAARKKRKRGKRRSEF----NTWYAPPGTVLDELMLHLHLVGVSCRGRLTSYSHWDSLSLPAHGITIRTWCSAS----------MGGLDPDELEPDQATRLIELHNELGLKFYHGVLDFRVSSQYSQSLLALLEVCWRGPIVGAEEVSGTSYGPEDWQCDINGAHTAALMSMEVVPVFGHVDEVEEYDDHGIEDWTLYIIELDAFGKPDVFFNADVTPVFGRNYKRYLDLVDTAARHRVTHFVRPSRIVSMCHIPKLVRDLLAHEPGDPFLQDADCARKFKKGIFVRASGMLQQRYADRIDAVMVTGCDEASAVGGKIVPVLGEVDRVKAELRTGQGKLGIESLRTGDAYLCLDAERTWYRDGFWALGALILDETRLRVLEARNALESCGACDFSYQCDAVFFRGSSSV 828          
BLAST of mRNA_H-paniculata_contig5114.12415.1 vs. uniprot
Match: A0A6H5KMS8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMS8_9PHAE)

HSP 1 Score: 518 bits (1333), Expect = 8.640e-167
Identity = 326/742 (43.94%), Postives = 398/742 (53.64%), Query Frame = 1
Query:    1 VERVDQAAPLP-RSNGWRYMRSHGVTYRCQAVFSTGFKIRIA-TSSYGSGHRWFNSNPLGGDPSLENFQSWANRVW*RGMIHPGDAEAWKTAFVHIEGGGHGQLVVSAADGTWRAILCWASAGRKIDVDHEGTRASVANLKVHVGIDSPSPHFRQLNRASFGHSLVRYKSLTVFGMAWKEQFLDFCPAVLVAYAWRDCHVGLL--TQERRRFGFRDVDPLAGVFIIFTIGRRPKKGITHVTPNALDGGNYFHKLFSILLERDVGPTEFDAWLSGEQLTPALKLQHLEKWLHMTKASVAVWSRRCSGVEVLGPVDKKASLRSPTLHIGVREGHVYRLVLDGPWGDR-----------------RFRRIAEAAPLRR-------GTKKRQQTGAAEPSLVSPTP*ARS*TRSSQSGTNIPLGSAREESTTRPTTRLRTGLRVRLSKN*CSTSTSATSHAGATGTP*PYQHMISLSEHGAAQAWADWIRISSNATRLLA*SSCKTPSA-------ESSTAGSWISGRE*VQPVPPGAARGVLE---------------EADRRG-----RRRIGISYG*EDWQCDIHGAHTAVLISMYTVPAFGYTDDVEEFDDHEIEDWTLYANKVDAV------------------------------------------------------------MVTVWYRDGFWALGALIMDETRLRVLEVRNVLETCGGSTFSYQCDALFFQGSQPV 1881
            VE+VDQ AP+  RSNGWR                    +RI+  SS G G+RWFNS+PLGGDP+L NFQ+WA  V   GM+HP DAEAW+TAFV +EGGG GQLVVSAAD +WR ILCWASAGR+I+VD  G   S+ +L+V  GIDS SP FRQLN A+FGH +VRY  +T FG  W++Q    C AVLVA  WRD  V LL  T+ERRRFGFRDVDP  G F+I + G RPKKG      NALDGGNYF  L+SILLERD+G  EFD W+SG+   PAL L HLEKWLHMT ASV VWS R +G  +LGP D K +L+ PTLH+GVREGHVYRLVL+GPWGDR                 +FRRI+E     +       GTK    T +    +VS                 + +     +   +P  + + G +V  SK   +   +A            + H+  +S  G    ++ W  +S  A  ++  + C            E   A   I   E    +     RGVL+               E   RG         G SYG EDWQCDI+GAHTA L++M TVP FG+ D+VEEFD H IEDWTLY  K+DA+                                                            +   WYRDGFWALGALI+DETRLRVLE RN LE CG S FS+QCDA+FF+GS  V
Sbjct:   22 VEQVDQVAPVVGRSNGWR--------------------VRISFPSSPGPGYRWFNSHPLGGDPNLYNFQTWARTVLQGGMVHPRDAEAWRTAFVEVEGGGLGQLVVSAADESWRVILCWASAGRRIEVD-TGIPISLVSLQVRSGIDSQSPFFRQLNIATFGHRVVRYAPITAFGKKWQKQLPGACLAVLVADVWRDSQVYLLKKTKERRRFGFRDVDP-TGAFMISSRGGRPKKGAPVHNKNALDGGNYFRNLYSILLERDIGEVEFDTWVSGDAEPPALTLLHLEKWLHMTNASVVVWSHRGTGANILGPSDGKTNLQPPTLHVGVREGHVYRLVLEGPWGDRFGSSLDVAIDHSVRTYRKFRRISEMTVEEQEPDTTGFGTK----TFSCVADIVSDI---------------MAINQTGGDHNRQPVEKRKHGRKVAESKTWYAPPGTALDELML------HLHLAGVSCKGKLTNYSRWDSLSLPAHGVVIRTWCSASMGGLDPDDFEPDQATRLI---ELHNALGLKFHRGVLDFRVSSQYSQSLLALLEVCWRGPIVGAEDASGSSYGREDWQCDINGAHTAALMNMETVPVFGHMDEVEEFDGHNIEDWTLYTIKLDALGEPDVFLDADVMPVFGRNYKRYLDLIDNAPRHRVTHFVRPSRTVSRCHIPKLVRDLLAHELERTWYRDGFWALGALILDETRLRVLEARNALELCGASDFSFQCDAVFFRGSSSV 713          
BLAST of mRNA_H-paniculata_contig5114.12415.1 vs. uniprot
Match: D8LFQ2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFQ2_ECTSI)

HSP 1 Score: 518 bits (1334), Expect = 2.380e-160
Identity = 335/837 (40.02%), Postives = 409/837 (48.86%), Query Frame = 1
Query:    1 VERVDQAAPLP-RSNGWRYMRSH-GVTYRCQAVFSTGFKIRIATSSY--GSGHRWFNSNPLGGDPSLENFQSWANRVW*RGMIHPGDAEAWKTAFVHIEGGGHGQLVVSAADGTWRAILCWASAGRKIDVDHEGTRASVANLKVHVGIDSPSPHFRQLNRASFGHSLVRYKSLTVFGMAWKEQFLDFCPAVLVAYAWRDCHVGLLTQERRRFGFRDVDPLAGVFIIFTIGRRPKKGITHVTPNALDGGNYFHKLFSILLERDVGPTEFDAWLSGEQLTPALKLQHLEKWLHMTKASVAVWSRRCSGVEVLGPVDKKASLRSPTLHIGVREGHVYRLVLDGPWGDR-------------------------RFRRIAEAAPLRRGTKKRQQTGAAEPSLVSPTP*ARS*TRSSQSGTNIPLGSAREESTTRPTTRLRTG------------LRVRLSKN*CSTSTSATSHAGATGTP*PYQHMISLSEHGAAQAWADWIRISSN-ATRLLA*-----------------SSCKTPSAESSTAGSWISGRE*VQPVPPGAARGVLEEADRRGRRRIGISYG*EDWQCDIHGAHTAVLISMYTVPAFGYTDDVEEFDDHEIEDWTLY--------------------------------------------------------------------------------------------------ANKVDAVMVT-----------------------------------------------------VWYRDGFWALGALIMDETRLRVLEVRNVLETCGGSTFSYQCDALFFQGSQPV 1881
             E+VDQAAPLP RSNGWRY+    G TYR QAVF  GF++R+       G GHRWFNS+PLGGDP L +FQ+WA  +  R ++H  DA+AW+ AFV +EGGGHGQLVVSAAD TWR ILCW S GR+IDV+  G   S+ +L+V  G+ S  P FRQLN ASFGH LVRY  LT FG+ WKE+    C AVLVA +WRDC VGLL ++RRRFGFRDVDPL G F+    G R KKG+    PNALDGGNYF  L+SI+LERDVG TEF AWLSGE+  PA+ ++HL+KWL  TKASV VWS R SG EV+G   +  SLR   LH+GVREGHVYRLVLDGPW DR                          FRRIAEAA    G +K      A       T    +   SSQ+ T+      R   T       +T             L + L    C+   ++ SH  +   P     +I  +  GA+    D   +  + ATRL+                   SS  +PS  +     W               RG +  A+       G +YG  DWQCDI+GAHTA ++SM  +PAF + D+V+ FD H+IEDWTLY                                                                                                  A++++AVMVT                                                     VWYRDGFWALG LI+DETRLRVLEVRN+LE CGGS FSYQCDA+FF+G   V
Sbjct:   28 AEQVDQAAPLPDRSNGWRYLGPREGETYRRQAVFGAGFRLRLPFPRLCPGPGHRWFNSHPLGGDPDLPDFQAWARTMLRRRLVHRDDADAWRAAFVDVEGGGHGQLVVSAADETWRVILCWGSRGRRIDVNQHGIPTSLVDLQVRAGVISEDPRFRQLNIASFGHRLVRYDPLTEFGVIWKERLPGACLAVLVADSWRDCQVGLLARDRRRFGFRDVDPLTGAFMDSRAGGRSKKGVKRAPPNALDGGNYFRNLYSIMLERDVGSTEFSAWLSGEECVPAVTVRHLDKWLKTTKASVVVWSHRGSGAEVVGAKGQTTSLRPRALHVGVREGHVYRLVLDGPWKDRFTGAREGAVGPSLHVAVEHCVRTRRLFRRIAEAAEEGEGEEKSDGDTRAFGRCADMT---EAILTSSQTDTDQQTARKRRRGTDDKADSKKTWYAPPGTALDELMLHLHLGGVACAGRLTSYSHWDSLSLP--AHGIIIRTWCGASMGGLDPDSLECDEATRLIELHGTLGRKLIRGVMDFRVSSEYSPSLLALLEVCW---------------RGPIVGAEDAS----GTTYGPGDWQCDINGAHTAAMLSMENLPAFTHMDEVQVFDGHDIEDWTLYVVRLEAVGDPDVFLNADVTPVFGRNYKRYLALIKTPAPHRVSHFVRPARTIQKCHIPRLVQDLLARDLGEPLLQDPDAARRFKKGLFVRTSGLLQQRHADRINAVMVTTSKEAMAVGGKIVPVLGEVNRIKSELRKNGTDGGLGIEKLDSGDAYLCFEASRVWYRDGFWALGTLILDETRLRVLEVRNMLEACGGSAFSYQCDAVFFRGPPEV 840          
BLAST of mRNA_H-paniculata_contig5114.12415.1 vs. uniprot
Match: A0A6H5JCS9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCS9_9PHAE)

HSP 1 Score: 491 bits (1264), Expect = 5.420e-148
Identity = 294/614 (47.88%), Postives = 357/614 (58.14%), Query Frame = 1
Query:    1 VERVDQAAPLP-RSNGWRYMRSHGVTYRCQAVFSTGFKIRIA-TSSYGSGHRWFNSNPLGGDPSLENFQSWANRVW*RGMIHPGDAEAWKTAFVHIEGGGHGQLVVSAADGTWRAILCWASAGRKIDVDHEGTRASVANLKVHVGIDSPSPHFRQLNRASFGHSLVRYKSLTVFGMAWKEQFLDFCPAVLVAYAWRDCHVGLLTQERRRFGFRDVDPLAGVFIIFTIGRRPKKGITHVTPNALDGGNYFHKLFSILLERDVGPTEFDAWLSGEQLTPALKLQHLEKWLHMTKASVAVWSRRCSGVEVLGPVDKKASLRSPTLHIGVREGHVYRLVLDGPWGDR-----------------RFRRIAEAAPLRR-------GTKKR-------------QQTGAAEPSLVSPTP*ARS*TRSSQSGTNIPLGSAREESTTRPTTRLRTGLRVRLSKN*CSTSTSATSHAGATGTP*PYQHMISLSEHGAAQAWADWIRISSN-ATRLLA*SSCKTPSAESSTAGSWISGR--E*VQPVPPGAARGVLEEADRRGRRRIGISYG*EDWQCDIHGAHTAVLISMYTVPAFGYTDDVEEFDDHEIEDWTLYANKVDAV 1716
            VE+VDQA PL  RSNGWRY    GVTYR QAVF TG++IRI+  SS G GH WFNS+P+GGDP+L +FQ+WA  V  RGM+HP DAEAW+TAFV +EGGG GQLVVS+AD TWR ILCWASAGR+IDVD +G   S+ +L+V  G+DS SP FRQLN A+FGH +VRY  +T FG  W+EQ    C AVLVA  WRD  V LL +ER+RFGFRDVDP  G F     G RPKKG      NALDGGNYF  L+SILLERD+G TEFD W+SG+   PAL L+HLEKWL MTKA V VWS R +G  +LGP + K SLR PTLH+GVREGHVYRLVL+G W DR                 +FRRI+E             GTK               +QTG                  S       P G+A +E            L + L     S     T+++       P Q +I  +   A+    D      + ATRL+   S              +S +  + +  +     RG +  A+       G  YG EDWQCDI+GAHTA L++M TVP FG+ D+VEEFD H IEDWTLY  K+DA+
Sbjct:   22 VEQVDQAEPLANRSNGWRYRGPRGVTYRRQAVFGTGYRIRISFPSSAGPGHTWFNSHPVGGDPNLYSFQTWARMVLERGMVHPRDAEAWRTAFVDVEGGGQGQLVVSSADETWRVILCWASAGRRIDVDSQGIPFSLLSLQVRSGVDSQSPLFRQLNIATFGHRVVRYTPMTAFGKKWQEQLPGACLAVLVADTWRDSQVDLLARERKRFGFRDVDP-TGAFTSSCGGGRPKKGAPAQNKNALDGGNYFRNLYSILLERDIGETEFDKWVSGDTEPPALTLRHLEKWLSMTKAGVVVWSHRGTGANILGPSEGKTSLRPPTLHVGVREGHVYRLVLEGRWRDRFGSSLDVAVEHRVRTYRKFRRISEMTEEEEEPDVTGIGTKTFSCVADIVSDIMAIKQTGGGHNRQAVEKKRKHGRKVSECKTWYAPPGTALDE------------LMLHLHLAGVSCKGKLTNYSRWDSLSLPAQGIIIRTWCSASMGRLDPDDFEPDQATRLIELHSALGLKFYRGVLDFRVSSQYSQSLLALLGVCWRGPIVGAEDAS----GSCYGREDWQCDINGAHTAALMNMETVPVFGHMDEVEEFDGHNIEDWTLYIIKLDAL 618          
BLAST of mRNA_H-paniculata_contig5114.12415.1 vs. uniprot
Match: A0A6H5KBM1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBM1_9PHAE)

HSP 1 Score: 466 bits (1198), Expect = 7.120e-144
Identity = 313/716 (43.72%), Postives = 383/716 (53.49%), Query Frame = 3
Query: 1047 RSTEEGHQEETTDGGSRTFTRFADPLSEILNTKQSERDQHTTRKRKRGVNNKTDYKTS-YGPPGTALEELMLHLHLGDVSCRG------HWDSLTLPAHDITIRTWCGASMGGLDPDQLECDQATRLIELQNAFGRKLYRGVMDF-----------------GSRVSTAR-------------------------------------------------------------PSWRCSRCVGRG-------RSSGKKTHRDI---------LWI---GRLAVRHPRGSHS---SVDKHVHGARVRLHR*CGGVR*PRNRGLDPVRQQGRCCHGDCVVQRRLLG----AWGADYGRNPTTCVGGTERSRNLWGVHLQLPMRRLVLPGISAS---RFGHLFSRELKSPGTLKFESTLKNLLFSERRVFGGIQAT------------------KRKAWPEICRAELLATLERLGCGLMS*EGGVACAVTEEHGRSGKSCCAFRAAKSVYKTGIALIPVNNLHTSFTDLPSG-CIRTADHQLGFYIGADSHVKNTAGFIYIPRVDVVIVEETAYTPIRVLSMILMATHSVGAHVIGTYDTYQRQLVRESSGMSISTDNVDRKVILERAFPTCLHLFARKRDNTIEEQVEKDDGLLYILAADQDNAEA*TGALERFGGRCPTR-SPNVFDFHLAYTRDCARFHAFRGLSIYNEGGEWMPSGK 2792
            R  + G  EE +DG +RTF R AD    IL++ Q E DQ T RKR+RG ++K D K + Y PPGTAL+ELMLHLHLG V+C G      HWDSL+LP HDI IRTWCGA MGGLDPD LECD+ATRLIEL    GRKL RGVMDF                 GS  STAR                                                             P+    +C   G       R  G+   RD+         L++   G L  RH    ++   +  +       ++    G V    NR    +R+ G    G+  +++   G    ++ A   RN     GG+  S     V L+       LP + A    R+ H FS ELK+PGTLKFE  LKN   S+R VF GI+                    KRK WP+IC AE  A+LE+L   LMS E  V CAVT +HG +GKS C   AAK+V++T + L P N+L TS TDLP G  ++TADHQLGFYIG D+ V+ T G I+IPRVDVV +EE AY  +  LSMIL A HS G HVIGTY+T+Q Q  RE SG+SIS DNVDR+V+LER+FP C HLFARKR  TI+EQVE DD LLYIL A  ++A+A   ALERFG   P    P+V DFHLAYTRDC RFHA RGL+  NE G W   G+
Sbjct:  156 RRPKRGKGEEKSDGDTRTFGRCADMAEAILSSSQMETDQQTARKRRRGTDDKADSKKNWYAPPGTALDELMLHLHLGGVTCTGKLTSYSHWDSLSLPVHDIIIRTWCGARMGGLDPDVLECDEATRLIELHGTLGRKLIRGVMDFRVSSEYSPSLLVLLEGTGSATSTARNGTHTVAMLSMDDLPAYTHTDEVQAFDGHDIEDRTLYVVRLEAGGDPDVILNADRVTHFVRPARTVQKCHIPGLVHDLLARDLGESLLRDVDAARRFEKGLFVRTSGLLQQRHADRINAVMVTTSEEAMAVGGKIVPILGEV----NRIKSELRKNGT--DGELGIEKLDSGDAYLSFEASRVRNMLEACGGSAFSYQCDAVFLR------GLPEVQAEARHRYEHFFSGELKTPGTLKFEPALKNAASSDR-VFAGIEENLGTMGAAHVAWRSVGKDDKRKMWPDICSAESPASLEQLLRELMSQEDRVVCAVTGKHGGAGKSYCTLHAAKAVFETDLVLTPTNSLRTSHTDLPPGWSVKTADHQLGFYIGDDTRVRKTVGSIHIPRVDVVKIEEAAYMSLHALSMILAAAHSKGVHVIGTYETHQLQPAREGSGLSISVDNVDRQVVLERSFPICFHLFARKRVRTIDEQVEVDDSLLYILDAANNSAKAQIRALERFGEIGPAGCDPHVSDFHLAYTRDCPRFHAVRGLTRCNEAGGWDALGQ 858          
BLAST of mRNA_H-paniculata_contig5114.12415.1 vs. uniprot
Match: A0A6H5J754_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J754_9PHAE)

HSP 1 Score: 469 bits (1207), Expect = 1.290e-143
Identity = 311/769 (40.44%), Postives = 372/769 (48.37%), Query Frame = 1
Query:    1 VERVDQAAPLP-RSNGWRYMRSHGVTYRCQAVFSTGFKIRIA-TSSYGSGHRWFNSNPLGGDPSLENFQSWANRVW*RGMIHPGDAEAWKTAFVHIEGGGHGQLVVSAADGTWRAILCWASAGRKIDVDHEGTRASVANLKVHVGIDSPSPHFRQLNRASFGHSLVRYKSLTVFGMAWKEQFLDFCPAVLVAYAWRDCHVGLL-TQERRRFGFRDVDPLAGVFIIFTIGRRPKKGITHVTPNALDGGNYFHKLFSILLERDVGPTEFDAWLSGEQLTPALKLQHLEKWLHMTKASVAVWSRRCSGVEVLGPVDKKASLRSPTLHIGVREGHVYRLVLDGPWGDRRFRRIAEAAPLRRGTKKRQQTGAAEPSLVSPTP*ARS*TRSSQSG---TNIPLGSAREESTTRPTTRLRTGLRVRLSKN*CSTSTSATSHAGATGTP*PYQHMISLSEHGAAQAWADWIRISSNATRLLA*SSCKTPSAESSTAGSWIS----GRE*VQPVPPGAAR--------------GVLE---------------EADRRG-----RRRIGISYG*EDWQCDIHGAHTAVLISMYTVPAFGYTDDVEEFDDHEIEDWTLYANKVDAVMV--------------------------------------------------------------------------------------------------TVWYRDGFWALGALIMDETRLRVLEVRNVLETCGGSTFSYQCDALFFQGSQPV 1881
            VE+VDQA PL  RSNGWRYM   GVTYR QAVF TGF+IRI+  SS G GHRWFNS+PLGGDP+L NFQ+WA  V  RGM                       LVVSAAD TWR ILCWASAGR+IDVD +G   S+ NL+V  G+DS SP FRQLN A+FGH +VRY  +T FG  W+EQ    C AVLVA AWRD  V LL  +ERRRFGFRD  P+                      NALDGGNYF  L+SILLERD+G  EFD W+SG+   PAL L HLEKWLHMTKASV VWS R +G  +LGP D K +LR PT+H+GVREGHVYRLVL+GPW DR       +  +    ++   TG    +               Q+G   +  P+   R+            G +V   K   +   +A            + H+  +S  G    ++ W  +S  A  L+                +W S    G +     P  A R              GVL+               E   RG         G SYG EDWQCDI+GAHTA L++M TVP FG+ D+VEEFD H IEDWTLY  K+DA++                                                                                                     WYRDGFWAL  L +DETRLRVLE RN LE+CG S FSYQCDA+FF+GS  V
Sbjct:   23 VEQVDQAEPLAGRSNGWRYMGPGGVTYRRQAVFGTGFRIRISFPSSPGPGHRWFNSHPLGGDPNLYNFQTWARTVLQRGM-----------------------LVVSAADDTWRVILCWASAGRRIDVDTQGIPISLVNLQVRSGVDSQSPFFRQLNIATFGHRVVRYAPITAFGKKWQEQLPGACLAVLVADAWRDSQVDLLKARERRRFGFRDGAPVQN-------------------KNALDGGNYFRNLYSILLERDIGEVEFDKWVSGDTEPPALTLLHLEKWLHMTKASVVVWSHRGTGANILGPPDGKTNLRPPTVHVGVREGHVYRLVLEGPWRDR----FGSSLDVAIEHREPDPTGFGAKTFSCVADIVSDIMAIKQTGGDHSRQPVEKKRKH-----------GRKVSECKTWYAPPGTALDELML------HLHLAGVSCKGKLTNYSRWDSLSLPAHGLII--------------RTWFSASMGGLDPDDFEPDQATRLIELHNALGLKFCRGVLDFRVSSQYSKSLLALLEVCWRGPIVGAEDASGSSYGREDWQCDINGAHTAALMNMETVPVFGHMDEVEEFDGHNIEDWTLYIIKLDALVTHYVGPSRTVSRCHIPKLMKDLLTHELGDPLLEDADYARRVKKRNIRAGQCDEASAVGGKIVPVLCEVDRVKAELRTGQGDLGIDSLRTGNAYLCFDAERTWYRDGFWALRTLTLDETRLRVLEARNALESCGASDFSYQCDAVFFRGSSSV 714          
BLAST of mRNA_H-paniculata_contig5114.12415.1 vs. uniprot
Match: A0A6H5KTC4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTC4_9PHAE)

HSP 1 Score: 465 bits (1197), Expect = 1.240e-142
Identity = 307/800 (38.38%), Postives = 386/800 (48.25%), Query Frame = 1
Query:    1 VERVDQAAPLP-RSNGWRYMRSH-GVTYRCQAVFSTGFKIRIATSSY--GSGHRWFNSNPLGGDPSLENFQSWANRVW*RGMIHPGDAEAWKTAFVHIEGGGHGQLVVSAADGTWRAILCWASAGRKIDVDHEGTRASVANLKVHVGIDSPSPHFRQLNRASFGHSLVRYKSLTVFGMAWKEQFLDFCPAVLVAYAWRDCHVGLLTQERRRFGFRDVDPLAGVFIIFTIGRRPKKGITHVTPNALDGGNYFHKLFSILLERDVGPTEFDAWLSGEQLTPALKLQHLEKWLHMTKASVAVWSRRCSGVEVLGPVDKKASLRSPTLHIGVREGHVYRLVLDGPWGDR-------------------------RFRRIAEAAPLRRGTKKRQQTGAAEPSLVSPTP*ARS*TRSSQSGTNIPLGSAREESTTRPTTRLRTGLRVRLSKN*CSTSTSATSHAGATGTP*PYQHMISLSEHGAAQAWADWIRISSN-ATRLLA*SSCKTPSAESSTAGSWISGRE*VQPVPPGAA------RGVLEEADRRGRRRIGISYG*EDWQCDIHGAHTAVLISMYTVPAFGYTDDVEEFDDHEIEDWTL------------------------------------------------------------------------------------YANKVDAVMVT-----------------------------------------------------VWYRDGFWALGALIMDETRLRVLEVRNVLETCGGSTFSYQCDALFFQGSQPV 1881
            VE+VD+A P+  RSNGWRY+    G TYR QAVF  GF++ +       G GHRWFNS+PLGGDP L +FQ+WA  +  R ++HP DA+AW+ AFV +EG GHGQLVVSAAD TWR ILCW S GR+IDV+      S+ +L+V  G+ S  P FRQLN A FGH LVR+  +T FG+ W E+      AVLVA +WRDC + LL +++RRF F   D L+GV                  PNALDGGNYF  L+S +LERDVG TEF AWL GE+ TPA+ ++HLEKWL  TKASV VWS R SG EV GP D+  SLR   LH+GVREGHVYRLVLDGPW DR                          FRR+AEAA    G +K              T                 L + + E+  + T + R G+  +      S  T  TS++       P   +I  +  GA+    D   +  + ATRL+        +      G  +  R   +  P   A      RG +  A+      +G +YG  DWQCDI+GAHTA + SM  +PAF + DD + FD H+IEDWTL                                                                                    +A++++AVMVT                                                     VWYRDGFWALG LI+DETRLRVLEVRN+LE CGGS FSYQCDA+FF+G   V
Sbjct:   26 VEQVDEAVPMSTRSNGWRYLGPREGETYRRQAVFGAGFRLHLPFPRLPPGPGHRWFNSHPLGGDPDLPDFQAWARTMLRRRLVHPRDADAWRAAFVDVEGSGHGQLVVSAADETWRVILCWGSRGRRIDVNQHSIPTSLVDLQVRAGVTSEDPRFRQLNIACFGHRLVRHDPVTEFGVTWTERSPGAYLAVLVADSWRDCQIDLLERDQRRFAF---DLLSGV--------------KRAAPNALDGGNYFCNLYSKILERDVGLTEFSAWLLGEECTPAVTVRHLEKWLKTTKASVVVWSHRGSGAEVRGPKDQPTSLRPRALHVGVREGHVYRLVLDGPWKDRFTSAREGAVGPSLDVAVEHCARTRRLFRRVAEAAEEGEGEEKSDGDTRTFGRCADMT--------------QAILATGQTETDQQTTRKRRRGVDDKAD----SKETWLTSYSHRDSLSLPAHGIIVRTWRGASMDGLDPDSLECDEATRLIE----LHGTLGRKLIGGVMDFRVSSEYSPSLLALLEVCWRGPIAGAEDA----LGTTYGPGDWQCDINGAHTAAMPSMENLPAFTHMDDGQAFDGHDIEDWTLCVVRLEAGGDPDVFRYLALIQTPALNRVTHFVRPARTDRKCHIPELVQDVLARDLGEPLLQDLDAARRFKKGLLVRTSGLLQRRHAHRINAVMVTTSDEAMAVGGKIVPVLGEVNRIKSELRKNGTDGELGIEKLDSGDAYLSFEASRVWYRDGFWALGTLILDETRLRVLEVRNMLEACGGSAFSYQCDAVFFRGPPEV 782          
BLAST of mRNA_H-paniculata_contig5114.12415.1 vs. uniprot
Match: D7G6J5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6J5_ECTSI)

HSP 1 Score: 440 bits (1131), Expect = 1.860e-136
Identity = 291/633 (45.97%), Postives = 361/633 (57.03%), Query Frame = 3
Query: 1050 STEEGHQEETTDGGSRTFTRFADPLSEILNTKQSERDQHTTR------KRKRGVNNKTDYKTSYGPPGTALEELMLHLHLGDVSCRG------HWDSLTLPAHDITIRTWCGASMGGLDPDQLECDQATRLIELQNAFGRKLYRGVMDFG-------SRVSTARPSWRCSRCVGRGRSSGKKTHRDILWIGRLAVRHPRGSHSSVDKHVHGARVRLHR*CGGVR*PRNRGLDPVRQQGRCCHGDCVVQRRLLGAW-------GAD----YGRNPTTCVGGTERSRNLWGVHLQLPMR---RLVLPGISASRFGHLFSRELKSPGTLKFESTLKNLLFSERRVFGGIQATKRKAWPEICRAELLATLERLGCGLMS*EGG-VACAVTEEHGRSGKSCCAFRAAKSVYKTGIALIPVNNLHTSFTDLPSG-CIRTADHQLGFYIGADSHVKNTAGFIYIPRVDVVIVEETAYTPIRVLSMILMATHSVGAHVIGTYDTYQRQLVRESSGMSISTDNVDRKVILERAFPTCLHLFARKRDNTIEEQVEKDDGLLYILAADQDNAEA*TGALERFGGRCPT-RSPNVFDFHLAYTRDCARFHAFRGLSIYNEGGEWMPSGK*RWWVYIIGTMESRAG 2840
            +TEE  + + T  G++TF+  AD +S+IL   Q+E             KR++     ++ KT Y PPGTAL+ELMLHLHL  VSC G      HWDSL+LPAH ITIRTWC ASMGGLDPD+ E DQATRLIEL NA G K YRGV+DF        S ++     WR    VG    SG    R+  W   +      G+H++   ++    V  H             +D V +       D  +    L A         AD    +GRN    +   + +      H   P R   R  +P +    +G +      S G         N   S  +      +TKR  WPEIC AE  + LE L  GL+S +G  V CAVT EHG +GKS CAFRAAK ++KTG+ + P N+L TSFTD+PSG  ++TADHQLGFY+G DS ++ TAG I   +VDV+I+EE AY P+R LSMIL A    G HVIGTYDT+Q Q V ESSGMSIS+DNVDRKVILE+AFPTC H+FARKRD T EEQVE DDGLLYILAA  ++ EA T A+ERFG  CPT   P+  +FHLAYTRDCARFHAFRGL   +E G W   G+      +IG      G
Sbjct:  202 TTEEEEEPDRTGCGTKTFSCVADIVSDILANNQTEXXXXXXXXXXXXXKREKA----SEPKTWYAPPGTALDELMLHLHLVGVSCSGRLSNYSHWDSLSLPAHGITIRTWCSASMGGLDPDEFEPDQATRLIELHNALGLKFYRGVLDFRVSSQYSQSLLALLEVCWR-GPIVGAEDVSGSSYGRED-WQCDI-----NGAHTAALMNMETVPVFGH-------------MDEVEEFDGHDIEDWTLYIINLDALDEPDVFLNADVTPVFGRNYKRYLDLIDTAPRHRVTHFVRPSRTVGRCHIPTLVIPLWGGV-GAGFSSMGDAH------NAWCSLEK------STKRNLWPEICEAESPSKLESLLRGLLSQQGSRVVCAVTGEHGGAGKSYCAFRAAKKIFKTGLVVTPTNSLRTSFTDMPSGWSVKTADHQLGFYLGNDSEMRKTAGSIRTLKVDVIIIEEAAYMPLRTLSMILAAARCSGTHVIGTYDTHQLQPVCESSGMSISSDNVDRKVILEKAFPTCFHVFARKRDKTTEEQVEMDDGLLYILAAGNNSQEAQTRAIERFGRECPTGNDPSPSEFHLAYTRDCARFHAFRGLLGCDEAGGWDGLGR----TTVIGAQHRDLG 793          
BLAST of mRNA_H-paniculata_contig5114.12415.1 vs. uniprot
Match: A0A6H5JTS3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTS3_9PHAE)

HSP 1 Score: 444 bits (1141), Expect = 2.220e-132
Identity = 270/591 (45.69%), Postives = 327/591 (55.33%), Query Frame = 1
Query:   76 YRCQAVFSTGFKIRIATSSYGSGHRWFNSNPLGGDPSLENFQSWANRVW*RGMIHPGDAEAWKTAFVHIEGGGHGQLVVSAADGTWRAILCWASAGRKIDVDHEGTRASVANLKVHVGIDSPSPHFRQLNRASFGHSLVRYKSLTVFGMAWKEQFLDFCPAVLVAYAWRDCHVGLLTQERRRFGFRDVDPLAGVFIIFTIGRRPKKGITHVTPNALDGGNYFHKLFSILLERDVGPTEFDAWLSGEQLTPALKLQHLEKWLHMTKASVAVWSRRCSGVEVLGPVDKKASLRSPTLHIGVREGHVYRLVLDGPWGDR-----------------RFRRIAEAAPLRR-------GTKKR-------QQTGAAEPSLVSPTP*ARS*TRSSQSGTN------IPLGSAREESTTRPTTRLRTGLRVRLSKN*CSTSTSATSHAGATGTP*PYQHMISLSE-------HGAAQAWADWIRISSNATRLLA*SSCKTPSAESSTAGSWISGRE*VQPVPPGAARGVLEEADRRGRRRIGISYG*EDWQCDIHGAHTAVLISMYTVPAFGYTDDVEEFDDHEIEDWTLYANKVDAV 1716
            YR QAVF  G+++RI+ S  G  +RWFNS+P GGDPSLENFQSWA R W R ++HP DA+AWKTAF+ +EGGG GQLVVSAAD TWRAILCW SAGR+I++DHEG  AS++NL              QLN ASFGH +VRY+ LT FGM WK++    C AVLVA AWRDC + LL +ERRRFGFRDV+P+ G FI  T G R K G T    NA DGGNYF  LF +LL RDVG  EF  WL+G    PA KL+ LEKWL  TKA+V VWS R SG  VLGP+DKK  LR   LH+GVREG VYRL LDGPW +R                 RFRR AEA   +        G+K             A   S V   P   +  +  +  T+       P G+A EE            L + L    C    S+ SH  +   P     +I L         HG         R+SS  ++ L           +     W               RG +  A+       G SYG EDWQCDI+GAHTA L+SM  VP FG+ D+VEE+ DH+IEDWTLY  ++DA+
Sbjct:    2 YRRQAVFGAGYRVRISVSRRGPEYRWFNSHPAGGDPSLENFQSWATRTWRRDLVHPRDADAWKTAFIDVEGGGRGQLVVSAADDTWRAILCWGSAGRRIEIDHEGIPASLSNL--------------QLNIASFGHRVVRYEPLTTFGMTWKKRLPGACLAVLVADAWRDCQLDLLIRERRRFGFRDVNPITGSFINSTGGGRQKGGATTPLRNASDGGNYFQNLFPVLLGRDVGSEEFGMWLAGVSEPPARKLRDLEKWLIKTKANVVVWSYRGSGDHVLGPIDKKTDLRPRGLHVGVREGDVYRLELDGPWCNRFGSSLDVAIEHSVRTQRRFRRTAEAIEEKEEPDTTECGSKAFTCVTDIVSDLMAINKSEVEDGPQQAARKKRKRGKTSEFNMWYAPPGTALEELM----------LHLHLVGVSCRGRLSSYSHWDSLSVPAHVTRLIELHNELGLQFSHGVLD-----FRVSSQYSQSLL----------ALLKVCW---------------RGPIVGAEEVS----GTSYGPEDWQCDINGAHTAALMSMAVVPVFGHVDEVEEYHDHDIEDWTLYKIELDAL 534          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5114.12415.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQN9_ECTSI8.920e-18550.30Uncharacterized protein n=4 Tax=Ectocarpus TaxID=2... [more]
A0A6H5KSM3_9PHAE1.600e-17541.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KMS8_9PHAE8.640e-16743.94Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LFQ2_ECTSI2.380e-16040.02Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5JCS9_9PHAE5.420e-14847.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KBM1_9PHAE7.120e-14443.72Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5J754_9PHAE1.290e-14340.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KTC4_9PHAE1.240e-14238.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G6J5_ECTSI1.860e-13645.97Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JTS3_9PHAE2.220e-13245.69Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5114contigH-paniculata_contig5114:4821..8201 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score359.0
Seed ortholog evalue2.1e-96
Seed eggNOG ortholog2880.D8LFQ2
Hectar predicted targeting categoryother localisation
EggNOG OGs2E3IK@1,2SAKM@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons5
Model size2899
Cds size894
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930499.4844089-UTR-H-paniculata_contig5114:4820..50511622930499.4844089-UTR-H-paniculata_contig5114:4820..5051Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5114 4821..5051 +
1691481320.154051-UTR-H-paniculata_contig5114:4820..50511691481320.154051-UTR-H-paniculata_contig5114:4820..5051Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5114 4821..5051 +
1622930499.516948-UTR-H-paniculata_contig5114:5945..61111622930499.516948-UTR-H-paniculata_contig5114:5945..6111Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5114 5946..6111 +
1691481320.1797886-UTR-H-paniculata_contig5114:5945..61111691481320.1797886-UTR-H-paniculata_contig5114:5945..6111Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5114 5946..6111 +
1622930499.5336008-UTR-H-paniculata_contig5114:6128..65281622930499.5336008-UTR-H-paniculata_contig5114:6128..6528Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5114 6129..6528 +
1691481320.1886663-UTR-H-paniculata_contig5114:6128..65281691481320.1886663-UTR-H-paniculata_contig5114:6128..6528Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5114 6129..6528 +
1622930499.548846-UTR-H-paniculata_contig5114:6819..68541622930499.548846-UTR-H-paniculata_contig5114:6819..6854Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5114 6820..6854 +
1691481320.1986184-UTR-H-paniculata_contig5114:6819..68541691481320.1986184-UTR-H-paniculata_contig5114:6819..6854Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5114 6820..6854 +
1622930499.5621493-UTR-H-paniculata_contig5114:7007..72721622930499.5621493-UTR-H-paniculata_contig5114:7007..7272Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5114 7008..7272 +
1691481320.2109973-UTR-H-paniculata_contig5114:7007..72721691481320.2109973-UTR-H-paniculata_contig5114:7007..7272Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5114 7008..7272 +
1622930499.5740924-UTR-H-paniculata_contig5114:7293..82011622930499.5740924-UTR-H-paniculata_contig5114:7293..8201Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5114 7294..8201 +
1691481320.2329426-UTR-H-paniculata_contig5114:7293..82011691481320.2329426-UTR-H-paniculata_contig5114:7293..8201Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5114 7294..8201 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930499.499229-CDS-H-paniculata_contig5114:5051..59451622930499.499229-CDS-H-paniculata_contig5114:5051..5945Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5114 5052..5945 +
1691481320.1699657-CDS-H-paniculata_contig5114:5051..59451691481320.1699657-CDS-H-paniculata_contig5114:5051..5945Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5114 5052..5945 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5114.12415.1prot_H-paniculata_contig5114.12415.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig5114 5052..5945 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig5114.12415.1

>prot_H-paniculata_contig5114.12415.1 ID=prot_H-paniculata_contig5114.12415.1|Name=mRNA_H-paniculata_contig5114.12415.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=298bp
MIHPGDAEAWKTAFVHIEGGGHGQLVVSAADGTWRAILCWASAGRKIDVD
HEGTRASVANLKVHVGIDSPSPHFRQLNRASFGHSLVRYKSLTVFGMAWK
EQFLDFCPAVLVAYAWRDCHVGLLTQERRRFGFRDVDPLAGVFIIFTIGR
RPKKGITHVTPNALDGGNYFHKLFSILLERDVGPTEFDAWLSGEQLTPAL
KLQHLEKWLHMTKASVAVWSRRCSGVEVLGPVDKKASLRSPTLHIGVREG
HVYRLVLDGPWGDRRFRRIAEAAPLRRGTKKRQQTGAAEPSLVSPTP*
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mRNA from alignment at H-paniculata_contig5114:4821..8201+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig5114.12415.1 ID=mRNA_H-paniculata_contig5114.12415.1|Name=mRNA_H-paniculata_contig5114.12415.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3381bp|location=Sequence derived from alignment at H-paniculata_contig5114:4821..8201+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GTCGAACGAGTAGATCAGGCCGCGCCCCTGCCAAGGAGCAACGGGTGGCG GTACATGAGGTCACATGGGGTCACGTATCGGTGCCAGGCTGTGTTCAGTA CGGGATTCAAGATTCGGATCGCGACCTCGTCCTATGGTTCGGGTCACAGG TGGTTCAACTCGAACCCTCTCGGAGGAGATCCTTCACTCGAAAATTTTCA AAGCTGGGCAAACAGGGTGTGGTAGAGGGGCATGATCCATCCGGGAGACG CGGAGGCTTGGAAGACAGCCTTTGTCCACATAGAGGGCGGCGGCCACGGG CAGTTAGTCGTCTCAGCAGCCGACGGCACCTGGCGAGCGATACTCTGCTG GGCCTCCGCGGGCAGAAAGATCGACGTCGACCACGAAGGCACACGGGCTT CCGTGGCGAACTTAAAGGTCCACGTTGGTATCGACTCACCGAGTCCACAC TTCAGACAGCTCAACCGCGCATCCTTTGGCCACAGTCTCGTGAGATATAA ATCTCTAACTGTGTTTGGCATGGCGTGGAAGGAACAATTCCTAGACTTCT GCCCCGCCGTCCTCGTCGCTTATGCTTGGCGAGACTGTCACGTTGGCCTT CTGACGCAAGAGCGGCGGAGATTTGGTTTCCGAGATGTAGACCCGCTCGC AGGGGTGTTCATAATTTTTACTATCGGCAGGCGGCCAAAGAAGGGTATCA CACACGTAACGCCGAATGCCCTGGACGGAGGCAACTATTTCCACAAGCTC TTTTCGATTCTACTCGAACGCGACGTGGGACCGACAGAGTTCGATGCTTG GCTTTCGGGTGAACAACTAACACCAGCCCTGAAACTTCAACACCTCGAGA AGTGGCTTCACATGACCAAGGCGAGCGTTGCGGTGTGGTCGCGTAGGTGC TCGGGGGTGGAAGTACTTGGTCCAGTTGACAAGAAAGCGAGCCTTCGATC TCCAACACTCCATATTGGGGTTCGTGAAGGACATGTATACCGCTTGGTGC TTGATGGACCATGGGGTGACCGTCGTTTTCGTCGCATTGCCGAGGCCGCT CCACTGAGGAGGGGCACCAAGAAGAGACAACAGACGGGGGCAGCAGAACC TTCACTCGTTTCGCCGACCCCCTGAGCGAGATCCTGAACACGAAGCAGTC AGAGCGGGACCAACATACCACTCGGAAGCGCAAGAGAGGAGTCAACAACA AGACCGACTACAAGACTTCGTACGGGCCTCCGGGTACGGCTCTCGAAGAA CTGATGCTCCACCTCCACCTCGGCGACGTCTCATGCAGGGGGTGCTTACC AATTACAGCCACTGGGACTCCCTGACCTTACCAGCACATGATATCACTAT CCGAACATGGTGCGGCGCAAGCATGGGCGGACTGGATCCGGATCAGCTCG AATGCGACCAGGCTACTCGCCTGATCGAGCTGCAAAACGCCTTCGGCCGA AAGCTCTACCGCGGGGTCATGGATTTCGGGTCGCGAGTGAGTACAGCCCG TCCCTCCTGGCGCTGCTCGAGGTGTGTTGGAAGAGGCCGATCGTCGGGGA AGAAGACGCATCGGGATATCTTATGGATAGGAAGATTGGCAGTGCGACAT CCACGGGGCTCACACAGCAGTGTTGATAAGCATGTACACGGTGCCCGCGT TCGGCTACACAGATGATGTGGAGGAGTTCGATGACCACGAAATCGAGGAT TGGACCCTGTACGTTGTTCACCTGGACGAAGGCGGCACCCTGAACTTGTT TTCAACGCGGATCTAACCCCGACTTTTGGCCGGAGCTACAAGCGGTACCG AGAGCTCGCTTGCCGGCTCGCTCCTCGCTGCATCACCCACTTCGTTCCAC CGACGGGGACGGTTCAAAATTGCCACATACCCAGCCTTGTAAGGGATCTT CTCTCCCGGGATCTTGTAGACCCTTCTAAAAGAAGCGGACGCTGCTCGCA AGTTCAAGAAAATAATGCTTCTACGTACGAGCGGCATGCTGCAGCAGAGG TACGCCAACAAGGTCGATGCTGTCATGGTGACTGGTTGCGACTAGGCGTT GGCGGTGGGAGGAGAGATTGTGCGGGTCCTGGGCGAAGTGGAGCGCGTGA GGGCCGAGTTTGGGACCGACAAAGGAGAGTTAGGTGTCGAGATCCTCGAG AGTGTGGACCCGTACCTTTGCTTTGGGACTAGGTGAGTGTGGTACAGAGA CGGCTTCTGGGCGCTTGGGGCGCTGATTATGGACGAAACCCGACTACGTG TGTTGGAGGTACGGAACGTTCTAGAAACTTGTGGGGGGTCCACCTTCAGC TACCAATGCGACGCCTTGTTCTTCCAGGGATCTCAGCCAGTCGCTTCGGC CACTTGTTCAGCCGCGAACTCAAATCTCCCGGCACTCTCAAGTTTGAATC CACCCTCAAGAACCTACTGTTTTCTGAGAGGCGCGTCTTCGGTGGTATCC AAGTGAAGTAGCCCTGAATGAAGGCCACCAAACGAAAAGCGTGGCCAGAA ATCTGCAGAGCTGAGCTACTAGCAACTCTTGAACGACTGGGATGTGGGTT GATGTCCTAGGAAGGTGGAGTCGCTTGTGCGGTCACCGAAGAACATGGCC GGTCCGGAAAGAGCTGCTGTGCGTTCCGTGCAGCGAAATCTGTGTACAAG ACAGGGATCGCACTTATTCCCGTGAATAACCTGCACACATCCTTCACCGA TCTGCCCTCTGGATGTATTAGGACTGCTGATCACCAGCTCGGGTTTTACA TCGGCGCCGATTCCCACGTAAAAAATACTGCAGGGTTTATATACATCCCT CGAGTCGACGTTGTCATCGTTGAGGAAACCGCGTACACGCCTATCCGTGT GCTCAGCATGATCCTCATGGCGACACATAGCGTCGGTGCCCACGTGATCG GGACCTACGACACGTACCAACGGCAGCTCGTTCGCGAGAGCAGCGGCATG TCCATTAGCACGGACAACGTCGACAGGAAGGTCATCCTCGAGCGAGCGTT TCCCACGTGCCTTCATTTGTTTGCTCGTAAGAGGGACAACACTATCGAAG AACAGGTGGAAAAGGACGACGGTCTGTTGTACATTCTCGCTGCTGATCAG GACAATGCGGAGGCGTAGACCGGAGCCCTGGAAAGATTTGGCGGAAGATG CCCGACACGCAGCCCCAATGTTTTCGATTTCCACCTCGCTTACACCAGGG ATTGTGCTCGATTTCATGCATTCCGGGGACTATCGATATACAACGAGGGC GGTGAGTGGATGCCCTCTGGCAAATGACGATGGTGGGTCTACATTATCGG GACCATGGAAAGTCGGGCAGGATACACAAGAATCACACCTACAACATACT CCCTCTGTCTTATAAGTCTCGGGGGTTGGGT
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Coding sequence (CDS) from alignment at H-paniculata_contig5114:4821..8201+

>mRNA_H-paniculata_contig5114.12415.1 ID=mRNA_H-paniculata_contig5114.12415.1|Name=mRNA_H-paniculata_contig5114.12415.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1788bp|location=Sequence derived from alignment at H-paniculata_contig5114:4821..8201+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGATCCATCCGGGAGACGCGGAGGCTTGGAAGACAGCCTTTGTCCACAT
AGAGGGCGGCGGCCACGGGCAGTTAGTCGTCTCAGCAGCCGACGGCACCT
GGCGAGCGATACTCTGCTGGGCCTCCGCGGGCAGAAAGATCGACGTCGAC
CACGAAGGCACACGGGCTTCCGTGGCGAACTTAAAGGTCCACGTTGGTAT
CGACTCACCGAGTCCACACTTCAGACAGCTCAACCGCGCATCCTTTGGCC
ACAGTCTCGTGAGATATAAATCTCTAACTGTGTTTGGCATGGCGTGGAAG
GAACAATTCCTAGACTTCTGCCCCGCCGTCCTCGTCGCTTATGCTTGGCG
AGACTGTCACGTTGGCCTTCTGACGCAAGAGCGGCGGAGATTTGGTTTCC
GAGATGTAGACCCGCTCGCAGGGGTGTTCATAATTTTTACTATCGGCAGG
CGGCCAAAGAAGGGTATCACACACGTAACGCCGAATGCCCTGGACGGAGG
CAACTATTTCCACAAGCTCTTTTCGATTCTACTCGAACGCGACGTGGGAC
CGACAGAGTTCGATGCTTGGCTTTCGGGTGAACAACTAACACCAGCCCTG
AAACTTCAACACCTCGAGAAGTGGCTTCACATGACCAAGGCGAGCGTTGC
GGTGTGGTCGCGTAGGTGCTCGGGGGTGGAAGTACTTGGTCCAGTTGACA
AGAAAGCGAGCCTTCGATCTCCAACACTCCATATTGGGGTTCGTGAAGGA
CATGTATACCGCTTGGTGCTTGATGGACCATGGGGTGACCGTCGTTTTCG
TCGCATTGCCGAGGCCGCTCCACTGAGGAGGGGCACCAAGAAGAGACAAC
AGACGGGGGCAGCAGAACCTTCACTCGTTTCGCCGACCCCCTGAATGATC
CATCCGGGAGACGCGGAGGCTTGGAAGACAGCCTTTGTCCACATAGAGGG
CGGCGGCCACGGGCAGTTAGTCGTCTCAGCAGCCGACGGCACCTGGCGAG
CGATACTCTGCTGGGCCTCCGCGGGCAGAAAGATCGACGTCGACCACGAA
GGCACACGGGCTTCCGTGGCGAACTTAAAGGTCCACGTTGGTATCGACTC
ACCGAGTCCACACTTCAGACAGCTCAACCGCGCATCCTTTGGCCACAGTC
TCGTGAGATATAAATCTCTAACTGTGTTTGGCATGGCGTGGAAGGAACAA
TTCCTAGACTTCTGCCCCGCCGTCCTCGTCGCTTATGCTTGGCGAGACTG
TCACGTTGGCCTTCTGACGCAAGAGCGGCGGAGATTTGGTTTCCGAGATG
TAGACCCGCTCGCAGGGGTGTTCATAATTTTTACTATCGGCAGGCGGCCA
AAGAAGGGTATCACACACGTAACGCCGAATGCCCTGGACGGAGGCAACTA
TTTCCACAAGCTCTTTTCGATTCTACTCGAACGCGACGTGGGACCGACAG
AGTTCGATGCTTGGCTTTCGGGTGAACAACTAACACCAGCCCTGAAACTT
CAACACCTCGAGAAGTGGCTTCACATGACCAAGGCGAGCGTTGCGGTGTG
GTCGCGTAGGTGCTCGGGGGTGGAAGTACTTGGTCCAGTTGACAAGAAAG
CGAGCCTTCGATCTCCAACACTCCATATTGGGGTTCGTGAAGGACATGTA
TACCGCTTGGTGCTTGATGGACCATGGGGTGACCGTCGTTTTCGTCGCAT
TGCCGAGGCCGCTCCACTGAGGAGGGGCACCAAGAAGAGACAACAGACGG
GGGCAGCAGAACCTTCACTCGTTTCGCCGACCCCCTGA
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