mRNA_H-paniculata_contig5114.12415.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig5114.12415.1 vs. uniprot
Match: D7FQN9_ECTSI (Uncharacterized protein n=4 Tax=Ectocarpus TaxID=2879 RepID=D7FQN9_ECTSI) HSP 1 Score: 577 bits (1488), Expect = 8.920e-185 Identity = 332/660 (50.30%), Postives = 409/660 (61.97%), Query Frame = 1
Query: 1 VERVDQAAPLP-RSNGWRYMRSHGVTYRCQAVFSTGFKIRIA-TSSYGSGHRWFNSNPLGGDPSLENFQSWANRVW*RGMIHPGDAEAWKTAFVHIEGGGHGQLVVSAADGTWRAILCWASAGRKIDVDHEGTRASVANLKVHVGIDSPSPHFRQLNRASFGHSLVRYKSLTVFGMAWKEQFLDFCPAVLVAYAWRDCHVGLLTQ--ERRRFGFRDVDPLAGVFIIFTIGRRPKKGITHVTPNALDGGNYFHKLFSILLERDVGPTEFDAWLSGEQLTPALKLQHLEKWLHMTKASVAVWSRRCSGVEVLGPVDKKASLRSPTLHIGVREGHVYRLVLDGPWGDR-----------------RFRRIAEAA-----PLRRGTKKRQQTGAAEPSLVSPTP*ARS*TRSSQSGTNIPLGSAREESTTRPTTRLRTGLRVRLSKN*CSTSTSATS----HAGATGTP*PYQHMISLSEHGAAQAWADWIRISSN-ATRLLA*SSCKTPSAESSTAGSWISGR--E*VQPVPPGAARGVLEEADRRGRRRIGISYG*EDWQCDIHGAHTAVLISMYTVPAFGYTDDVEEFDDHEIEDWTLYANKVDAVMVTVWYRDGFWALGALIMDETRLRVLEVRNVLETCGGSTFSYQCDALFFQGSQPV 1881
VE+VDQAAPL RSNGWRY+ G+TYR QAVF TGF++RI+ SS G G+RWFNS+PLGGDP+L NFQ+WA V GM+HP DAEAW+TAFV +EGGG GQLVVSAAD +WR I CWASAGR+I+VD +G S+ NL+V G+DS SP FRQLN A+FGH +VRY +T FG W++Q C AVLVA WRD V LL + ERRRFGFRDVDP G F+I + G RPKKG NALDGGNYF L+SILLERD+G EFD W+SG+ PAL L HLEKWLHMT ASV VWS R +G +LGP D K +L+ PTLH+GVREGHVYRLVL+GPWGDR +FRRI+E P G + + A+ +VS + + + +P + + G +V SK + +A H G +I + A+ D + ATRL+ + +S + + + + RG + A+ G SYG EDWQCDI+GAHTA L++M TVP FG+ D+VEEFD H IEDWTLY K+DA+ T WYRDGFWALGALI+DETRLRVLE RN LE CG S FS+QCDA+FF+G V
Sbjct: 22 VEQVDQAAPLAGRSNGWRYLGPGGITYRRQAVFGTGFRVRISFPSSPGPGYRWFNSHPLGGDPNLYNFQTWARTVLQGGMVHPRDAEAWRTAFVEVEGGGLGQLVVSAADESWRVIFCWASAGREIEVDTQGIPISLVNLQVRSGLDSQSPFFRQLNIATFGHRVVRYAPITAFGKKWQKQLPGACLAVLVAEVWRDSQVYLLKKPKERRRFGFRDVDP-TGAFMISSRGGRPKKGAPVHNKNALDGGNYFRNLYSILLERDIGEVEFDTWVSGDAEPPALTLLHLEKWLHMTNASVVVWSHRGTGANILGPSDGKTNLQLPTLHVGVREGHVYRLVLEGPWGDRFGSSLDVAIDHSVRTYRKFRRISEMTVEEQEPDTTGFVTKTFSCVAD--IVSDI---------------MAINETGGDHNRQPVEKRKHGRKVSESKTWYAPPGTALDELMLHLHLAGVSCEAHGVIIRTWCSASMGGLDPDDFEPDQATRLIELHNALGLKFHRGVLDFRVSRQYSQSLLALLEVCWRGPIVGAEDAS----GSSYGREDWQCDINGAHTAALMNMETVPVFGHMDEVEEFDGHNIEDWTLYIIKLDALERT-WYRDGFWALGALILDETRLRVLEARNALELCGASDFSFQCDAVFFRGCSSV 658
BLAST of mRNA_H-paniculata_contig5114.12415.1 vs. uniprot
Match: A0A6H5KSM3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSM3_9PHAE) HSP 1 Score: 558 bits (1437), Expect = 1.600e-175 Identity = 346/835 (41.44%), Postives = 422/835 (50.54%), Query Frame = 1
Query: 1 VERVDQAAPLP-RSNGWRYMRSHGVTYRCQAVFSTGFKIRIATSSYGSGHRWFNSNPLGGDPSLENFQSWANRVW*RGMIHPGDAEAWKTAFVHIEGGGHGQLVVSAADGTWRAILCWASAGRKIDVDHEGTRASVANLKVHVGIDSPSPHFRQLNRASFGHSLVRYKSLTVFGMAWKEQFLDFCPAVLVAYAWRDCHVGLLTQERRRFGFRDVDPLAGVFIIFTIGRRPKKGITHVTPNALDGGNYFHKLFSILLERDVGPTEFDAWLSGEQLTPALKLQHLEKWLHMTKASVAVWSRRCSGVEVLGPVDKKASLRSPTLHIGVREGHVYRLVLDGPWGDR-----------------RFRRIAEAAPLRR-------GTKKRQQTGAAEPSLVSPTP*ARS*TRSSQSGTNIPLGSAREESTTRPTTRLRTGLRVRLSKN*CSTSTSATSHAGATGTP*PYQHMISLSEHGAAQAWADWIRISSNATRLLA*SSCKTPSAESSTAGSWISGRE*VQPVPPGAAR--------------GVLE---------------EADRRG-----RRRIGISYG*EDWQCDIHGAHTAVLISMYTVPAFGYTDDVEEFDDHEIEDWTLY--------------------------------------------------------------------------------------------------ANKVDAVMVT---------------------------------------------------VWYRDGFWALGALIMDETRLRVLEVRNVLETCGGSTFSYQCDALFFQGSQPV 1881
VE+VDQA PLP R+NGWRY GV YR QAVF TG+++RI+ +S G G+RWFNS+P GGDPSLENFQSWA R W RG++HP DA+AWKTAF+ +EGGG GQLVVSAAD TWRAILCW SAGR+I++DHEG AS++NL+V GI+S SP FRQLN ASFGH +VRY+ LT F M WK++ C AVLVA AWRDC + LL +ERRRFGFRDVDP+ G F+ T G R ++G T NALDGGNYF LFS+LL+RDVG EFD WLSG PAL L+ LEKWL+ T+A+V VWS R SG VLGP+DKK LR LH+GVREGHVYRL LDGPW DR RFRRIAEA + G+KK T +VS + + + EE+ + R + R S+ +T + H++ +S G +++ W +S A + + C + G + + P A R GVL+ E RG G SYG EDWQCDI+GAHTA L+SM VP FG+ D+VEE+DDH IEDWTLY A+++DAVMVT WYRDGFWALGALI+DETRLRVLE RN LE+CG FSYQCDA+FF+GS V
Sbjct: 26 VEQVDQAEPLPNRNNGWRYKGPRGVMYRRQAVFGTGYRVRISATSRGPGYRWFNSHPAGGDPSLENFQSWATRTWRRGLVHPRDADAWKTAFIDVEGGGRGQLVVSAADDTWRAILCWGSAGRRIEIDHEGIPASLSNLQVRAGIESSSPRFRQLNIASFGHRVVRYEPLTTFCMTWKKRLPGACLAVLVADAWRDCQLDLLIRERRRFGFRDVDPITGSFMNSTGGGRRREGATTPLRNALDGGNYFRNLFSVLLDRDVGSEEFDTWLSGVSEPPALTLRDLEKWLNKTRANVVVWSHRGSGDHVLGPIDKKTDLRPRALHVGVREGHVYRLELDGPWRDRFGSSLDVAIEHSVKTQRRFRRIAEAVEEKDKPDTTDCGSKK---TFLCVADIVSDL---------------MAINQSEEENGHQQAARKKRKRGKRRSEF----NTWYAPPGTVLDELMLHLHLVGVSCRGRLTSYSHWDSLSLPAHGITIRTWCSAS----------MGGLDPDELEPDQATRLIELHNELGLKFYHGVLDFRVSSQYSQSLLALLEVCWRGPIVGAEEVSGTSYGPEDWQCDINGAHTAALMSMEVVPVFGHVDEVEEYDDHGIEDWTLYIIELDAFGKPDVFFNADVTPVFGRNYKRYLDLVDTAARHRVTHFVRPSRIVSMCHIPKLVRDLLAHEPGDPFLQDADCARKFKKGIFVRASGMLQQRYADRIDAVMVTGCDEASAVGGKIVPVLGEVDRVKAELRTGQGKLGIESLRTGDAYLCLDAERTWYRDGFWALGALILDETRLRVLEARNALESCGACDFSYQCDAVFFRGSSSV 828
BLAST of mRNA_H-paniculata_contig5114.12415.1 vs. uniprot
Match: A0A6H5KMS8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMS8_9PHAE) HSP 1 Score: 518 bits (1333), Expect = 8.640e-167 Identity = 326/742 (43.94%), Postives = 398/742 (53.64%), Query Frame = 1
Query: 1 VERVDQAAPLP-RSNGWRYMRSHGVTYRCQAVFSTGFKIRIA-TSSYGSGHRWFNSNPLGGDPSLENFQSWANRVW*RGMIHPGDAEAWKTAFVHIEGGGHGQLVVSAADGTWRAILCWASAGRKIDVDHEGTRASVANLKVHVGIDSPSPHFRQLNRASFGHSLVRYKSLTVFGMAWKEQFLDFCPAVLVAYAWRDCHVGLL--TQERRRFGFRDVDPLAGVFIIFTIGRRPKKGITHVTPNALDGGNYFHKLFSILLERDVGPTEFDAWLSGEQLTPALKLQHLEKWLHMTKASVAVWSRRCSGVEVLGPVDKKASLRSPTLHIGVREGHVYRLVLDGPWGDR-----------------RFRRIAEAAPLRR-------GTKKRQQTGAAEPSLVSPTP*ARS*TRSSQSGTNIPLGSAREESTTRPTTRLRTGLRVRLSKN*CSTSTSATSHAGATGTP*PYQHMISLSEHGAAQAWADWIRISSNATRLLA*SSCKTPSA-------ESSTAGSWISGRE*VQPVPPGAARGVLE---------------EADRRG-----RRRIGISYG*EDWQCDIHGAHTAVLISMYTVPAFGYTDDVEEFDDHEIEDWTLYANKVDAV------------------------------------------------------------MVTVWYRDGFWALGALIMDETRLRVLEVRNVLETCGGSTFSYQCDALFFQGSQPV 1881
VE+VDQ AP+ RSNGWR +RI+ SS G G+RWFNS+PLGGDP+L NFQ+WA V GM+HP DAEAW+TAFV +EGGG GQLVVSAAD +WR ILCWASAGR+I+VD G S+ +L+V GIDS SP FRQLN A+FGH +VRY +T FG W++Q C AVLVA WRD V LL T+ERRRFGFRDVDP G F+I + G RPKKG NALDGGNYF L+SILLERD+G EFD W+SG+ PAL L HLEKWLHMT ASV VWS R +G +LGP D K +L+ PTLH+GVREGHVYRLVL+GPWGDR +FRRI+E + GTK T + +VS + + + +P + + G +V SK + +A + H+ +S G ++ W +S A ++ + C E A I E + RGVL+ E RG G SYG EDWQCDI+GAHTA L++M TVP FG+ D+VEEFD H IEDWTLY K+DA+ + WYRDGFWALGALI+DETRLRVLE RN LE CG S FS+QCDA+FF+GS V
Sbjct: 22 VEQVDQVAPVVGRSNGWR--------------------VRISFPSSPGPGYRWFNSHPLGGDPNLYNFQTWARTVLQGGMVHPRDAEAWRTAFVEVEGGGLGQLVVSAADESWRVILCWASAGRRIEVD-TGIPISLVSLQVRSGIDSQSPFFRQLNIATFGHRVVRYAPITAFGKKWQKQLPGACLAVLVADVWRDSQVYLLKKTKERRRFGFRDVDP-TGAFMISSRGGRPKKGAPVHNKNALDGGNYFRNLYSILLERDIGEVEFDTWVSGDAEPPALTLLHLEKWLHMTNASVVVWSHRGTGANILGPSDGKTNLQPPTLHVGVREGHVYRLVLEGPWGDRFGSSLDVAIDHSVRTYRKFRRISEMTVEEQEPDTTGFGTK----TFSCVADIVSDI---------------MAINQTGGDHNRQPVEKRKHGRKVAESKTWYAPPGTALDELML------HLHLAGVSCKGKLTNYSRWDSLSLPAHGVVIRTWCSASMGGLDPDDFEPDQATRLI---ELHNALGLKFHRGVLDFRVSSQYSQSLLALLEVCWRGPIVGAEDASGSSYGREDWQCDINGAHTAALMNMETVPVFGHMDEVEEFDGHNIEDWTLYTIKLDALGEPDVFLDADVMPVFGRNYKRYLDLIDNAPRHRVTHFVRPSRTVSRCHIPKLVRDLLAHELERTWYRDGFWALGALILDETRLRVLEARNALELCGASDFSFQCDAVFFRGSSSV 713
BLAST of mRNA_H-paniculata_contig5114.12415.1 vs. uniprot
Match: D8LFQ2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFQ2_ECTSI) HSP 1 Score: 518 bits (1334), Expect = 2.380e-160 Identity = 335/837 (40.02%), Postives = 409/837 (48.86%), Query Frame = 1
Query: 1 VERVDQAAPLP-RSNGWRYMRSH-GVTYRCQAVFSTGFKIRIATSSY--GSGHRWFNSNPLGGDPSLENFQSWANRVW*RGMIHPGDAEAWKTAFVHIEGGGHGQLVVSAADGTWRAILCWASAGRKIDVDHEGTRASVANLKVHVGIDSPSPHFRQLNRASFGHSLVRYKSLTVFGMAWKEQFLDFCPAVLVAYAWRDCHVGLLTQERRRFGFRDVDPLAGVFIIFTIGRRPKKGITHVTPNALDGGNYFHKLFSILLERDVGPTEFDAWLSGEQLTPALKLQHLEKWLHMTKASVAVWSRRCSGVEVLGPVDKKASLRSPTLHIGVREGHVYRLVLDGPWGDR-------------------------RFRRIAEAAPLRRGTKKRQQTGAAEPSLVSPTP*ARS*TRSSQSGTNIPLGSAREESTTRPTTRLRTG------------LRVRLSKN*CSTSTSATSHAGATGTP*PYQHMISLSEHGAAQAWADWIRISSN-ATRLLA*-----------------SSCKTPSAESSTAGSWISGRE*VQPVPPGAARGVLEEADRRGRRRIGISYG*EDWQCDIHGAHTAVLISMYTVPAFGYTDDVEEFDDHEIEDWTLY--------------------------------------------------------------------------------------------------ANKVDAVMVT-----------------------------------------------------VWYRDGFWALGALIMDETRLRVLEVRNVLETCGGSTFSYQCDALFFQGSQPV 1881
E+VDQAAPLP RSNGWRY+ G TYR QAVF GF++R+ G GHRWFNS+PLGGDP L +FQ+WA + R ++H DA+AW+ AFV +EGGGHGQLVVSAAD TWR ILCW S GR+IDV+ G S+ +L+V G+ S P FRQLN ASFGH LVRY LT FG+ WKE+ C AVLVA +WRDC VGLL ++RRRFGFRDVDPL G F+ G R KKG+ PNALDGGNYF L+SI+LERDVG TEF AWLSGE+ PA+ ++HL+KWL TKASV VWS R SG EV+G + SLR LH+GVREGHVYRLVLDGPW DR FRRIAEAA G +K A T + SSQ+ T+ R T +T L + L C+ ++ SH + P +I + GA+ D + + ATRL+ SS +PS + W RG + A+ G +YG DWQCDI+GAHTA ++SM +PAF + D+V+ FD H+IEDWTLY A++++AVMVT VWYRDGFWALG LI+DETRLRVLEVRN+LE CGGS FSYQCDA+FF+G V
Sbjct: 28 AEQVDQAAPLPDRSNGWRYLGPREGETYRRQAVFGAGFRLRLPFPRLCPGPGHRWFNSHPLGGDPDLPDFQAWARTMLRRRLVHRDDADAWRAAFVDVEGGGHGQLVVSAADETWRVILCWGSRGRRIDVNQHGIPTSLVDLQVRAGVISEDPRFRQLNIASFGHRLVRYDPLTEFGVIWKERLPGACLAVLVADSWRDCQVGLLARDRRRFGFRDVDPLTGAFMDSRAGGRSKKGVKRAPPNALDGGNYFRNLYSIMLERDVGSTEFSAWLSGEECVPAVTVRHLDKWLKTTKASVVVWSHRGSGAEVVGAKGQTTSLRPRALHVGVREGHVYRLVLDGPWKDRFTGAREGAVGPSLHVAVEHCVRTRRLFRRIAEAAEEGEGEEKSDGDTRAFGRCADMT---EAILTSSQTDTDQQTARKRRRGTDDKADSKKTWYAPPGTALDELMLHLHLGGVACAGRLTSYSHWDSLSLP--AHGIIIRTWCGASMGGLDPDSLECDEATRLIELHGTLGRKLIRGVMDFRVSSEYSPSLLALLEVCW---------------RGPIVGAEDAS----GTTYGPGDWQCDINGAHTAAMLSMENLPAFTHMDEVQVFDGHDIEDWTLYVVRLEAVGDPDVFLNADVTPVFGRNYKRYLALIKTPAPHRVSHFVRPARTIQKCHIPRLVQDLLARDLGEPLLQDPDAARRFKKGLFVRTSGLLQQRHADRINAVMVTTSKEAMAVGGKIVPVLGEVNRIKSELRKNGTDGGLGIEKLDSGDAYLCFEASRVWYRDGFWALGTLILDETRLRVLEVRNMLEACGGSAFSYQCDAVFFRGPPEV 840
BLAST of mRNA_H-paniculata_contig5114.12415.1 vs. uniprot
Match: A0A6H5JCS9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCS9_9PHAE) HSP 1 Score: 491 bits (1264), Expect = 5.420e-148 Identity = 294/614 (47.88%), Postives = 357/614 (58.14%), Query Frame = 1
Query: 1 VERVDQAAPLP-RSNGWRYMRSHGVTYRCQAVFSTGFKIRIA-TSSYGSGHRWFNSNPLGGDPSLENFQSWANRVW*RGMIHPGDAEAWKTAFVHIEGGGHGQLVVSAADGTWRAILCWASAGRKIDVDHEGTRASVANLKVHVGIDSPSPHFRQLNRASFGHSLVRYKSLTVFGMAWKEQFLDFCPAVLVAYAWRDCHVGLLTQERRRFGFRDVDPLAGVFIIFTIGRRPKKGITHVTPNALDGGNYFHKLFSILLERDVGPTEFDAWLSGEQLTPALKLQHLEKWLHMTKASVAVWSRRCSGVEVLGPVDKKASLRSPTLHIGVREGHVYRLVLDGPWGDR-----------------RFRRIAEAAPLRR-------GTKKR-------------QQTGAAEPSLVSPTP*ARS*TRSSQSGTNIPLGSAREESTTRPTTRLRTGLRVRLSKN*CSTSTSATSHAGATGTP*PYQHMISLSEHGAAQAWADWIRISSN-ATRLLA*SSCKTPSAESSTAGSWISGR--E*VQPVPPGAARGVLEEADRRGRRRIGISYG*EDWQCDIHGAHTAVLISMYTVPAFGYTDDVEEFDDHEIEDWTLYANKVDAV 1716
VE+VDQA PL RSNGWRY GVTYR QAVF TG++IRI+ SS G GH WFNS+P+GGDP+L +FQ+WA V RGM+HP DAEAW+TAFV +EGGG GQLVVS+AD TWR ILCWASAGR+IDVD +G S+ +L+V G+DS SP FRQLN A+FGH +VRY +T FG W+EQ C AVLVA WRD V LL +ER+RFGFRDVDP G F G RPKKG NALDGGNYF L+SILLERD+G TEFD W+SG+ PAL L+HLEKWL MTKA V VWS R +G +LGP + K SLR PTLH+GVREGHVYRLVL+G W DR +FRRI+E GTK +QTG S P G+A +E L + L S T+++ P Q +I + A+ D + ATRL+ S +S + + + + RG + A+ G YG EDWQCDI+GAHTA L++M TVP FG+ D+VEEFD H IEDWTLY K+DA+
Sbjct: 22 VEQVDQAEPLANRSNGWRYRGPRGVTYRRQAVFGTGYRIRISFPSSAGPGHTWFNSHPVGGDPNLYSFQTWARMVLERGMVHPRDAEAWRTAFVDVEGGGQGQLVVSSADETWRVILCWASAGRRIDVDSQGIPFSLLSLQVRSGVDSQSPLFRQLNIATFGHRVVRYTPMTAFGKKWQEQLPGACLAVLVADTWRDSQVDLLARERKRFGFRDVDP-TGAFTSSCGGGRPKKGAPAQNKNALDGGNYFRNLYSILLERDIGETEFDKWVSGDTEPPALTLRHLEKWLSMTKAGVVVWSHRGTGANILGPSEGKTSLRPPTLHVGVREGHVYRLVLEGRWRDRFGSSLDVAVEHRVRTYRKFRRISEMTEEEEEPDVTGIGTKTFSCVADIVSDIMAIKQTGGGHNRQAVEKKRKHGRKVSECKTWYAPPGTALDE------------LMLHLHLAGVSCKGKLTNYSRWDSLSLPAQGIIIRTWCSASMGRLDPDDFEPDQATRLIELHSALGLKFYRGVLDFRVSSQYSQSLLALLGVCWRGPIVGAEDAS----GSCYGREDWQCDINGAHTAALMNMETVPVFGHMDEVEEFDGHNIEDWTLYIIKLDAL 618
BLAST of mRNA_H-paniculata_contig5114.12415.1 vs. uniprot
Match: A0A6H5KBM1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBM1_9PHAE) HSP 1 Score: 466 bits (1198), Expect = 7.120e-144 Identity = 313/716 (43.72%), Postives = 383/716 (53.49%), Query Frame = 3
Query: 1047 RSTEEGHQEETTDGGSRTFTRFADPLSEILNTKQSERDQHTTRKRKRGVNNKTDYKTS-YGPPGTALEELMLHLHLGDVSCRG------HWDSLTLPAHDITIRTWCGASMGGLDPDQLECDQATRLIELQNAFGRKLYRGVMDF-----------------GSRVSTAR-------------------------------------------------------------PSWRCSRCVGRG-------RSSGKKTHRDI---------LWI---GRLAVRHPRGSHS---SVDKHVHGARVRLHR*CGGVR*PRNRGLDPVRQQGRCCHGDCVVQRRLLG----AWGADYGRNPTTCVGGTERSRNLWGVHLQLPMRRLVLPGISAS---RFGHLFSRELKSPGTLKFESTLKNLLFSERRVFGGIQAT------------------KRKAWPEICRAELLATLERLGCGLMS*EGGVACAVTEEHGRSGKSCCAFRAAKSVYKTGIALIPVNNLHTSFTDLPSG-CIRTADHQLGFYIGADSHVKNTAGFIYIPRVDVVIVEETAYTPIRVLSMILMATHSVGAHVIGTYDTYQRQLVRESSGMSISTDNVDRKVILERAFPTCLHLFARKRDNTIEEQVEKDDGLLYILAADQDNAEA*TGALERFGGRCPTR-SPNVFDFHLAYTRDCARFHAFRGLSIYNEGGEWMPSGK 2792
R + G EE +DG +RTF R AD IL++ Q E DQ T RKR+RG ++K D K + Y PPGTAL+ELMLHLHLG V+C G HWDSL+LP HDI IRTWCGA MGGLDPD LECD+ATRLIEL GRKL RGVMDF GS STAR P+ +C G R G+ RD+ L++ G L RH ++ + + ++ G V NR +R+ G G+ +++ G ++ A RN GG+ S V L+ LP + A R+ H FS ELK+PGTLKFE LKN S+R VF GI+ KRK WP+IC AE A+LE+L LMS E V CAVT +HG +GKS C AAK+V++T + L P N+L TS TDLP G ++TADHQLGFYIG D+ V+ T G I+IPRVDVV +EE AY + LSMIL A HS G HVIGTY+T+Q Q RE SG+SIS DNVDR+V+LER+FP C HLFARKR TI+EQVE DD LLYIL A ++A+A ALERFG P P+V DFHLAYTRDC RFHA RGL+ NE G W G+
Sbjct: 156 RRPKRGKGEEKSDGDTRTFGRCADMAEAILSSSQMETDQQTARKRRRGTDDKADSKKNWYAPPGTALDELMLHLHLGGVTCTGKLTSYSHWDSLSLPVHDIIIRTWCGARMGGLDPDVLECDEATRLIELHGTLGRKLIRGVMDFRVSSEYSPSLLVLLEGTGSATSTARNGTHTVAMLSMDDLPAYTHTDEVQAFDGHDIEDRTLYVVRLEAGGDPDVILNADRVTHFVRPARTVQKCHIPGLVHDLLARDLGESLLRDVDAARRFEKGLFVRTSGLLQQRHADRINAVMVTTSEEAMAVGGKIVPILGEV----NRIKSELRKNGT--DGELGIEKLDSGDAYLSFEASRVRNMLEACGGSAFSYQCDAVFLR------GLPEVQAEARHRYEHFFSGELKTPGTLKFEPALKNAASSDR-VFAGIEENLGTMGAAHVAWRSVGKDDKRKMWPDICSAESPASLEQLLRELMSQEDRVVCAVTGKHGGAGKSYCTLHAAKAVFETDLVLTPTNSLRTSHTDLPPGWSVKTADHQLGFYIGDDTRVRKTVGSIHIPRVDVVKIEEAAYMSLHALSMILAAAHSKGVHVIGTYETHQLQPAREGSGLSISVDNVDRQVVLERSFPICFHLFARKRVRTIDEQVEVDDSLLYILDAANNSAKAQIRALERFGEIGPAGCDPHVSDFHLAYTRDCPRFHAVRGLTRCNEAGGWDALGQ 858
BLAST of mRNA_H-paniculata_contig5114.12415.1 vs. uniprot
Match: A0A6H5J754_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J754_9PHAE) HSP 1 Score: 469 bits (1207), Expect = 1.290e-143 Identity = 311/769 (40.44%), Postives = 372/769 (48.37%), Query Frame = 1
Query: 1 VERVDQAAPLP-RSNGWRYMRSHGVTYRCQAVFSTGFKIRIA-TSSYGSGHRWFNSNPLGGDPSLENFQSWANRVW*RGMIHPGDAEAWKTAFVHIEGGGHGQLVVSAADGTWRAILCWASAGRKIDVDHEGTRASVANLKVHVGIDSPSPHFRQLNRASFGHSLVRYKSLTVFGMAWKEQFLDFCPAVLVAYAWRDCHVGLL-TQERRRFGFRDVDPLAGVFIIFTIGRRPKKGITHVTPNALDGGNYFHKLFSILLERDVGPTEFDAWLSGEQLTPALKLQHLEKWLHMTKASVAVWSRRCSGVEVLGPVDKKASLRSPTLHIGVREGHVYRLVLDGPWGDRRFRRIAEAAPLRRGTKKRQQTGAAEPSLVSPTP*ARS*TRSSQSG---TNIPLGSAREESTTRPTTRLRTGLRVRLSKN*CSTSTSATSHAGATGTP*PYQHMISLSEHGAAQAWADWIRISSNATRLLA*SSCKTPSAESSTAGSWIS----GRE*VQPVPPGAAR--------------GVLE---------------EADRRG-----RRRIGISYG*EDWQCDIHGAHTAVLISMYTVPAFGYTDDVEEFDDHEIEDWTLYANKVDAVMV--------------------------------------------------------------------------------------------------TVWYRDGFWALGALIMDETRLRVLEVRNVLETCGGSTFSYQCDALFFQGSQPV 1881
VE+VDQA PL RSNGWRYM GVTYR QAVF TGF+IRI+ SS G GHRWFNS+PLGGDP+L NFQ+WA V RGM LVVSAAD TWR ILCWASAGR+IDVD +G S+ NL+V G+DS SP FRQLN A+FGH +VRY +T FG W+EQ C AVLVA AWRD V LL +ERRRFGFRD P+ NALDGGNYF L+SILLERD+G EFD W+SG+ PAL L HLEKWLHMTKASV VWS R +G +LGP D K +LR PT+H+GVREGHVYRLVL+GPW DR + + ++ TG + Q+G + P+ R+ G +V K + +A + H+ +S G ++ W +S A L+ +W S G + P A R GVL+ E RG G SYG EDWQCDI+GAHTA L++M TVP FG+ D+VEEFD H IEDWTLY K+DA++ WYRDGFWAL L +DETRLRVLE RN LE+CG S FSYQCDA+FF+GS V
Sbjct: 23 VEQVDQAEPLAGRSNGWRYMGPGGVTYRRQAVFGTGFRIRISFPSSPGPGHRWFNSHPLGGDPNLYNFQTWARTVLQRGM-----------------------LVVSAADDTWRVILCWASAGRRIDVDTQGIPISLVNLQVRSGVDSQSPFFRQLNIATFGHRVVRYAPITAFGKKWQEQLPGACLAVLVADAWRDSQVDLLKARERRRFGFRDGAPVQN-------------------KNALDGGNYFRNLYSILLERDIGEVEFDKWVSGDTEPPALTLLHLEKWLHMTKASVVVWSHRGTGANILGPPDGKTNLRPPTVHVGVREGHVYRLVLEGPWRDR----FGSSLDVAIEHREPDPTGFGAKTFSCVADIVSDIMAIKQTGGDHSRQPVEKKRKH-----------GRKVSECKTWYAPPGTALDELML------HLHLAGVSCKGKLTNYSRWDSLSLPAHGLII--------------RTWFSASMGGLDPDDFEPDQATRLIELHNALGLKFCRGVLDFRVSSQYSKSLLALLEVCWRGPIVGAEDASGSSYGREDWQCDINGAHTAALMNMETVPVFGHMDEVEEFDGHNIEDWTLYIIKLDALVTHYVGPSRTVSRCHIPKLMKDLLTHELGDPLLEDADYARRVKKRNIRAGQCDEASAVGGKIVPVLCEVDRVKAELRTGQGDLGIDSLRTGNAYLCFDAERTWYRDGFWALRTLTLDETRLRVLEARNALESCGASDFSYQCDAVFFRGSSSV 714
BLAST of mRNA_H-paniculata_contig5114.12415.1 vs. uniprot
Match: A0A6H5KTC4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTC4_9PHAE) HSP 1 Score: 465 bits (1197), Expect = 1.240e-142 Identity = 307/800 (38.38%), Postives = 386/800 (48.25%), Query Frame = 1
Query: 1 VERVDQAAPLP-RSNGWRYMRSH-GVTYRCQAVFSTGFKIRIATSSY--GSGHRWFNSNPLGGDPSLENFQSWANRVW*RGMIHPGDAEAWKTAFVHIEGGGHGQLVVSAADGTWRAILCWASAGRKIDVDHEGTRASVANLKVHVGIDSPSPHFRQLNRASFGHSLVRYKSLTVFGMAWKEQFLDFCPAVLVAYAWRDCHVGLLTQERRRFGFRDVDPLAGVFIIFTIGRRPKKGITHVTPNALDGGNYFHKLFSILLERDVGPTEFDAWLSGEQLTPALKLQHLEKWLHMTKASVAVWSRRCSGVEVLGPVDKKASLRSPTLHIGVREGHVYRLVLDGPWGDR-------------------------RFRRIAEAAPLRRGTKKRQQTGAAEPSLVSPTP*ARS*TRSSQSGTNIPLGSAREESTTRPTTRLRTGLRVRLSKN*CSTSTSATSHAGATGTP*PYQHMISLSEHGAAQAWADWIRISSN-ATRLLA*SSCKTPSAESSTAGSWISGRE*VQPVPPGAA------RGVLEEADRRGRRRIGISYG*EDWQCDIHGAHTAVLISMYTVPAFGYTDDVEEFDDHEIEDWTL------------------------------------------------------------------------------------YANKVDAVMVT-----------------------------------------------------VWYRDGFWALGALIMDETRLRVLEVRNVLETCGGSTFSYQCDALFFQGSQPV 1881
VE+VD+A P+ RSNGWRY+ G TYR QAVF GF++ + G GHRWFNS+PLGGDP L +FQ+WA + R ++HP DA+AW+ AFV +EG GHGQLVVSAAD TWR ILCW S GR+IDV+ S+ +L+V G+ S P FRQLN A FGH LVR+ +T FG+ W E+ AVLVA +WRDC + LL +++RRF F D L+GV PNALDGGNYF L+S +LERDVG TEF AWL GE+ TPA+ ++HLEKWL TKASV VWS R SG EV GP D+ SLR LH+GVREGHVYRLVLDGPW DR FRR+AEAA G +K T L + + E+ + T + R G+ + S T TS++ P +I + GA+ D + + ATRL+ + G + R + P A RG + A+ +G +YG DWQCDI+GAHTA + SM +PAF + DD + FD H+IEDWTL +A++++AVMVT VWYRDGFWALG LI+DETRLRVLEVRN+LE CGGS FSYQCDA+FF+G V
Sbjct: 26 VEQVDEAVPMSTRSNGWRYLGPREGETYRRQAVFGAGFRLHLPFPRLPPGPGHRWFNSHPLGGDPDLPDFQAWARTMLRRRLVHPRDADAWRAAFVDVEGSGHGQLVVSAADETWRVILCWGSRGRRIDVNQHSIPTSLVDLQVRAGVTSEDPRFRQLNIACFGHRLVRHDPVTEFGVTWTERSPGAYLAVLVADSWRDCQIDLLERDQRRFAF---DLLSGV--------------KRAAPNALDGGNYFCNLYSKILERDVGLTEFSAWLLGEECTPAVTVRHLEKWLKTTKASVVVWSHRGSGAEVRGPKDQPTSLRPRALHVGVREGHVYRLVLDGPWKDRFTSAREGAVGPSLDVAVEHCARTRRLFRRVAEAAEEGEGEEKSDGDTRTFGRCADMT--------------QAILATGQTETDQQTTRKRRRGVDDKAD----SKETWLTSYSHRDSLSLPAHGIIVRTWRGASMDGLDPDSLECDEATRLIE----LHGTLGRKLIGGVMDFRVSSEYSPSLLALLEVCWRGPIAGAEDA----LGTTYGPGDWQCDINGAHTAAMPSMENLPAFTHMDDGQAFDGHDIEDWTLCVVRLEAGGDPDVFRYLALIQTPALNRVTHFVRPARTDRKCHIPELVQDVLARDLGEPLLQDLDAARRFKKGLLVRTSGLLQRRHAHRINAVMVTTSDEAMAVGGKIVPVLGEVNRIKSELRKNGTDGELGIEKLDSGDAYLSFEASRVWYRDGFWALGTLILDETRLRVLEVRNMLEACGGSAFSYQCDAVFFRGPPEV 782
BLAST of mRNA_H-paniculata_contig5114.12415.1 vs. uniprot
Match: D7G6J5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6J5_ECTSI) HSP 1 Score: 440 bits (1131), Expect = 1.860e-136 Identity = 291/633 (45.97%), Postives = 361/633 (57.03%), Query Frame = 3
Query: 1050 STEEGHQEETTDGGSRTFTRFADPLSEILNTKQSERDQHTTR------KRKRGVNNKTDYKTSYGPPGTALEELMLHLHLGDVSCRG------HWDSLTLPAHDITIRTWCGASMGGLDPDQLECDQATRLIELQNAFGRKLYRGVMDFG-------SRVSTARPSWRCSRCVGRGRSSGKKTHRDILWIGRLAVRHPRGSHSSVDKHVHGARVRLHR*CGGVR*PRNRGLDPVRQQGRCCHGDCVVQRRLLGAW-------GAD----YGRNPTTCVGGTERSRNLWGVHLQLPMR---RLVLPGISASRFGHLFSRELKSPGTLKFESTLKNLLFSERRVFGGIQATKRKAWPEICRAELLATLERLGCGLMS*EGG-VACAVTEEHGRSGKSCCAFRAAKSVYKTGIALIPVNNLHTSFTDLPSG-CIRTADHQLGFYIGADSHVKNTAGFIYIPRVDVVIVEETAYTPIRVLSMILMATHSVGAHVIGTYDTYQRQLVRESSGMSISTDNVDRKVILERAFPTCLHLFARKRDNTIEEQVEKDDGLLYILAADQDNAEA*TGALERFGGRCPT-RSPNVFDFHLAYTRDCARFHAFRGLSIYNEGGEWMPSGK*RWWVYIIGTMESRAG 2840
+TEE + + T G++TF+ AD +S+IL Q+E KR++ ++ KT Y PPGTAL+ELMLHLHL VSC G HWDSL+LPAH ITIRTWC ASMGGLDPD+ E DQATRLIEL NA G K YRGV+DF S ++ WR VG SG R+ W + G+H++ ++ V H +D V + D + L A AD +GRN + + + H P R R +P + +G + S G N S + +TKR WPEIC AE + LE L GL+S +G V CAVT EHG +GKS CAFRAAK ++KTG+ + P N+L TSFTD+PSG ++TADHQLGFY+G DS ++ TAG I +VDV+I+EE AY P+R LSMIL A G HVIGTYDT+Q Q V ESSGMSIS+DNVDRKVILE+AFPTC H+FARKRD T EEQVE DDGLLYILAA ++ EA T A+ERFG CPT P+ +FHLAYTRDCARFHAFRGL +E G W G+ +IG G
Sbjct: 202 TTEEEEEPDRTGCGTKTFSCVADIVSDILANNQTEXXXXXXXXXXXXXKREKA----SEPKTWYAPPGTALDELMLHLHLVGVSCSGRLSNYSHWDSLSLPAHGITIRTWCSASMGGLDPDEFEPDQATRLIELHNALGLKFYRGVLDFRVSSQYSQSLLALLEVCWR-GPIVGAEDVSGSSYGRED-WQCDI-----NGAHTAALMNMETVPVFGH-------------MDEVEEFDGHDIEDWTLYIINLDALDEPDVFLNADVTPVFGRNYKRYLDLIDTAPRHRVTHFVRPSRTVGRCHIPTLVIPLWGGV-GAGFSSMGDAH------NAWCSLEK------STKRNLWPEICEAESPSKLESLLRGLLSQQGSRVVCAVTGEHGGAGKSYCAFRAAKKIFKTGLVVTPTNSLRTSFTDMPSGWSVKTADHQLGFYLGNDSEMRKTAGSIRTLKVDVIIIEEAAYMPLRTLSMILAAARCSGTHVIGTYDTHQLQPVCESSGMSISSDNVDRKVILEKAFPTCFHVFARKRDKTTEEQVEMDDGLLYILAAGNNSQEAQTRAIERFGRECPTGNDPSPSEFHLAYTRDCARFHAFRGLLGCDEAGGWDGLGR----TTVIGAQHRDLG 793
BLAST of mRNA_H-paniculata_contig5114.12415.1 vs. uniprot
Match: A0A6H5JTS3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTS3_9PHAE) HSP 1 Score: 444 bits (1141), Expect = 2.220e-132 Identity = 270/591 (45.69%), Postives = 327/591 (55.33%), Query Frame = 1
Query: 76 YRCQAVFSTGFKIRIATSSYGSGHRWFNSNPLGGDPSLENFQSWANRVW*RGMIHPGDAEAWKTAFVHIEGGGHGQLVVSAADGTWRAILCWASAGRKIDVDHEGTRASVANLKVHVGIDSPSPHFRQLNRASFGHSLVRYKSLTVFGMAWKEQFLDFCPAVLVAYAWRDCHVGLLTQERRRFGFRDVDPLAGVFIIFTIGRRPKKGITHVTPNALDGGNYFHKLFSILLERDVGPTEFDAWLSGEQLTPALKLQHLEKWLHMTKASVAVWSRRCSGVEVLGPVDKKASLRSPTLHIGVREGHVYRLVLDGPWGDR-----------------RFRRIAEAAPLRR-------GTKKR-------QQTGAAEPSLVSPTP*ARS*TRSSQSGTN------IPLGSAREESTTRPTTRLRTGLRVRLSKN*CSTSTSATSHAGATGTP*PYQHMISLSE-------HGAAQAWADWIRISSNATRLLA*SSCKTPSAESSTAGSWISGRE*VQPVPPGAARGVLEEADRRGRRRIGISYG*EDWQCDIHGAHTAVLISMYTVPAFGYTDDVEEFDDHEIEDWTLYANKVDAV 1716
YR QAVF G+++RI+ S G +RWFNS+P GGDPSLENFQSWA R W R ++HP DA+AWKTAF+ +EGGG GQLVVSAAD TWRAILCW SAGR+I++DHEG AS++NL QLN ASFGH +VRY+ LT FGM WK++ C AVLVA AWRDC + LL +ERRRFGFRDV+P+ G FI T G R K G T NA DGGNYF LF +LL RDVG EF WL+G PA KL+ LEKWL TKA+V VWS R SG VLGP+DKK LR LH+GVREG VYRL LDGPW +R RFRR AEA + G+K A S V P + + + T+ P G+A EE L + L C S+ SH + P +I L HG R+SS ++ L + W RG + A+ G SYG EDWQCDI+GAHTA L+SM VP FG+ D+VEE+ DH+IEDWTLY ++DA+
Sbjct: 2 YRRQAVFGAGYRVRISVSRRGPEYRWFNSHPAGGDPSLENFQSWATRTWRRDLVHPRDADAWKTAFIDVEGGGRGQLVVSAADDTWRAILCWGSAGRRIEIDHEGIPASLSNL--------------QLNIASFGHRVVRYEPLTTFGMTWKKRLPGACLAVLVADAWRDCQLDLLIRERRRFGFRDVNPITGSFINSTGGGRQKGGATTPLRNASDGGNYFQNLFPVLLGRDVGSEEFGMWLAGVSEPPARKLRDLEKWLIKTKANVVVWSYRGSGDHVLGPIDKKTDLRPRGLHVGVREGDVYRLELDGPWCNRFGSSLDVAIEHSVRTQRRFRRTAEAIEEKEEPDTTECGSKAFTCVTDIVSDLMAINKSEVEDGPQQAARKKRKRGKTSEFNMWYAPPGTALEELM----------LHLHLVGVSCRGRLSSYSHWDSLSVPAHVTRLIELHNELGLQFSHGVLD-----FRVSSQYSQSLL----------ALLKVCW---------------RGPIVGAEEVS----GTSYGPEDWQCDINGAHTAALMSMAVVPVFGHVDEVEEYHDHDIEDWTLYKIELDAL 534 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5114.12415.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig5114.12415.1 >prot_H-paniculata_contig5114.12415.1 ID=prot_H-paniculata_contig5114.12415.1|Name=mRNA_H-paniculata_contig5114.12415.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=298bp MIHPGDAEAWKTAFVHIEGGGHGQLVVSAADGTWRAILCWASAGRKIDVDback to top mRNA from alignment at H-paniculata_contig5114:4821..8201+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig5114.12415.1 ID=mRNA_H-paniculata_contig5114.12415.1|Name=mRNA_H-paniculata_contig5114.12415.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3381bp|location=Sequence derived from alignment at H-paniculata_contig5114:4821..8201+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig5114:4821..8201+ >mRNA_H-paniculata_contig5114.12415.1 ID=mRNA_H-paniculata_contig5114.12415.1|Name=mRNA_H-paniculata_contig5114.12415.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1788bp|location=Sequence derived from alignment at H-paniculata_contig5114:4821..8201+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |