mRNA_H-paniculata_contig51124.12414.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig51124.12414.1 vs. uniprot
Match: A0A6H5KB05_9PHAE (UDENN domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB05_9PHAE) HSP 1 Score: 137 bits (345), Expect = 4.820e-36 Identity = 67/71 (94.37%), Postives = 69/71 (97.18%), Query Frame = 1
Query: 1 VLHLFAAVLQEGRILLHSTKPALLAAVAEGVFALMYPLQWPYAYVPVLPSCLIEHVESPQPFILGVHTEWL 213
VL LFAAVLQEGRILLHS KPALLAAVAEGVFALMYPLQWPYAYVPVLP+CLIEHVESPQPFILGVHT+WL
Sbjct: 639 VLELFAAVLQEGRILLHSAKPALLAAVAEGVFALMYPLQWPYAYVPVLPNCLIEHVESPQPFILGVHTDWL 709
BLAST of mRNA_H-paniculata_contig51124.12414.1 vs. uniprot
Match: D8LB83_ECTSI (WD-40 repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB83_ECTSI) HSP 1 Score: 137 bits (344), Expect = 6.580e-36 Identity = 66/71 (92.96%), Postives = 69/71 (97.18%), Query Frame = 1
Query: 1 VLHLFAAVLQEGRILLHSTKPALLAAVAEGVFALMYPLQWPYAYVPVLPSCLIEHVESPQPFILGVHTEWL 213
VL LFAA+LQEGRILLHS KPALLAAVAEGVFALMYPLQWPYAYVPVLP+CLIEHVESPQPFILGVHT+WL
Sbjct: 612 VLELFAAILQEGRILLHSAKPALLAAVAEGVFALMYPLQWPYAYVPVLPNCLIEHVESPQPFILGVHTDWL 682
BLAST of mRNA_H-paniculata_contig51124.12414.1 vs. uniprot
Match: A0A7S2RME7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RME7_9STRA) HSP 1 Score: 79.0 bits (193), Expect = 1.660e-15 Identity = 37/68 (54.41%), Postives = 48/68 (70.59%), Query Frame = 1
Query: 10 LFAAVLQEGRILLHSTKPALLAAVAEGVFALMYPLQWPYAYVPVLPSCLIEHVESPQPFILGVHTEWL 213
L + L E ++L HS A LA V E V LMYPLQW + YVPVLP ++E +ESPQPFI+G+H++WL
Sbjct: 285 LLSYALGERKLLFHSADSAALAPVTEAVCTLMYPLQWIHTYVPVLPRSMLEVLESPQPFIIGIHSDWL 352
BLAST of mRNA_H-paniculata_contig51124.12414.1 vs. uniprot
Match: A0A3B3QJM1_9TELE (SET binding factor 2 n=1 Tax=Paramormyrops kingsleyae TaxID=1676925 RepID=A0A3B3QJM1_9TELE) HSP 1 Score: 74.7 bits (182), Expect = 5.200e-14 Identity = 35/68 (51.47%), Postives = 49/68 (72.06%), Query Frame = 1
Query: 1 VLHLFAAVLQEGRILLHSTKPALLAAVAEGVFALMYPLQWPYAYVPVLPSCLIEHVESPQPFILGVHT 204
VL LF+AVL E R+L HST L+ + +LM+PL++ Y Y+P+LPSCL+E + SP PFI+GVH+
Sbjct: 202 VLSLFSAVLTEHRVLFHSTSSQRLSDACRALESLMFPLKYSYPYIPILPSCLLEMLSSPTPFIIGVHS 269
BLAST of mRNA_H-paniculata_contig51124.12414.1 vs. uniprot
Match: UPI000CD6427B (myotubularin-related protein 13 n=1 Tax=Paramormyrops kingsleyae TaxID=1676925 RepID=UPI000CD6427B) HSP 1 Score: 74.7 bits (182), Expect = 5.200e-14 Identity = 35/68 (51.47%), Postives = 49/68 (72.06%), Query Frame = 1
Query: 1 VLHLFAAVLQEGRILLHSTKPALLAAVAEGVFALMYPLQWPYAYVPVLPSCLIEHVESPQPFILGVHT 204
VL LF+AVL E R+L HST L+ + +LM+PL++ Y Y+P+LPSCL+E + SP PFI+GVH+
Sbjct: 215 VLSLFSAVLTEHRVLFHSTSSQRLSDACRALESLMFPLKYSYPYIPILPSCLLEMLSSPTPFIIGVHS 282
BLAST of mRNA_H-paniculata_contig51124.12414.1 vs. uniprot
Match: A0A024G4E6_9STRA (UDENN domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G4E6_9STRA) HSP 1 Score: 74.3 bits (181), Expect = 7.110e-14 Identity = 32/71 (45.07%), Postives = 51/71 (71.83%), Query Frame = 1
Query: 1 VLHLFAAVLQEGRILLHSTKPALLAAVAEGVFALMYPLQWPYAYVPVLPSCLIEHVESPQPFILGVHTEWL 213
++ + A L E RI++HST A+L VAE + L+YP +W + YVPVLP L++++++P P+ILG+H+ WL
Sbjct: 581 IIDIVALTLLEYRIVIHSTNMAVLCPVAEAICTLLYPFRWQHPYVPVLPRYLLDYLQAPLPYILGLHSSWL 651
BLAST of mRNA_H-paniculata_contig51124.12414.1 vs. uniprot
Match: F0W1U9_9STRA (Uncharacterized protein AlNc14C183G8266 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W1U9_9STRA) HSP 1 Score: 71.6 bits (174), Expect = 6.320e-13 Identity = 30/71 (42.25%), Postives = 51/71 (71.83%), Query Frame = 1
Query: 1 VLHLFAAVLQEGRILLHSTKPALLAAVAEGVFALMYPLQWPYAYVPVLPSCLIEHVESPQPFILGVHTEWL 213
++++ L E RI++HS+ A+L VAE + L+YP +W + YVPVLP L++++++P P+ILG+H+ WL
Sbjct: 608 IINIMTLTLLEYRIVIHSSNMAVLCPVAEALCTLLYPFRWQHPYVPVLPRYLLDYLQAPLPYILGLHSSWL 678
BLAST of mRNA_H-paniculata_contig51124.12414.1 vs. uniprot
Match: T0R7P1_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0R7P1_SAPDV) HSP 1 Score: 69.3 bits (168), Expect = 4.050e-12 Identity = 31/71 (43.66%), Postives = 48/71 (67.61%), Query Frame = 1
Query: 1 VLHLFAAVLQEGRILLHSTKPALLAAVAEGVFALMYPLQWPYAYVPVLPSCLIEHVESPQPFILGVHTEWL 213
++ + +L E RIL+HS+ LL V E + AL+YP W + Y+P+LP LIE++++P PF +GVHT +L
Sbjct: 227 IIFILNCMLLEQRILIHSSHHGLLTPVCEALCALLYPFAWEHVYIPLLPMKLIEYLQAPVPFFMGVHTSYL 297
BLAST of mRNA_H-paniculata_contig51124.12414.1 vs. uniprot
Match: A0A3Q3KJ03_MONAL (SET binding factor 2 n=1 Tax=Monopterus albus TaxID=43700 RepID=A0A3Q3KJ03_MONAL) HSP 1 Score: 69.3 bits (168), Expect = 4.110e-12 Identity = 35/68 (51.47%), Postives = 46/68 (67.65%), Query Frame = 1
Query: 1 VLHLFAAVLQEGRILLHSTKPALLAAVAEGVFALMYPLQWPYAYVPVLPSCLIEHVESPQPFILGVHT 204
VL LF AVL E ++L HST L + ALM+PL++ Y Y+PVLPS L+E + SP PFI+GVH+
Sbjct: 204 VLSLFCAVLTEHKVLFHSTSYQRLGEACRALEALMFPLEYSYPYIPVLPSRLLEVLSSPTPFIIGVHS 271
BLAST of mRNA_H-paniculata_contig51124.12414.1 vs. uniprot
Match: UPI0009B4D98A (myotubularin-related protein 13 isoform X1 n=2 Tax=Monopterus albus TaxID=43700 RepID=UPI0009B4D98A) HSP 1 Score: 69.3 bits (168), Expect = 4.110e-12 Identity = 35/68 (51.47%), Postives = 46/68 (67.65%), Query Frame = 1
Query: 1 VLHLFAAVLQEGRILLHSTKPALLAAVAEGVFALMYPLQWPYAYVPVLPSCLIEHVESPQPFILGVHT 204
VL LF AVL E ++L HST L + ALM+PL++ Y Y+PVLPS L+E + SP PFI+GVH+
Sbjct: 212 VLSLFCAVLTEHKVLFHSTSYQRLGEACRALEALMFPLEYSYPYIPVLPSRLLEVLSSPTPFIIGVHS 279 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig51124.12414.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig51124.12414.1 >prot_H-paniculata_contig51124.12414.1 ID=prot_H-paniculata_contig51124.12414.1|Name=mRNA_H-paniculata_contig51124.12414.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=71bp VLHLFAAVLQEGRILLHSTKPALLAAVAEGVFALMYPLQWPYAYVPVLPSback to top mRNA from alignment at H-paniculata_contig51124:353..914+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig51124.12414.1 ID=mRNA_H-paniculata_contig51124.12414.1|Name=mRNA_H-paniculata_contig51124.12414.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=562bp|location=Sequence derived from alignment at H-paniculata_contig51124:353..914+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig51124:353..914+ >mRNA_H-paniculata_contig51124.12414.1 ID=mRNA_H-paniculata_contig51124.12414.1|Name=mRNA_H-paniculata_contig51124.12414.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=426bp|location=Sequence derived from alignment at H-paniculata_contig51124:353..914+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |