mRNA_H-paniculata_contig5108.12405.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig5108.12405.1 vs. uniprot
Match: D8LBI4_ECTSI (Purple acid phosphatase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBI4_ECTSI) HSP 1 Score: 96.3 bits (238), Expect = 1.030e-21 Identity = 45/63 (71.43%), Postives = 52/63 (82.54%), Query Frame = 1
Query: 1 YTSGFLHSATMVNLLPSTTYYYSCGDEALGMSSVRSFVTPPMVGGEQAVTFSVVGDLGQTEDS 189
YTSGFLHSAT+ L PS+TY+YSCGD+ L MSSVRSF TPP VG EQ +T V+GDLGQT+DS
Sbjct: 131 YTSGFLHSATLQGLEPSSTYFYSCGDDTLEMSSVRSFDTPPKVGPEQPITLGVLGDLGQTDDS 193
BLAST of mRNA_H-paniculata_contig5108.12405.1 vs. uniprot
Match: D7FWJ2_ECTSI (Purple acid phosphatase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWJ2_ECTSI) HSP 1 Score: 72.4 bits (176), Expect = 2.570e-13 Identity = 34/63 (53.97%), Postives = 43/63 (68.25%), Query Frame = 1
Query: 1 YTSGFLHSATMVNLLPSTTYYYSCGDEALGMSSVRSFVTPPMVGGEQAVTFSVVGDLGQTEDS 189
YTSG+LHSA + L PSTT +Y GDE L +S+VR F TP + EQ + ++GDLGQT DS
Sbjct: 129 YTSGWLHSAVIQGLEPSTTIFYCVGDEDLALSTVRDFTTPGVFAPEQPLVLGILGDLGQTNDS 191
BLAST of mRNA_H-paniculata_contig5108.12405.1 vs. uniprot
Match: A0A6A3MEB4_9STRA (Purple acid phosphatase n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3MEB4_9STRA) HSP 1 Score: 69.7 bits (169), Expect = 2.280e-12 Identity = 38/66 (57.58%), Postives = 42/66 (63.64%), Query Frame = 1
Query: 1 YTSGFLHSATMVN--LLPSTTYYYSCGDEALGMSSVRSFVTPPMVGGEQAVTFSVVGDLGQTEDSE 192
Y S +LH T+ L P TTYYY CGDEA G S+V SF T VG E TF V+GDLGQTE SE
Sbjct: 179 YKSPWLHHVTIPGDKLSPDTTYYYQCGDEAGGWSTVYSFKTAVPVGSEAPQTFGVIGDLGQTEYSE 244
BLAST of mRNA_H-paniculata_contig5108.12405.1 vs. uniprot
Match: A0A3F2S309_9STRA (Purple acid phosphatase n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2S309_9STRA) HSP 1 Score: 68.2 bits (165), Expect = 7.550e-12 Identity = 36/66 (54.55%), Postives = 42/66 (63.64%), Query Frame = 1
Query: 1 YTSGFLHSATMVN--LLPSTTYYYSCGDEALGMSSVRSFVTPPMVGGEQAVTFSVVGDLGQTEDSE 192
YTS + H T+ LLP TTYYY CGD+A G S V +F T VG +TF V+GDLGQTE SE
Sbjct: 64 YTSPWFHHVTIPGDKLLPDTTYYYQCGDDAGGWSDVYTFKTVVPVGSVAPLTFGVIGDLGQTEYSE 129
BLAST of mRNA_H-paniculata_contig5108.12405.1 vs. uniprot
Match: D0MQE1_PHYIT (Purple acid phosphatase n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0MQE1_PHYIT) HSP 1 Score: 67.8 bits (164), Expect = 1.070e-11 Identity = 36/66 (54.55%), Postives = 43/66 (65.15%), Query Frame = 1
Query: 1 YTSGFLHSATMVN--LLPSTTYYYSCGDEALGMSSVRSFVTPPMVGGEQAVTFSVVGDLGQTEDSE 192
YTS +LH T+ L P+T YYY CGDE G S+V +F T VG E + TF V+GDLGQTE SE
Sbjct: 119 YTSPWLHHVTIPGDKLEPNTNYYYQCGDETGGWSTVYTFKTAIPVGNETSQTFGVIGDLGQTEYSE 184
BLAST of mRNA_H-paniculata_contig5108.12405.1 vs. uniprot
Match: A0A329SIR5_9STRA (Purple acid phosphatase n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329SIR5_9STRA) HSP 1 Score: 67.8 bits (164), Expect = 1.090e-11 Identity = 37/66 (56.06%), Postives = 42/66 (63.64%), Query Frame = 1
Query: 1 YTSGFLHSATMVN--LLPSTTYYYSCGDEALGMSSVRSFVTPPMVGGEQAVTFSVVGDLGQTEDSE 192
YTS +LH T+ L P+T YYY CGDE G S+V SF T VG E TF V+GDLGQTE SE
Sbjct: 179 YTSPWLHHVTIPGDKLEPNTDYYYQCGDEIGGWSTVYSFKTAVPVGSEAPQTFGVIGDLGQTEYSE 244
BLAST of mRNA_H-paniculata_contig5108.12405.1 vs. uniprot
Match: A0A7S1SRS7_9CHLO (Purple acid phosphatase n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1SRS7_9CHLO) HSP 1 Score: 66.6 bits (161), Expect = 2.790e-11 Identity = 29/58 (50.00%), Postives = 39/58 (67.24%), Query Frame = 1
Query: 10 GFLHSATMVNLLPSTTYYYSCGDEALGMSSVRSFVTPPMVGGEQAVTFSVVGDLGQTE 183
G +H+AT+ +L P T Y+Y GD+ LG+S +RSFVTPP VG + V V D+GQ E
Sbjct: 254 GMMHAATLTDLQPDTRYFYQHGDQKLGLSPIRSFVTPPRVGPDSEVRLLHVADMGQAE 311
BLAST of mRNA_H-paniculata_contig5108.12405.1 vs. uniprot
Match: A0A5D6YDX0_9STRA (Purple acid phosphatase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YDX0_9STRA) HSP 1 Score: 64.3 bits (155), Expect = 1.840e-10 Identity = 32/66 (48.48%), Postives = 41/66 (62.12%), Query Frame = 1
Query: 1 YTSGFLHSATM--VNLLPSTTYYYSCGDEALGMSSVRSFVTPPMVGGEQAVTFSVVGDLGQTEDSE 192
YTS + H + LLPSTTY+Y CGD G S V SF T G + ++F+V+GDLGQT+ SE
Sbjct: 591 YTSPWFHHVLIDGERLLPSTTYFYQCGDPDAGWSKVLSFTTALAAGSHEPISFAVIGDLGQTKFSE 656
BLAST of mRNA_H-paniculata_contig5108.12405.1 vs. uniprot
Match: A0A7S0XUC5_HEMAN (Hypothetical protein (Fragment) n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0XUC5_HEMAN) HSP 1 Score: 63.2 bits (152), Expect = 3.360e-10 Identity = 36/67 (53.73%), Postives = 45/67 (67.16%), Query Frame = 1
Query: 1 YTSGFLHSATMVNLLPSTTYYYSCGD-EALGMSSVR--SFVTPPMVGGEQAVTFSVVGDLGQTEDSE 192
YTS +LH + L STTYYY+ GD A S+R S T P VGG+Q++TF+V+GDLGQTE SE
Sbjct: 148 YTSPYLHHVKLRGLNASTTYYYAVGDASAATTGSLRELSVRTLPAVGGKQSLTFTVIGDLGQTEFSE 214
BLAST of mRNA_H-paniculata_contig5108.12405.1 vs. uniprot
Match: A0A3M6VV49_9STRA (Purple acid phosphatase n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VV49_9STRA) HSP 1 Score: 63.5 bits (153), Expect = 3.360e-10 Identity = 33/62 (53.23%), Postives = 40/62 (64.52%), Query Frame = 1
Query: 1 YTSGFLHSATMVN--LLPSTTYYYSCGDEALGMSSVRSFVTPPMVGGEQAVTFSVVGDLGQT 180
Y S +LH T+ L P TTY+Y CGDE G S+V SF T +VG E+ TF V+GDLGQT
Sbjct: 129 YKSPWLHHVTIPGDKLKPDTTYFYQCGDEIGGWSTVYSFKTAVIVGDERPQTFGVIGDLGQT 190 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5108.12405.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig5108.12405.1 >prot_H-paniculata_contig5108.12405.1 ID=prot_H-paniculata_contig5108.12405.1|Name=mRNA_H-paniculata_contig5108.12405.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=55bp MVNLLPSTTYYYSCGDEALGMSSVRSFVTPPMVGGEQAVTFSVVGDLGQTback to top mRNA from alignment at H-paniculata_contig5108:357..551- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig5108.12405.1 ID=mRNA_H-paniculata_contig5108.12405.1|Name=mRNA_H-paniculata_contig5108.12405.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=195bp|location=Sequence derived from alignment at H-paniculata_contig5108:357..551- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig5108:357..551- >mRNA_H-paniculata_contig5108.12405.1 ID=mRNA_H-paniculata_contig5108.12405.1|Name=mRNA_H-paniculata_contig5108.12405.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=330bp|location=Sequence derived from alignment at H-paniculata_contig5108:357..551- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |