mRNA_H-paniculata_contig51048.12402.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig51048.12402.1 vs. uniprot
Match: A0A8F0F757_9PHAE (Ferredoxin-thioredoxin reductase, catalytic chain n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0F757_9PHAE) HSP 1 Score: 208 bits (529), Expect = 9.350e-68 Identity = 97/112 (86.61%), Postives = 103/112 (91.96%), Query Frame = 1
Query: 1 NLMHSLESMHKFAQIYAKQTNTFFCLDPSITSVVITGCITGLANYKTKYGVPLCPFRNYHNEEDEIDLNYWICPCVAMRERKECHCKLFLTSDQKFVSQKQEIDIETIYKNL 336
NL+ SLESMHKFAQ Y KQTNTFFCLDP+ITSVVITG LANYK+KYGVPLCP RNYHNE+DEIDLNYWICPCVAMRERKECHCKLFLT DQKFVS+KQEIDIET+YKNL
Sbjct: 12 NLLQSLESMHKFAQNYTKQTNTFFCLDPAITSVVITG----LANYKSKYGVPLCPCRNYHNEKDEIDLNYWICPCVAMRERKECHCKLFLTPDQKFVSEKQEIDIETVYKNL 119
BLAST of mRNA_H-paniculata_contig51048.12402.1 vs. uniprot
Match: A0A8F0FAQ0_9PHAE (Ferredoxin-thioredoxin reductase, catalytic chain n=1 Tax=Desmarestia aculeata TaxID=62298 RepID=A0A8F0FAQ0_9PHAE) HSP 1 Score: 175 bits (443), Expect = 1.070e-54 Identity = 79/112 (70.54%), Postives = 91/112 (81.25%), Query Frame = 1
Query: 1 NLMHSLESMHKFAQIYAKQTNTFFCLDPSITSVVITGCITGLANYKTKYGVPLCPFRNYHNEEDEIDLNYWICPCVAMRERKECHCKLFLTSDQKFVSQKQEIDIETIYKNL 336
N + +MHKFA+ YAKQTNTFFC DPSITS+VITG LA YK KYGVPLCP RNY+NEE EI+LNYWICPCVAMRERKECHCKLF+ D ++VS+ Q+IDI+ IY NL
Sbjct: 8 NFYDCVNAMHKFAETYAKQTNTFFCFDPSITSIVITG----LATYKDKYGVPLCPCRNYYNEEAEIELNYWICPCVAMRERKECHCKLFINPDDEYVSENQKIDIDIIYNNL 115
BLAST of mRNA_H-paniculata_contig51048.12402.1 vs. uniprot
Match: A0A2I4Q2F8_9PHAE (Ferredoxin-thioredoxin reductase, catalytic chain n=1 Tax=Dictyopteris divaricata TaxID=156996 RepID=A0A2I4Q2F8_9PHAE) HSP 1 Score: 167 bits (423), Expect = 1.190e-51 Identity = 75/112 (66.96%), Postives = 90/112 (80.36%), Query Frame = 1
Query: 1 NLMHSLESMHKFAQIYAKQTNTFFCLDPSITSVVITGCITGLANYKTKYGVPLCPFRNYHNEEDEIDLNYWICPCVAMRERKECHCKLFLTSDQKFVSQKQEIDIETIYKNL 336
N+ +S+ES+ +FA+IY K+TNTFFC DPSIT++V+TG L +K KYGVPLCP RNY NEE E+DLNYWICPCVAMRERKECHCKLFLT D ++ S+ Q IDI IY NL
Sbjct: 8 NISNSVESIQRFAEIYTKRTNTFFCFDPSITAIVLTG----LVRHKEKYGVPLCPCRNYFNEEAEVDLNYWICPCVAMRERKECHCKLFLTPDDEYSSKNQTIDINLIYDNL 115
BLAST of mRNA_H-paniculata_contig51048.12402.1 vs. uniprot
Match: A0A0S0GLW6_COSCS (Ferredoxin-thioredoxin reductase, catalytic chain n=28 Tax=Laminariales TaxID=2886 RepID=A0A0S0GLW6_COSCS) HSP 1 Score: 164 bits (414), Expect = 2.800e-50 Identity = 73/112 (65.18%), Postives = 90/112 (80.36%), Query Frame = 1
Query: 1 NLMHSLESMHKFAQIYAKQTNTFFCLDPSITSVVITGCITGLANYKTKYGVPLCPFRNYHNEEDEIDLNYWICPCVAMRERKECHCKLFLTSDQKFVSQKQEIDIETIYKNL 336
N + L+ MH FA+IYAKQTNTFFCLDPSITSV+ITG LA YK +YGVPLCP RN+ +E+ EI+LNYW+CPCV+MRERKECHCKLF+ + S+ Q+I ++TIYKNL
Sbjct: 8 NFYNRLKEMHNFAEIYAKQTNTFFCLDPSITSVIITG----LATYKDQYGVPLCPCRNFRSEKAEIELNYWVCPCVSMRERKECHCKLFVQPNDSSASETQKISLDTIYKNL 115
BLAST of mRNA_H-paniculata_contig51048.12402.1 vs. uniprot
Match: A0A2R4QPY4_9PHAE (Ferredoxin-thioredoxin reductase, catalytic chain n=3 Tax=Fucaceae TaxID=3010 RepID=A0A2R4QPY4_9PHAE) HSP 1 Score: 163 bits (413), Expect = 3.980e-50 Identity = 72/108 (66.67%), Postives = 89/108 (82.41%), Query Frame = 1
Query: 13 SLESMHKFAQIYAKQTNTFFCLDPSITSVVITGCITGLANYKTKYGVPLCPFRNYHNEEDEIDLNYWICPCVAMRERKECHCKLFLTSDQKFVSQKQEIDIETIYKNL 336
S+++M FA+ YAKQTNTFF +DPSITS++ITG LANYK +Y VPLCP RNYHNEE EI+LNYWICPCV+MRERKECHC+LF+ + + SQ Q+I ++TIYKNL
Sbjct: 12 SIKAMQHFAETYAKQTNTFFSIDPSITSIIITG----LANYKDRYKVPLCPCRNYHNEEAEIELNYWICPCVSMRERKECHCRLFVQPTESYASQSQKISLDTIYKNL 115
BLAST of mRNA_H-paniculata_contig51048.12402.1 vs. uniprot
Match: A0A141BSI2_9PHAE (Ferredoxin-thioredoxin reductase, catalytic chain n=13 Tax=Sargassaceae TaxID=3014 RepID=A0A141BSI2_9PHAE) HSP 1 Score: 159 bits (401), Expect = 2.680e-48 Identity = 69/107 (64.49%), Postives = 88/107 (82.24%), Query Frame = 1
Query: 16 LESMHKFAQIYAKQTNTFFCLDPSITSVVITGCITGLANYKTKYGVPLCPFRNYHNEEDEIDLNYWICPCVAMRERKECHCKLFLTSDQKFVSQKQEIDIETIYKNL 336
+++M +FA+ YAKQTNTFF LDPSITS++ITG LA YK ++ VPLCP RNYHNEE EI+LNYWICPC++MRERKECHCKLF+ + + S+ Q+ID++TIY NL
Sbjct: 13 IKAMQQFAETYAKQTNTFFSLDPSITSIIITG----LATYKDRHKVPLCPCRNYHNEEAEIELNYWICPCISMRERKECHCKLFVQPTESYASKSQKIDLDTIYNNL 115
BLAST of mRNA_H-paniculata_contig51048.12402.1 vs. uniprot
Match: A0A8F0JXX6_9PHAE (Ferredoxin-thioredoxin reductase, catalytic chain n=1 Tax=Pseudochorda nagaii TaxID=74379 RepID=A0A8F0JXX6_9PHAE) HSP 1 Score: 159 bits (401), Expect = 2.680e-48 Identity = 71/107 (66.36%), Postives = 87/107 (81.31%), Query Frame = 1
Query: 16 LESMHKFAQIYAKQTNTFFCLDPSITSVVITGCITGLANYKTKYGVPLCPFRNYHNEEDEIDLNYWICPCVAMRERKECHCKLFLTSDQKFVSQKQEIDIETIYKNL 336
L+ MH FAQIYAKQTNTFFCLDPSITSV+ITG LA YK K+GVPLCP RN+ +E+ EI+LNYW+CPCV+MRERKECHCKLF+ + S+ Q+I ++TIY+ L
Sbjct: 13 LKEMHTFAQIYAKQTNTFFCLDPSITSVIITG----LATYKDKHGVPLCPCRNFRSEKAEIELNYWVCPCVSMRERKECHCKLFVQPNDSSASKSQKISLDTIYETL 115
BLAST of mRNA_H-paniculata_contig51048.12402.1 vs. uniprot
Match: A0A8E6D4Y1_9PHAE (Ferredoxin-thioredoxin reductase beta subunit n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A8E6D4Y1_9PHAE) HSP 1 Score: 159 bits (401), Expect = 3.230e-48 Identity = 71/108 (65.74%), Postives = 86/108 (79.63%), Query Frame = 1
Query: 13 SLESMHKFAQIYAKQTNTFFCLDPSITSVVITGCITGLANYKTKYGVPLCPFRNYHNEEDEIDLNYWICPCVAMRERKECHCKLFLTSDQKFVSQKQEIDIETIYKNL 336
SL++MHKFA+ YAK+TNTFFC+DPS+T VVI G L+ YK KYG+PLCP RNY NEE E+D YW+CPCVAMRER+ECHCKLFLTSD + S QEID++ + K L
Sbjct: 18 SLKAMHKFAETYAKKTNTFFCVDPSVTCVVIKG----LSVYKEKYGLPLCPCRNYENEEAELDSTYWLCPCVAMRERRECHCKLFLTSDDREASHNQEIDLQGVLKTL 121
BLAST of mRNA_H-paniculata_contig51048.12402.1 vs. uniprot
Match: A0A1I9LVX2_9PHAE (Ferredoxin-thioredoxin reductase, catalytic chain n=1 Tax=Pleurocladia lacustris TaxID=246121 RepID=A0A1I9LVX2_9PHAE) HSP 1 Score: 153 bits (387), Expect = 5.620e-46 Identity = 68/107 (63.55%), Postives = 84/107 (78.50%), Query Frame = 1
Query: 16 LESMHKFAQIYAKQTNTFFCLDPSITSVVITGCITGLANYKTKYGVPLCPFRNYHNEEDEIDLNYWICPCVAMRERKECHCKLFLTSDQKFVSQKQEIDIETIYKNL 336
L+ MH FA++YAK+TNTFFCLDPSITSV+I G LA+YK KY +PLCP RN+ +E EI+LN+WICPCVAMRERKECHCKLF+ + SQ Q+I + T+Y NL
Sbjct: 21 LKEMHNFAELYAKKTNTFFCLDPSITSVIIAG----LADYKNKYKLPLCPCRNFRSERVEIELNFWICPCVAMRERKECHCKLFVRPEDSEASQTQKISLSTVYNNL 123
BLAST of mRNA_H-paniculata_contig51048.12402.1 vs. uniprot
Match: A0A6B7EW12_9PHAE (Ferredoxin:thioredoxin reductase n=1 Tax=Cladosiphon okamuranus TaxID=309737 RepID=A0A6B7EW12_9PHAE) HSP 1 Score: 150 bits (380), Expect = 6.340e-45 Identity = 66/107 (61.68%), Postives = 84/107 (78.50%), Query Frame = 1
Query: 16 LESMHKFAQIYAKQTNTFFCLDPSITSVVITGCITGLANYKTKYGVPLCPFRNYHNEEDEIDLNYWICPCVAMRERKECHCKLFLTSDQKFVSQKQEIDIETIYKNL 336
++ MH F+++YA++TNTFFCLDPSITSV+I G LA+YK KY +PLCP RN+ +E EI+LN+WICPCVAMRERKECHCKLF+ D SQ Q+I + T+Y NL
Sbjct: 20 IKEMHTFSELYAQKTNTFFCLDPSITSVIIAG----LADYKEKYALPLCPCRNFRSERVEIELNFWICPCVAMRERKECHCKLFVRPDDSNASQTQKIPLSTVYHNL 122 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig51048.12402.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig51048.12402.1 >prot_H-paniculata_contig51048.12402.1 ID=prot_H-paniculata_contig51048.12402.1|Name=mRNA_H-paniculata_contig51048.12402.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=111bp MHSLESMHKFAQIYAKQTNTFFCLDPSITSVVITGCITGLANYKTKYGVPback to top mRNA from alignment at H-paniculata_contig51048:875..1213- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig51048.12402.1 ID=mRNA_H-paniculata_contig51048.12402.1|Name=mRNA_H-paniculata_contig51048.12402.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=339bp|location=Sequence derived from alignment at H-paniculata_contig51048:875..1213- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig51048:875..1213- >mRNA_H-paniculata_contig51048.12402.1 ID=mRNA_H-paniculata_contig51048.12402.1|Name=mRNA_H-paniculata_contig51048.12402.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=666bp|location=Sequence derived from alignment at H-paniculata_contig51048:875..1213- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |