mRNA_H-paniculata_contig1195.1240.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig1195.1240.1 vs. uniprot
Match: D7FX05_ECTSI (Methylmalonate-semialdehyde dehydrogenase (CoA acylating) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX05_ECTSI) HSP 1 Score: 480 bits (1235), Expect = 1.200e-165 Identity = 252/321 (78.50%), Postives = 276/321 (85.98%), Query Frame = 1 Query: 1 VPPGVFQIVNGGRDAAEALCDSEGVKALTFVGSSHVAKSVASRCHAAGNKRVLALGGAENHLVALPDCEHESAAHDIVASFAGCAGQRCMAASVLVLVGDSGDLLEKVVAKAKALCPGTAPGNVGPVISTASRDHIVECISKAVSPDGGSGELLLDGRQWAERRPGTWVGPTVILLKRRDK--EALSEEIFGPVLMVVKVDTWQEALQVENASPYGNAASVYTSSGAAADFFQTRFRAGMIGVNVGIPVPREPFAFGGLSGTLSKYGDFDVTAEGAMEFFTNKRKITTKWVMPEGAATTAGG-----GGAKMDTANFVGQM 942 +PPGVFQIVNGG++AAEALCD+E VKALTFVGSS VAKSVA+RCHA NKRVLALGGAENHL+ALPDC+HE+AAHDIVASFAGCAGQRCMAASVLVLVGD+GDLL++V+ K+KAL PGT G VGPVISTASRDHIV I A + GE+++DGR WAERRPGTWVGPTVI+ R + SEEIFGPVLMVVKVDTWQEAL VENASP+GNAASVYTSSG AAD+FQTRFRAGMIGVNVGIPVPREPFAFGGLSGTLSKYGDFDVTAEGAMEFFTN+RKITTKW +P+ A TA G K DTANFVGQM Sbjct: 210 LPPGVFQIVNGGKEAAEALCDAEAVKALTFVGSSGVAKSVAARCHAV-NKRVLALGGAENHLIALPDCDHEAAAHDIVASFAGCAGQRCMAASVLVLVGDTGDLLDRVIQKSKALEPGTEAGKVGPVISTASRDHIVGRIGAA---EAEGGEVVVDGRGWAERRPGTWVGPTVIVKSRNGNKGDGKSEEIFGPVLMVVKVDTWQEALAVENASPFGNAASVYTSSGPAADYFQTRFRAGMIGVNVGIPVPREPFAFGGLSGTLSKYGDFDVTAEGAMEFFTNRRKITTKWALPKEATMTAAXXXXXXAGGKTDTANFVGQM 526
BLAST of mRNA_H-paniculata_contig1195.1240.1 vs. uniprot
Match: A0A7S3XZ64_HETAK (Methylmalonate-semialdehyde dehydrogenase (CoA acylating) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XZ64_HETAK) HSP 1 Score: 393 bits (1010), Expect = 7.860e-132 Identity = 200/314 (63.69%), Postives = 253/314 (80.57%), Query Frame = 1 Query: 1 VPPGVFQIVNGGRDAAEALCDSEGVKALTFVGSSHVAKSVASRCHAAGNKRVLALGGAENHLVALPDCEHESAAHDIVASFAGCAGQRCMAASVLVLVGDSGDLLEKVVAKAKALCPGTAPGNVGPVISTASRDHIVECISKAVSPDGGSGELLLDGRQWAERRPGTWVGPTVILLKRRDKEALSEEIFGPVLMVVKVDTWQEALQVENASPYGNAASVYTSSGAAADFFQTRFRAGMIGVNVGIPVPREPFAFGGLSGTLSKYGDFDVTAEGAMEFFTNKRKITTKWVMPEGAATTAGGGGAKMDTANFVGQM 942 VP GVFQ+V G +AA AL D GV+ALTFVGSS VA+ +A RC NKRVLALGGA+NHLVALPDC+ E+AA DIVASFAGCAGQRCMAASVL+LVGD+GDLL++VVA+A AL PGT PG VGPVI A++ +++ + +AV+ DG E L+DGR WA+R PGTWVGPTV+ +++ AL++EIFGPVL V++VD+W+EAL++ENASP+GNAASVYTSSGA+A++F +RFRAGM+GVN+GIPVPREPF+FGGL GT SK+GD D+T +GAM FFT++RK+TTKWV+ + + D ANF GQ+ Sbjct: 207 VPDGVFQMVQGTAEAAAALADHPGVRALTFVGSSPVAELLAKRCRGL-NKRVLALGGAKNHLVALPDCDRETAAGDIVASFAGCAGQRCMAASVLLLVGDTGDLLDRVVARAAALRPGTDPGQVGPVIDAAAKARVLKYVDEAVTRDGA--EPLVDGRAWADRSPGTWVGPTVLRHQKKGDPALTDEIFGPVLSVLRVDSWEEALEIENASPFGNAASVYTSSGASAEWFTSRFRAGMLGVNIGIPVPREPFSFGGLYGTRSKFGDMDITGDGAMAFFTDRRKVTTKWVLTQDSK----------DKANFAGQL 507
BLAST of mRNA_H-paniculata_contig1195.1240.1 vs. uniprot
Match: A0A6H5JBQ6_9PHAE (Methylmalonate-semialdehyde dehydrogenase (CoA acylating) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBQ6_9PHAE) HSP 1 Score: 365 bits (936), Expect = 2.570e-120 Identity = 199/286 (69.58%), Postives = 217/286 (75.87%), Query Frame = 1 Query: 1 VPPGVFQIVNGGRDAAEALCDSEGVKALTFVGSSHVAKSVASRCHAAGNKRVLALGGAENHLVALPDCEHESAAHDIVASFAGCAGQRCMAASVLVLVGDSGDLLEKVVAKAKALCPGTAPGNVGPVISTASRDHIVECISKAVSPDGGSGELLLDGRQWAERRPGTWVGPTVILLKRRDK--EALSEEIFGPVLMVVKVDTWQEALQVENASPYGNAASVYTSSGAAADFFQTRFRAGMIGVNVGIPVPREPFAFGGLSGTLSKYGDFDVTAEGAMEFFTNKRKI 852 +PPGVFQIVNGGR+AAEALCD+E VKALTFVGSS VAKSVA+RCHA NKRVLALGGAENHL+ALPDCE V+ K+KAL PGT G VGPVISTASRDHIV I A + GE+L+DGR W+ER+PGTWVGPTVI+ R + SEEIFGPVLMVVKVDTWQEAL VENASP+GNAASVYTSSG AAD+FQTRFRAGMIGVNVGIPVPREPFAFGGLSGTLSKYGDFDVTAEGAMEFFTN+RK+ Sbjct: 282 LPPGVFQIVNGGREAAEALCDAEAVKALTFVGSSGVAKSVAARCHAV-NKRVLALGGAENHLIALPDCE--------------------------------------VIQKSKALEPGTEAGKVGPVISTASRDHIVGRIGAA---EANGGEVLVDGRGWSERKPGTWVGPTVIVKSRNGNKGDGKSEEIFGPVLMVVKVDTWQEALAVENASPFGNAASVYTSSGPAADYFQTRFRAGMIGVNVGIPVPREPFAFGGLSGTLSKYGDFDVTAEGAMEFFTNRRKV 525
BLAST of mRNA_H-paniculata_contig1195.1240.1 vs. uniprot
Match: A0A7R9YBR4_9STRA (Methylmalonate-semialdehyde dehydrogenase (CoA acylating) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YBR4_9STRA) HSP 1 Score: 358 bits (918), Expect = 9.040e-119 Identity = 185/325 (56.92%), Postives = 240/325 (73.85%), Query Frame = 1 Query: 1 VPPGVFQIVNGGRDAAEALCDSEGVKALTFVGSSHVAKSVASRCHAAGNKRVLALGGAENHLVALPDCEHESAAHDIVASFAGCAGQRCMAASVLVLVGDSGDLLEKVVAKAKALCPGTAPGNVGPVISTASRDHIVECISKAVSPDGGSGELLLDGRQWAERRPGTWVGPTVILLKRRDKEALSEEIFGPVLMVVKVDTWQEALQVENASPYGNAASVYTSSGAAADFFQTRFRAGMIGVNVGIPVPREPFAFGGLSGTLSKYGDFDVTAEGAMEFFTNKRKITTKWVMPEGAATTAG-----------GGGAKMDTANFVGQM 942 VP G+FQ+V+G R A EALCD + A+TFVGSS +A++V+ RC A NKR LALGGA+NHLVAL DC+HE AA DIVAS GCAGQRCMAASVL+LVGD+GDLLE++ KA AL G PG VG +++ SRD + + +A + +LL+DGR A R PGTW GPTV++L+ + E L +EIFGPVL V++V +W+EA+++EN +PYGNAA +YTS+GA A++F RFRAGM+GVN+G+PVPREPF+FGG+ GT SKYGD D+TA+GA+EFFT+++KIT K+ P A AG G A +D ANFVG+M Sbjct: 125 VPRGIFQLVHGTRPAVEALCDHPEIAAVTFVGSSPIAEAVSKRCRAL-NKRCLALGGAKNHLVALDDCDHEMAARDIVASAYGCAGQRCMAASVLLLVGDTGDLLERICNKATALELGVQPGQVGAILTPESRDRMKGYVDRA---EAAGAKLLVDGRPSAARTPGTWFGPTVVVLEDKANECLHDEIFGPVLSVLRVSSWEEAIEIENGNPYGNAACIYTSNGANAEWFTERFRAGMLGVNIGVPVPREPFSFGGMYGTASKYGDMDITADGALEFFTDRQKITAKFGAPRRALDAAGELAAKRRRIDNGHNATVDEANFVGKM 445
BLAST of mRNA_H-paniculata_contig1195.1240.1 vs. uniprot
Match: K8YV85_NANGC (Methylmalonate-semialdehyde dehydrogenase (CoA acylating) (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YV85_NANGC) HSP 1 Score: 352 bits (903), Expect = 1.570e-116 Identity = 196/334 (58.68%), Postives = 235/334 (70.36%), Query Frame = 1 Query: 1 VPPGVFQIVNGGRDAAEALCDSEGVKALTFVGSSHVAKSVASRCHAAGNKRVLALGGAENHLVALPDCEHESAAHDIVASFAGCAGQRCMAASVLVLVGDSGDLLEKVVAKAKALCPGTAPGNVGPVISTASRDHIVECISKAVSPDGGSGELLLDGRQWAER-RPGTWVGPTVILLKRRDKEALSEEIFGPVLMVVKVDTWQEALQVENASPYGNAASVYTSSGAAADFFQTRFRAGMIGVNVGIPVPREPFAFGGLSGTLSKYGDF-DVTAEGAMEFFTNKRKITTKWVMPEGAATTAGG-------GGAKM-----------DTANFVGQM 942 VPPGVFQ VNG +A AL D V+ +TFVGSS VA+ VA R NKRVLA+GGA+NHLVALPDC ESA+ DIVASFAGCAGQRCMAA+VL+L+G+ LLE V+ KA AL PG PG VG +I S++ I+ I +A + LLLDGR WA+ + GTWVGPT++L R D EA+ EEIFGPVL V++V TW+EAL +E ++P+GNAA VYT+ GA A FF+TRFRAGMIGVNVG+PVPREPF+FGGL GT SKYG D+T EG +EF TNKRKIT+KW PEG + AGG GG K D A+FVG M Sbjct: 114 VPPGVFQTVNGQVEAVNALIDHPLVRGVTFVGSSRVAEVVAERASRL-NKRVLAMGGAKNHLVALPDCHVESASSDIVASFAGCAGQRCMAATVLILIGEQASLLEAVIRKAGALTPGVEPGQVGAIIDAISQERILRYIDEA---EKQGVTLLLDGRGWAQAAKAGTWVGPTILLHTRADDEAMREEIFGPVLSVIRVATWEEALAIEASNPHGNAACVYTTVGAHAQFFETRFRAGMIGVNVGVPVPREPFSFGGLFGTRSKYGSMVDITGEGCLEFMTNKRKITSKWAFPEGESNGAGGRAAPLAEGGKKELDQGVRQAHAPDRASFVGAM 443
BLAST of mRNA_H-paniculata_contig1195.1240.1 vs. uniprot
Match: A0A8K1CAX5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CAX5_PYTOL) HSP 1 Score: 351 bits (900), Expect = 3.560e-115 Identity = 191/314 (60.83%), Postives = 227/314 (72.29%), Query Frame = 1 Query: 1 VPPGVFQIVNGGRDAAEALCDSEGVKALTFVGSSHVAKSVASRCHAAGNKRVLALGGAENHLVALPDCEHESAAHDIVASFAGCAGQRCMAASVLVLVGDSGDLLEKVVAKAKALCPGTAPGNVGPVISTASRDHIVECISKAVSPDGGSGELLLDGRQWAERRPGTWVGPTVILLKRRDKEALSEEIFGPVLMVVKVDTWQEALQVENASPYGNAASVYTSSGAAADFFQTRFRAGMIGVNVGIPVPREPFAFGGLSGTLSKYGDFDVTAEGAMEFFTNKRKITTKWVMPEGAATTAGGGGAKMDTANFVGQM 942 VPPGVFQ+VNG DA LCD V ALTFVGSS VA+ VA RC A +KRVLALGGA+NHLVALPD ++E AA DIVASFAGCAGQRCMAASVL+LVGD DLL V+ K+K L GT G VG +I ASRD I++ I++A + G ++L+DGR WA G WVGPTV+L + AL +EIFGPVL V V + ++AL +EN + YGNAASVYTS+GA A++FQTRFRA MIGVNVGIPVPREPF+FGGL GT SKYGD D+T +GA+EFF+ +RKITTKW A D ANF Q+ Sbjct: 211 VPPGVFQVVNGKEDAVTRLCDHPDVSALTFVGSSRVAQLVARRCRAL-DKRVLALGGAKNHLVALPDADNEMAAKDIVASFAGCAGQRCMAASVLLLVGDCSDLLSLVIEKSKQLTRGTNAGQVGAIIDAASRDRILKYINEA---EQGGAKVLVDGRAWATEGQGFWVGPTVLLHASAEDAALHDEIFGPVLSVYPVGSMEDALAIENHNDYGNAASVYTSNGATAEYFQTRFRAAMIGVNVGIPVPREPFSFGGLYGTKSKYGDMDITGDGAIEFFSQRRKITTKWSAVTNLA----------DKANFSAQI 510
BLAST of mRNA_H-paniculata_contig1195.1240.1 vs. uniprot
Match: A0A836CA02_9STRA (Methylmalonate-semialdehyde dehydrogenase (CoA acylating) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CA02_9STRA) HSP 1 Score: 349 bits (895), Expect = 2.020e-114 Identity = 179/288 (62.15%), Postives = 219/288 (76.04%), Query Frame = 1 Query: 1 VPPGVFQIVNGGRDAAEALCDSEGVKALTFVGSSHVAKSVASRCHAAGNKRVLALGGAENHLVALPDCEHESAAHDIVASFAGCAGQRCMAASVLVLVGDSGDLLEKVVAKAKALCPGTAPGNVGPVISTASRDHIVECISKAVSPDGGSGELLLDGRQWAERRPGTWVGPTVILLKRRDKEALSEEIFGPVLMVVKVDTWQEALQVENASPYGNAASVYTSSGAAADFFQTRFRAGMIGVNVGIPVPREPFAFGGLSGTLSKYGDFDVTAEGAMEFFTNKRKITTKW 864 VP G FQ+VNG ALCD G+ AL+FVGSSHVA+ VA RCH+ NKRVLALGGA+NHLVALPDC SAA DIVASFAGCAGQRCMAASVL+ VG+ L+++VV A L PG A G VG +I AS+ I+ I++A + +LLDGR W++R PGTWVGPTV+ A+ +EIFGPV+ V++V TW EAL +EN SP+GNAAS+YT+SGA AD F +RFRAGMIGVNVG+PVPREPFAFGGL+GT SK+G+ D+T EGA+EFFT +RK+TT+W Sbjct: 192 VPGGAFQLVNGAAPVVNALCDHPGIGALSFVGSSHVAQLVAERCHSV-NKRVLALGGAKNHLVALPDCHVASAAQDIVASFAGCAGQRCMAASVLICVGNVEGLVDEVVRLAALLKPGVAAGEVGAIIDAASQAKILRYINEA---EASGVRVLLDGRPWSQRSPGTWVGPTVLAHASAADAAVCDEIFGPVISVLQVATWDEALAIENGSPFGNAASIYTTSGAHADHFSSRFRAGMIGVNVGVPVPREPFAFGGLAGTRSKFGEGDITGEGALEFFTTRRKVTTRW 475
BLAST of mRNA_H-paniculata_contig1195.1240.1 vs. uniprot
Match: A0A4D9D1R9_9STRA (Methylmalonate-semialdehyde dehydrogenase (CoA acylating) n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D1R9_9STRA) HSP 1 Score: 352 bits (904), Expect = 4.780e-114 Identity = 194/334 (58.08%), Postives = 233/334 (69.76%), Query Frame = 1 Query: 1 VPPGVFQIVNGGRDAAEALCDSEGVKALTFVGSSHVAKSVASRCHAAGNKRVLALGGAENHLVALPDCEHESAAHDIVASFAGCAGQRCMAASVLVLVGDSGDLLEKVVAKAKALCPGTAPGNVGPVISTASRDHIVECISKAVSPDGGSGELLLDGRQWAER-RPGTWVGPTVILLKRRDKEALSEEIFGPVLMVVKVDTWQEALQVENASPYGNAASVYTSSGAAADFFQTRFRAGMIGVNVGIPVPREPFAFGGLSGTLSKYGDF-DVTAEGAMEFFTNKRKITTKWVMPEGAATTAGGGGAKM------------------DTANFVGQM 942 VPPGVFQ VNG +A AL D V+ +TFVGSS VA+ VA R NKRVLA+GGA+NHLVALPDC ESA+ DIVASFAGCAGQRCMAA+VL+L+G+ LLE V+ KA AL PG PG VG +I S++ I+ I A + LLLDGR WA + GTWVGPT++L R D EA+ EE+FGPVL V++V TW+EAL +E ++P+GNAA VYT+ GA A FF+TRFRAGMIGVNVG+PVPREPF+FGGL GT SKYG D+T EG +EF TNKRKIT+KW PEG + AGGG A + D A+FVG M Sbjct: 320 VPPGVFQTVNGQVEAVNALIDHPLVRGVTFVGSSRVAEVVAERASRL-NKRVLAMGGAKNHLVALPDCHVESASSDIVASFAGCAGQRCMAATVLILIGEQASLLEAVICKAGALRPGVEPGQVGAIIDAMSQERILRYIDGA---EKQGVTLLLDGRGWARAAKAGTWVGPTILLHTRADDEAMREEVFGPVLSVIRVATWEEALAIEASNPHGNAACVYTTVGAHAQFFETRFRAGMIGVNVGVPVPREPFSFGGLFGTRSKYGSMVDITGEGCLEFMTNKRKITSKWAFPEGESNGAGGGAAPLAEGGKKELDQGVRQAHAPDRASFVGAM 649
BLAST of mRNA_H-paniculata_contig1195.1240.1 vs. uniprot
Match: A0A2D4BG29_PYTIN (Methylmalonate-semialdehyde dehydrogenase (CoA acylating) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BG29_PYTIN) HSP 1 Score: 347 bits (889), Expect = 1.620e-113 Identity = 186/314 (59.24%), Postives = 230/314 (73.25%), Query Frame = 1 Query: 1 VPPGVFQIVNGGRDAAEALCDSEGVKALTFVGSSHVAKSVASRCHAAGNKRVLALGGAENHLVALPDCEHESAAHDIVASFAGCAGQRCMAASVLVLVGDSGDLLEKVVAKAKALCPGTAPGNVGPVISTASRDHIVECISKAVSPDGGSGELLLDGRQWAERRPGTWVGPTVILLKRRDKEALSEEIFGPVLMVVKVDTWQEALQVENASPYGNAASVYTSSGAAADFFQTRFRAGMIGVNVGIPVPREPFAFGGLSGTLSKYGDFDVTAEGAMEFFTNKRKITTKWVMPEGAATTAGGGGAKMDTANFVGQM 942 VPPGVFQ+VNG +A LCD V+ALTFVGSS VA+ VA RC A +KRVLALGGA+NHLVALPD + + AA DIVASFAGCAGQRCMAASVL+LVGD LL K+VA + L GT G VG +I AS+ +++ I +A G +L+DGR WA G WVGPT++L + A+ +EIFGPVL V KV T++EAL +ENA+ +GNAASVYTS+GA+A++FQTRFRA MIGVN+GIPVPREPF+FGGL GT SKYGD D+T +GA+EFF+ +RKITTKW +T+ A +D ANF Q+ Sbjct: 207 VPPGVFQLVNGAAEAVTTLCDHPDVRALTFVGSSRVAQLVARRCRAI-DKRVLALGGAKNHLVALPDADIDMAAKDIVASFAGCAGQRCMAASVLLLVGDCDALLAKIVAATQQLTRGTGAGQVGALIDAASKQRVLKYIDEAEQQYGA--RVLVDGRAWAAEPRGNWVGPTILLHAQASDPAMQDEIFGPVLSVFKVATFEEALAIENANDFGNAASVYTSNGASAEWFQTRFRAAMIGVNIGIPVPREPFSFGGLYGTKSKYGDMDITGDGAVEFFSQRRKITTKW-------STSTSTAAVVDKANFSAQI 510
BLAST of mRNA_H-paniculata_contig1195.1240.1 vs. uniprot
Match: A0A7S1CGC2_9STRA (Methylmalonate-semialdehyde dehydrogenase (CoA acylating) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CGC2_9STRA) HSP 1 Score: 339 bits (870), Expect = 1.340e-112 Identity = 179/315 (56.83%), Postives = 230/315 (73.02%), Query Frame = 1 Query: 1 VPPGVFQIVNGGRDAAEALCDSEGVKALTFVGSSHVAKSVASRCHAAGNKRVLALGGAENHLVALPDCEHESAAHDIVASFAGCAGQRCMAASVLVLVGDSGDLLEKVVAKAKALCPGTAPGNVGPVISTASRDHIVECISKAVSPDGGSGELLLDGRQWAERRP-GTWVGPTVILLKRRDKEALSEEIFGPVLMVVKVDTWQEALQVENASPYGNAASVYTSSGAAADFFQTRFRAGMIGVNVGIPVPREPFAFGGLSGTLSKYGDFDVTAEGAMEFFTNKRKITTKWVMPEGAATTAGGGGAKMDTANFVGQM 942 VP GV QIV+G + ALCD G+ ALTFVGSS VA V+ RCHA G K+ LALGGA+NHLVALPDC + AA DIVASF+GCAGQRCMAAS L++VG++ DL+++++A+A AL PGT G VG +I ++ I+ I +A + E+LLDGR WA+ G WVGPTVIL K ++ A+ +EIFGPVL V+KV + EA+++ENA+P+GNAAS+YTS GA A++F +RFRAGMIGVN+G+PVPREPF+FGG+ GTLS +G D+T +GAMEFFT +RKITTKW P G D A+F G+M Sbjct: 66 VPAGVIQIVHGQVEPVTALCDHPGLAALTFVGSSRVADIVSKRCHANG-KKCLALGGAKNHLVALPDCNADMAAQDIVASFSGCAGQRCMAASALLVVGENPDLMDRIIARAGALKPGTESGCVGAIIDEVAKARILRYIDEA---EASGAEILLDGRGWAKTADAGNWVGPTVILHKSAEEAAMQDEIFGPVLSVLKVANFDEAIKIENANPHGNAASIYTSVGAHAEWFSSRFRAGMIGVNIGVPVPREPFSFGGMQGTLSNFGGSDITGDGAMEFFTRRRKITTKWARPAGFDG---------DLASFDGKM 367 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1195.1240.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1195.1240.1 >prot_H-paniculata_contig1195.1240.1 ID=prot_H-paniculata_contig1195.1240.1|Name=mRNA_H-paniculata_contig1195.1240.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=315bp VPPGVFQIVNGGRDAAEALCDSEGVKALTFVGSSHVAKSVASRCHAAGNKback to top mRNA from alignment at H-paniculata_contig1195:20605..27922- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig1195.1240.1 ID=mRNA_H-paniculata_contig1195.1240.1|Name=mRNA_H-paniculata_contig1195.1240.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=7318bp|location=Sequence derived from alignment at H-paniculata_contig1195:20605..27922- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig1195:20605..27922- >mRNA_H-paniculata_contig1195.1240.1 ID=mRNA_H-paniculata_contig1195.1240.1|Name=mRNA_H-paniculata_contig1195.1240.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1890bp|location=Sequence derived from alignment at H-paniculata_contig1195:20605..27922- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |