prot_H-paniculata_contig5104.12398.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig5104.12398.1
Unique Name	prot_H-paniculata_contig5104.12398.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	97

Homology

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BLAST of mRNA_H-paniculata_contig5104.12398.1 vs. uniprot
Match: A0A6H5L059_9PHAE (Protein pelota homolog n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L059_9PHAE)

HSP 1 Score: 163 bits (412), Expect = 8.990e-47
Identity = 84/97 (86.60%), Postives = 89/97 (91.75%), Query Frame = 0

Query:    1 MKVLKRQISTKDGDGFVQMKTEEAEDMWHAYNLIMAGDRVRTTTVRKVMNESSTGSMTSKRVRLSLTIAVERVDFDSSSCLLRLSGRNSAENPHVKV 97
            MKVL+RQIS+KDGDGFVQMKTEEAEDMWHAYNLI  GDRVRT+TV   +NESSTGS TSKRVRLSLTIAVERVDFDS SCLLRLSGRNS ENPHVK+
Sbjct:    1 MKVLRRQISSKDGDGFVQMKTEEAEDMWHAYNLIADGDRVRTSTV---VNESSTGSTTSKRVRLSLTIAVERVDFDSDSCLLRLSGRNSEENPHVKI 94

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BLAST of mRNA_H-paniculata_contig5104.12398.1 vs. uniprot
Match: A0A835Z3B0_9STRA (Protein pelota homolog n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3B0_9STRA)

HSP 1 Score: 134 bits (337), Expect = 1.040e-35
Identity = 65/97 (67.01%), Postives = 80/97 (82.47%), Query Frame = 0

Query:    1 MKVLKRQISTKDGDGFVQMKTEEAEDMWHAYNLIMAGDRVRTTTVRKVMNESSTGSMTSKRVRLSLTIAVERVDFDSSSCLLRLSGRNSAENPHVKV 97
            MKV+ + +  KDG G+++++ EE EDMWHAYNLI  GDRVRTTTVRKV++ESSTGS +SKRVRL+LTI VER DFDS  C+LRLSG+N  EN HVK+
Sbjct:    1 MKVVAKHLE-KDGAGYIKLQAEETEDMWHAYNLIAVGDRVRTTTVRKVVSESSTGSTSSKRVRLNLTIGVERTDFDSEGCVLRLSGKNVEENAHVKI 96

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BLAST of mRNA_H-paniculata_contig5104.12398.1 vs. uniprot
Match: A0A2D4BPZ5_PYTIN (mRNA surveillance protein pelota n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BPZ5_PYTIN)

HSP 1 Score: 121 bits (303), Expect = 3.610e-33
Identity = 57/97 (58.76%), Postives = 75/97 (77.32%), Query Frame = 0

Query:    1 MKVLKRQISTKDGDGFVQMKTEEAEDMWHAYNLIMAGDRVRTTTVRKVMNESSTGSMTSKRVRLSLTIAVERVDFDSSSCLLRLSGRNSAENPHVKV 97
            MK+LK+QIS KDG G + ++ EE EDMWH YNLI  GD V+TTT+RKV+ E  TGS +S+RVRL+L I VE+V+FD   C+LR+ G+NS EN HV++
Sbjct:    1 MKLLKKQISEKDGVGSIVLRAEEPEDMWHIYNLIHVGDSVKTTTIRKVVKEGVTGSTSSQRVRLTLQIEVEQVNFDPGQCVLRIKGKNSLENQHVRM 97

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BLAST of mRNA_H-paniculata_contig5104.12398.1 vs. uniprot
Match: A0A397FB59_9STRA (eRF1_1 domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397FB59_9STRA)

HSP 1 Score: 119 bits (299), Expect = 1.340e-32
Identity = 53/97 (54.64%), Postives = 75/97 (77.32%), Query Frame = 0

Query:    1 MKVLKRQISTKDGDGFVQMKTEEAEDMWHAYNLIMAGDRVRTTTVRKVMNESSTGSMTSKRVRLSLTIAVERVDFDSSSCLLRLSGRNSAENPHVKV 97
            MK+LK+ IS KDG G V ++ EE EDMWH +NLI  GD ++TTTVRKV+ E +TGS +S+R+R+SL + ++++DFD + CLLR+ G N  ENPHV++
Sbjct:    1 MKLLKKNISEKDGTGSVSLRAEEPEDMWHVFNLIHKGDTLKTTTVRKVVKEGATGSTSSQRMRMSLALEIDKIDFDPAKCLLRIKGVNVEENPHVRM 97

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BLAST of mRNA_H-paniculata_contig5104.12398.1 vs. uniprot
Match: A0A1B6FWD0_9HEMI (eRF1_1 domain-containing protein (Fragment) n=1 Tax=Cuerna arida TaxID=1464854 RepID=A0A1B6FWD0_9HEMI)

HSP 1 Score: 119 bits (297), Expect = 3.390e-32
Identity = 58/97 (59.79%), Postives = 75/97 (77.32%), Query Frame = 0

Query:    1 MKVLKRQISTKDGDGFVQMKTEEAEDMWHAYNLIMAGDRVRTTTVRKVMNESSTGSMTSKRVRLSLTIAVERVDFDSSSCLLRLSGRNSAENPHVKV 97
            MK++ + +  KDG+G V +  EE+EDMWHAYNLI  GD VR +T+RKV NESSTGS TS RVR +LTI+VE +DFD+ +C+LRL GRN  EN +VK+
Sbjct:    1 MKLIYKNVD-KDGNGSVTLIPEESEDMWHAYNLISEGDSVRASTIRKVQNESSTGSSTSSRVRTTLTISVETIDFDTQACMLRLKGRNIEENQYVKM 96

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BLAST of mRNA_H-paniculata_contig5104.12398.1 vs. uniprot
Match: A0A418AJ15_9STRA (eRF1_1 domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A418AJ15_9STRA)

HSP 1 Score: 120 bits (300), Expect = 1.570e-31
Identity = 55/97 (56.70%), Postives = 74/97 (76.29%), Query Frame = 0

Query:    1 MKVLKRQISTKDGDGFVQMKTEEAEDMWHAYNLIMAGDRVRTTTVRKVMNESSTGSMTSKRVRLSLTIAVERVDFDSSSCLLRLSGRNSAENPHVKV 97
            MK+LKR IS KDG G V ++ EE EDMWH +NLI  GD ++TTTVRKV+ E +TGS +S+R+R+SL + ++ +DFD + CLLR+ G N  ENPHV+V
Sbjct:    1 MKLLKRNISEKDGTGSVTLRAEEPEDMWHVFNLIHKGDVLKTTTVRKVVKEGATGSTSSQRLRMSLALEIDHIDFDPAKCLLRIKGINVEENPHVRV 97

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BLAST of mRNA_H-paniculata_contig5104.12398.1 vs. uniprot
Match: A0A146LH88_LYGHE (Protein pelota (Fragment) n=1 Tax=Lygus hesperus TaxID=30085 RepID=A0A146LH88_LYGHE)

HSP 1 Score: 116 bits (290), Expect = 1.750e-31
Identity = 57/97 (58.76%), Postives = 74/97 (76.29%), Query Frame = 0

Query:    1 MKVLKRQISTKDGDGFVQMKTEEAEDMWHAYNLIMAGDRVRTTTVRKVMNESSTGSMTSKRVRLSLTIAVERVDFDSSSCLLRLSGRNSAENPHVKV 97
            MK+L + +  K+G+G V +  EE EDMWHAYNLI  GD VR+TT+RKV +ES+TGS TS RVR +LTI VE +DFD+ +C+LRL GRN  EN +VK+
Sbjct:    1 MKLLYKNVD-KEGEGTVGLIAEEPEDMWHAYNLISKGDSVRSTTIRKVQSESATGSSTSSRVRTTLTICVENIDFDTQACVLRLKGRNVEENQYVKM 96

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BLAST of mRNA_H-paniculata_contig5104.12398.1 vs. uniprot
Match: A0A2R7W4X8_ONCFA (eRF1_1 domain-containing protein n=1 Tax=Oncopeltus fasciatus TaxID=7536 RepID=A0A2R7W4X8_ONCFA)

HSP 1 Score: 118 bits (295), Expect = 2.940e-31
Identity = 58/97 (59.79%), Postives = 74/97 (76.29%), Query Frame = 0

Query:    1 MKVLKRQISTKDGDGFVQMKTEEAEDMWHAYNLIMAGDRVRTTTVRKVMNESSTGSMTSKRVRLSLTIAVERVDFDSSSCLLRLSGRNSAENPHVKV 97
            MK++ + +  KDG+G V +  EE+EDMWHAYNLI  GD VR +T+RKV NESSTGS TS RVR +LTI VE +DFD+ +C+LRL GRN  EN +VK+
Sbjct:    1 MKLVYKNVD-KDGEGSVTLVPEESEDMWHAYNLISEGDSVRASTIRKVQNESSTGSSTSNRVRTTLTIRVEAIDFDTQACVLRLKGRNIEENQYVKM 96

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BLAST of mRNA_H-paniculata_contig5104.12398.1 vs. uniprot
Match: A0A397ELU4_9STRA (Eukaryotic peptide chain release factor subunit 1 n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397ELU4_9STRA)

HSP 1 Score: 120 bits (302), Expect = 3.660e-31
Identity = 54/97 (55.67%), Postives = 75/97 (77.32%), Query Frame = 0

Query:    1 MKVLKRQISTKDGDGFVQMKTEEAEDMWHAYNLIMAGDRVRTTTVRKVMNESSTGSMTSKRVRLSLTIAVERVDFDSSSCLLRLSGRNSAENPHVKV 97
            MK+LK+ IS KDG G V ++ EE EDMWH +NLI  GD ++TTTVRKV+ E +TGS +S+R+R+SL + ++++DFD + CLLR+ G N  ENPHV+V
Sbjct:    1 MKLLKKNISEKDGTGSVSLRAEEPEDMWHVFNLIHKGDTLKTTTVRKVVKEGATGSTSSQRMRMSLALEIDKIDFDPAKCLLRIKGVNVEENPHVRV 97

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BLAST of mRNA_H-paniculata_contig5104.12398.1 vs. uniprot
Match: A0A1V9ZXG7_9STRA (Protein pelota homolog n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A1V9ZXG7_9STRA)

HSP 1 Score: 121 bits (304), Expect = 6.410e-31
Identity = 54/97 (55.67%), Postives = 77/97 (79.38%), Query Frame = 0

Query:    1 MKVLKRQISTKDGDGFVQMKTEEAEDMWHAYNLIMAGDRVRTTTVRKVMNESSTGSMTSKRVRLSLTIAVERVDFDSSSCLLRLSGRNSAENPHVKV 97
            MK+LKR I+ KDG+G V ++ E+ EDMWH +NL+  GD V+TTTVRKV+ E +TGS TS+RVR++L++ +E +DFD + CLLR+ G+N  ENPHV++
Sbjct:    1 MKLLKRNINEKDGNGSVVLRAEDPEDMWHVFNLMHKGDTVKTTTVRKVIKEGATGSTTSQRVRMTLSLQMEHIDFDPAKCLLRIRGKNVEENPHVRM 97

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig5104.12398.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig5104.12398.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5L059_9PHAE	8.990e-47	86.60	Protein pelota homolog n=2 Tax=Ectocarpus TaxID=28...	[more]
A0A835Z3B0_9STRA	1.040e-35	67.01	Protein pelota homolog n=1 Tax=Tribonema minus Tax...	[more]
A0A2D4BPZ5_PYTIN	3.610e-33	58.76	mRNA surveillance protein pelota n=1 Tax=Pythium i...	[more]
A0A397FB59_9STRA	1.340e-32	54.64	eRF1_1 domain-containing protein n=1 Tax=Aphanomyc...	[more]
A0A1B6FWD0_9HEMI	3.390e-32	59.79	eRF1_1 domain-containing protein (Fragment) n=1 Ta...	[more]
A0A418AJ15_9STRA	1.570e-31	56.70	eRF1_1 domain-containing protein n=1 Tax=Aphanomyc...	[more]
A0A146LH88_LYGHE	1.750e-31	58.76	Protein pelota (Fragment) n=1 Tax=Lygus hesperus T...	[more]
A0A2R7W4X8_ONCFA	2.940e-31	59.79	eRF1_1 domain-containing protein n=1 Tax=Oncopeltu...	[more]
A0A397ELU4_9STRA	3.660e-31	55.67	Eukaryotic peptide chain release factor subunit 1 ...	[more]
A0A1V9ZXG7_9STRA	6.410e-31	55.67	Protein pelota homolog n=4 Tax=Saprolegniaceae Tax...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005140	eRF1 domain 1/Pelota-like	SMART	SM01194	eRF1_1_2	coord: 1..97 e-value: 3.3E-19 score: 79.8
IPR005140	eRF1 domain 1/Pelota-like	PFAM	PF03463	eRF1_1	coord: 1..96 e-value: 7.5E-33 score: 113.3
IPR038069	Pelota/DOM34, N-terminal domain	GENE3D	2.30.30.870		coord: 1..97 e-value: 3.1E-31 score: 109.8
IPR038069	Pelota/DOM34, N-terminal domain	SUPERFAMILY	159065	Dom34/Pelota N-terminal domain-like	coord: 1..96
IPR004405	Translation release factor pelota	PANTHER	PTHR10853	PELOTA	coord: 1..97
None	No IPR available	PANTHER	PTHR10853:SF0	PROTEIN PELOTA HOMOLOG	coord: 1..97

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig5104	contig	H-paniculata_contig5104:2362..3243 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig5104.12398.1	mRNA_H-paniculata_contig5104.12398.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig5104 2362..3243 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig5104.12398.1 ID=prot_H-paniculata_contig5104.12398.1|Name=mRNA_H-paniculata_contig5104.12398.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=97bp
MKVLKRQISTKDGDGFVQMKTEEAEDMWHAYNLIMAGDRVRTTTVRKVMN
ESSTGSMTSKRVRLSLTIAVERVDFDSSSCLLRLSGRNSAENPHVKV

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR005140	eRF1_1_Pelota
IPR038069	Pelota/DOM34_N
IPR004405	Transl-rel_pelota