prot_H-paniculata_contig510.12393.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig510.12393.1
Unique Nameprot_H-paniculata_contig510.12393.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length549
Homology
BLAST of mRNA_H-paniculata_contig510.12393.1 vs. uniprot
Match: A0A6H5J832_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J832_9PHAE)

HSP 1 Score: 384 bits (985), Expect = 3.160e-124
Identity = 237/473 (50.11%), Postives = 299/473 (63.21%), Query Frame = 0
Query:    1 MKHPGVRSLALGACLCSLYIGYELARACTISLFTKQKTNGLGGAVLALGGCLLSLGSLAVYGRGVQLLGAAWTLFTSACVCSVVFVLCAVGLMWSPEGDEAGALFRTLVSCTFAFREVYVSVMGTQIWALLSVELKARGPEMSRRWFCIIQGVSCMCSALAGLATGRMVTAKGEICLLLATATSLFTIAGTVGIMFCRIGDADRCSVSSSTDETRGKPIGKPNGKKYSRTQVDGVKMRHLHDGEQRGGDGQVEKVDRRLESGGLWQVLRSSAALFQRNPLLAALLAETIVCQILTAIMNMSFNEAVRQSRMVETSLGSS-ARAAGFVGKSFAFIGLFSGVLQLVVMPWAMVWVDLFLLLRGLPLVAGAGYSVSLLHPGFRTATAAFAVTKILDYSIRGTALELVYQSMPEHERLLGKEAIATVGLRFGRTGAHMVLNLCSAALGGVLPQRVLMALALVGASLWTLTLRQIKLL 472
            M+HPG   LALG CLC LY GYELARA +++LF K    GL GA+ +    +LS+  L VYG G ++LG  WTL  SA  C VVF+  A        GD    + RT+V   +AFRE+YV+++ TQ+W LLS  LK RG   SRRWFCIIQGVSC+CSA +G+A GR+ TA G+  LLLA A SL TI  T              +V+ +  +  G    K  G                             K  ++    G+  VLRSSA+LF+++PLLAALLAE  VCQ+L A +N+SFNEA+RQ    E + G + A AAGFVG SFA IGL SG+LQLVVMPWAMV V+  LLL+ LP+VAG G+ V+ + PGFRTAT AF+VTKIL+YS+RGT LELVYQ+M + ER LGKEAIATVG+R GRT A ++L LCSA LGG  PQR LM +A V +  W  T+R+++ L
Sbjct:    1 MRHPGGHFLALGWCLCLLYSGYELARASSLALFNKSDA-GLSGALTSAVSFVLSVAMLGVYGVGAEVLGGKWTLVVSASGCCVVFLAFAFACF----GDAD--VSRTVVCGLYAFREMYVALIATQVWELLSAALKQRGERESRRWFCIIQGVSCICSAFSGVAAGRLATAGGQAYLLLAAALSLGTITVT--------------AVALTPVKAGGWGFEKVEG-----------------------------KTGKKKSDHGMLSVLRSSASLFRQSPLLAALLAEATVCQVLVATLNLSFNEAIRQGLPREEASGETGAGAAGFVGNSFAVIGLVSGILQLVVMPWAMVRVNPSLLLKTLPVVAGGGFLVTFVSPGFRTATVAFSVTKILEYSVRGTVLELVYQAMADDERRLGKEAIATVGVRIGRTTAQVLLYLCSAVLGGTPPQRALMGVAFVLSIAWGATIRKVEAL 423          
BLAST of mRNA_H-paniculata_contig510.12393.1 vs. uniprot
Match: D7FW23_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW23_ECTSI)

HSP 1 Score: 175 bits (444), Expect = 5.980e-48
Identity = 102/192 (53.12%), Postives = 126/192 (65.62%), Query Frame = 0
Query:    1 MKHPGVRSLALGACLCSLYIGYELARACTISLFTKQKTNGLGGAVLALGGCLLSLGSLAVYGRGVQLLGAAWTLFTSACVCSVVFVLCAVGLMWSPEGDEAGALF-RTLVSCTFAFREVYVSVMGTQIWALLSVELKARGPEMSRRWFCIIQGVSCMCSALAGLATGRMVTAKGEICLLLATATSLFTIAGT 191
            M+HPG  SLALG CLC LY GYELARA +++LF K    GL GA+ +    +LS+  L VYG G + LG  WTL  SA  C VVF+  A        GD   A+F RT++   +AFRE+YV+++ TQ+W LLS  LK RG   SRRWFCIIQGVSC+CSA +G+A GR+ TA G+  LLLA A SL TI  T
Sbjct:    1 MRHPGGHSLALGWCLCLLYSGYELARASSLALFNKSDA-GLSGALTSTVSFVLSVAMLGVYGVGAEALGGKWTLVVSAGGCCVVFLAFAFACF----GD---AVFGRTVICGLYAFREMYVALIATQVWGLLSAALKQRGERESRRWFCIIQGVSCICSAFSGVAAGRLATAGGQAYLLLAAALSLGTITVT 184          
BLAST of mRNA_H-paniculata_contig510.12393.1 vs. uniprot
Match: A0A7X4FCD4_9BACT (ADP,ATP carrier protein n=3 Tax=Candidatus Poribacteria bacterium TaxID=2026781 RepID=A0A7X4FCD4_9BACT)

HSP 1 Score: 78.2 bits (191), Expect = 8.810e-12
Identity = 91/370 (24.59%), Postives = 151/370 (40.81%), Query Frame = 0
Query:  113 FAFREVYVSVMGTQIWALLSVELKARGPEMSRRWFCIIQGVSCMCSALAGLATGRMVTAKGEICLLLATATSLFTIAGTVGIMFCRIGDADRCSVSSSTDETRGKPIGKPNGKKYSRTQVDGVKMRHLHDGEQRGGDGQVEKVDRRLESGGLWQVLRSSAALFQRNPLLAALLAETIVCQILTAIMNMSFNEAVRQSRMVETSLGSSARAAGFVGKSFAFIGLFSGVLQLVVMPWAMVWVDLFLLLRGLPLVAGAGYSVSLLHPGFRTATAAFAVTKILDYSIRGTALELVYQSMPEHERLLGKEAIATVGLRFGRTGAHMVLNLCSAALGGVLPQRVLMALALVGASLW-----TLTLRQIKLLGGSTT 477
            + FRE Y+ ++  Q W+ ++  L     +     FC    V+ M S   G+   R     G   LLL  A SL   A    ++  R G   + S   +                       G ++ HL                      G+  + RS   LF     +  L+  T   Q+++ ++++ FN       + E  L  +     F G  + ++GL +G+LQLV++P A+ +VDL ++   +P+V      V  + P  R+ TAA+ + K LDYSI   A EL Y  +    R   K+ I + G RF ++G   V+ L    +  + P       A+V A +W     +LT    +L+G + T
Sbjct:  105 YVFREAYIVIVIEQFWSFVNSVLTTEQAKRINGPFC---AVASMGSFAGGMLVKRWAEVLGSETLLLFAAGSLVP-AAVFSVIAYRFGGEPKPSEEEA-----------------------GGRLGHL----------------------GVKTLFRSRYLLF-----IGILILST---QLVSTVLDLRFNG------LAEMELSDTDARTAFFGGVYGYLGLAAGILQLVIVPLALRFVDLRIIHVSVPMVHLVSGLVLTVSPSLRSGTAAYVIFKALDYSIFRAAKELFYMPLSYDSRYRAKQLIDSFGYRFSKSGGAAVIGLVKLVVKTI-PGVAFSITAMVAAMVWGPIAFSLTRMYQRLVGETGT 410          
BLAST of mRNA_H-paniculata_contig510.12393.1 vs. uniprot
Match: A0A7S2PQM4_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PQM4_9STRA)

HSP 1 Score: 78.2 bits (191), Expect = 9.830e-12
Identity = 66/222 (29.73%), Postives = 105/222 (47.30%), Query Frame = 0
Query:  252 VEKVDRRLE-SGGLWQVLRSSAALFQRNPLLAALLAETIVCQILTAIMNMSFNEAVRQSRMVETSLGSSARAAGFVGKSFAFIGLFSGVLQLVVMPWAM-------VWVDL---FLLLRGLPLVAGAGYSVSLLHPGFRTATAAFAVTKILDYSIRGTALELVYQSMPEHERLLGKEAIATVGLRFGRTGAHMVLNLCSAALGGVLPQRVLMALALVGASLW 462
            V+K D +++ S  LW   R    LFQR P+L AL  E + CQ L  I+N+S+   ++ S      L   A  A + G+ +A +   SG LQ   +P  M       VWV +    L L  L  + G        +     A+ +F   KI++YS+RG A ELVY S+ +  R  GK+ I T G++  ++    +L+  ++        ++  +L L  + LW
Sbjct:  213 VKKEDEKIKTSKSLWTRSRD---LFQRVPILHALACEILACQTLATILNVSYITKLKDS------LPHGADRASWTGRFYAIVNGISGTLQFTALPSLMSNVDQHNVWVTIPTIMLFLGSLSSIVG--------NTSLFMASVSFGSLKIMEYSVRGVATELVYVSLDDESRYSGKQIITTFGVKIAKSLTSFLLSRITSGRDPDTNSKIFSSLTLFTSCLW 417          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig510.12393.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5J832_9PHAE3.160e-12450.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FW23_ECTSI5.980e-4853.13Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7X4FCD4_9BACT8.810e-1224.59ADP,ATP carrier protein n=3 Tax=Candidatus Poribac... [more]
A0A7S2PQM4_9STRA9.830e-1229.73Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004667ADP/ATP carrier proteinPANTHERPTHR31187FAMILY NOT NAMEDcoord: 9..462
NoneNo IPR availablePANTHERPTHR31187:SF1ADP,ATP CARRIER PROTEIN 1, CHLOROPLASTICcoord: 9..462
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 198..279
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 41..61
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 26..40
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 21..25
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..25
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 145..165
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 177..197
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 450..469
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 350..371
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 280..302
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 68..94
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 62..67
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 344..349
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 95..113
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 114..133
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 470..548
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..8
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 166..176
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 303..321
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 9..20
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 322..343
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 134..144
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 372..449
NoneNo IPR availableTMHMMTMhelixcoord: 175..197
NoneNo IPR availableTMHMMTMhelixcoord: 40..62
NoneNo IPR availableTMHMMTMhelixcoord: 72..94
NoneNo IPR availableTMHMMTMhelixcoord: 5..27
NoneNo IPR availableTMHMMTMhelixcoord: 146..165
NoneNo IPR availableTMHMMTMhelixcoord: 330..352

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig510contigH-paniculata_contig510:29947..35034 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig510.12393.1mRNA_H-paniculata_contig510.12393.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig510 29485..35298 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig510.12393.1 ID=prot_H-paniculata_contig510.12393.1|Name=mRNA_H-paniculata_contig510.12393.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=549bp
MKHPGVRSLALGACLCSLYIGYELARACTISLFTKQKTNGLGGAVLALGG
CLLSLGSLAVYGRGVQLLGAAWTLFTSACVCSVVFVLCAVGLMWSPEGDE
AGALFRTLVSCTFAFREVYVSVMGTQIWALLSVELKARGPEMSRRWFCII
QGVSCMCSALAGLATGRMVTAKGEICLLLATATSLFTIAGTVGIMFCRIG
DADRCSVSSSTDETRGKPIGKPNGKKYSRTQVDGVKMRHLHDGEQRGGDG
QVEKVDRRLESGGLWQVLRSSAALFQRNPLLAALLAETIVCQILTAIMNM
SFNEAVRQSRMVETSLGSSARAAGFVGKSFAFIGLFSGVLQLVVMPWAMV
WVDLFLLLRGLPLVAGAGYSVSLLHPGFRTATAAFAVTKILDYSIRGTAL
ELVYQSMPEHERLLGKEAIATVGLRFGRTGAHMVLNLCSAALGGVLPQRV
LMALALVGASLWTLTLRQIKLLGGSTTVRGGRQDGVISMMKKGVVRGIHR
EVGGSGATRERHQRIVQPNNVGVHIVEVRKSLSLKATVVSLEKGRKEL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004667ADP_ATP_car