|
|
Homology
BLAST of mRNA_H-paniculata_contig510.12393.1 vs. uniprot
Match: A0A6H5J832_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J832_9PHAE) HSP 1 Score: 384 bits (985), Expect = 3.930e-121 Identity = 237/473 (50.11%), Postives = 299/473 (63.21%), Query Frame = 1
Query: 265 MKHPGVRSLALGACLCSLYIGYELARACTISLFTKQKTNGLGGAVLALGGCLLSLGSLAVYGRGVQLLGAAWTLFTSACVCSVVFVLCAVGLMWSPEGDEAGALFRTLVSCTFAFREVYVSVMGTQIWALLSVELKARGPEMSRRWFCIIQGVSCMCSALAGLATGRMVTAKGEICLLLATATSLFTIAGTVGIMFCRIGDADRCSVSSSTDETRGKPIGKPNGKKYSRTQVDGVKMRHLHDGEQRGGDGQVEKVDRRLESGGLWQVLRSSAALFQRNPLLAALLAETIVCQILTAIMNMSFNEAVRQSRMVETSLGSS-ARAAGFVGKSFAFIGLFSGVLQLVVMPWAMVWVDLFLLLRGLPLVAGAGYSVSLLHPGFRTATAAFAVTKILDYSIRGTALELVYQSMPEHERLLGKEAIATVGLRFGRTGAHMVLNLCSAALGGVLPQRVLMALALVGASLWTLTLRQIKLL 1680
M+HPG LALG CLC LY GYELARA +++LF K GL GA+ + +LS+ L VYG G ++LG WTL SA C VVF+ A GD + RT+V +AFRE+YV+++ TQ+W LLS LK RG SRRWFCIIQGVSC+CSA +G+A GR+ TA G+ LLLA A SL TI T +V+ + + G K G K ++ G+ VLRSSA+LF+++PLLAALLAE VCQ+L A +N+SFNEA+RQ E + G + A AAGFVG SFA IGL SG+LQLVVMPWAMV V+ LLL+ LP+VAG G+ V+ + PGFRTAT AF+VTKIL+YS+RGT LELVYQ+M + ER LGKEAIATVG+R GRT A ++L LCSA LGG PQR LM +A V + W T+R+++ L
Sbjct: 1 MRHPGGHFLALGWCLCLLYSGYELARASSLALFNKSDA-GLSGALTSAVSFVLSVAMLGVYGVGAEVLGGKWTLVVSASGCCVVFLAFAFACF----GDAD--VSRTVVCGLYAFREMYVALIATQVWELLSAALKQRGERESRRWFCIIQGVSCICSAFSGVAAGRLATAGGQAYLLLAAALSLGTITVT--------------AVALTPVKAGGWGFEKVEG-----------------------------KTGKKKSDHGMLSVLRSSASLFRQSPLLAALLAEATVCQVLVATLNLSFNEAIRQGLPREEASGETGAGAAGFVGNSFAVIGLVSGILQLVVMPWAMVRVNPSLLLKTLPVVAGGGFLVTFVSPGFRTATVAFSVTKILEYSVRGTVLELVYQAMADDERRLGKEAIATVGVRIGRTTAQVLLYLCSAVLGGTPPQRALMGVAFVLSIAWGATIRKVEAL 423
BLAST of mRNA_H-paniculata_contig510.12393.1 vs. uniprot
Match: D7FW23_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW23_ECTSI) HSP 1 Score: 175 bits (444), Expect = 1.180e-46 Identity = 102/192 (53.12%), Postives = 126/192 (65.62%), Query Frame = 1
Query: 265 MKHPGVRSLALGACLCSLYIGYELARACTISLFTKQKTNGLGGAVLALGGCLLSLGSLAVYGRGVQLLGAAWTLFTSACVCSVVFVLCAVGLMWSPEGDEAGALF-RTLVSCTFAFREVYVSVMGTQIWALLSVELKARGPEMSRRWFCIIQGVSCMCSALAGLATGRMVTAKGEICLLLATATSLFTIAGT 837
M+HPG SLALG CLC LY GYELARA +++LF K GL GA+ + +LS+ L VYG G + LG WTL SA C VVF+ A GD A+F RT++ +AFRE+YV+++ TQ+W LLS LK RG SRRWFCIIQGVSC+CSA +G+A GR+ TA G+ LLLA A SL TI T
Sbjct: 1 MRHPGGHSLALGWCLCLLYSGYELARASSLALFNKSDA-GLSGALTSTVSFVLSVAMLGVYGVGAEALGGKWTLVVSAGGCCVVFLAFAFACF----GD---AVFGRTVICGLYAFREMYVALIATQVWGLLSAALKQRGERESRRWFCIIQGVSCICSAFSGVAAGRLATAGGQAYLLLAAALSLGTITVT 184
BLAST of mRNA_H-paniculata_contig510.12393.1 vs. uniprot
Match: A0A7S2PQM4_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PQM4_9STRA) HSP 1 Score: 78.6 bits (192), Expect = 1.390e-11 Identity = 113/488 (23.16%), Postives = 198/488 (40.57%), Query Frame = 1
Query: 220 AVPSQ*QERGPLRAEMKHPGVRSLALGACLCSLYIGYELARACTISLFTKQKTNGLGGAVLALGGCLLSLGSLAVYGRGVQLLGAAWTLFTSACVCSVVFVLCAVGLMWSPEGDEAGALFRTLVSCTFAFREVYVSVMGTQIWALLSVELKARGPEMSRRWFCIIQGVSCMCSALAGLATGRMVTAKGEICLLLATATSLFTIAGTVGIMFCRIGDADRCSVSSSTDETRGKPIGKPNGKKYSRTQVDGVKMRHLHDGEQRGGDGQVEKVDRRLE-SGGLWQVLRSSAALFQRNPLLAALLAETIVCQILTAIMNMSFNEAVRQSRMVETSLGSSARAAGFVGKSFAFIGLFSGVLQLVVMPWAM-------VWVDL---FLLLRGLPLVAGAGYSVSLLHPGFRTATAAFAVTKILDYSIRGTALELVYQSMPEHERLLGKEAIATVGLRFGRTGAHMVLNLCSAALGGVLPQRVLMALALVGASLW 1650
A+ ++ R + E KH +L++ L YE+ R+ + +L T + +++L SL L + ++ GA +TL+ + + FV+ V G + V + +E ++ TQ W+ +S + P + F I GV + A+AG +++ ++LF I G + GD Y+ + +G + + L +V+K D +++ S LW R LFQR P+L AL E + CQ L I+N+S+ ++ S L A A + G+ +A + SG LQ +P M VWV + L L L + G + A+ +F KI++YS+RG A ELVY S+ + R GK+ I T G++ ++ +L+ ++ ++ +L L + LW
Sbjct: 3 AITAKQIPRDAMVNENKHVVYMALSMSI----LSATYEILRSASTALVTSSGESTNVSLLMSLS-TPFSLVLLLWFNYEMRSGGARYTLWRTTNTIAFFFVIMNVIFAAEMAGPFS-------VGMVYLMQESCYHLIVTQQWSFISSVVT---PSQGKTIFAPIGGVCSISGAVAGYMVKSLLSYMDI--------SNLFGIGGLFLFVTASYGDYA-----------------------YAIAEKNGTRTKAL----------KVKKEDEKIKTSKSLWTRSRD---LFQRVPILHALACEILACQTLATILNVSYITKLKDS------LPHGADRASWTGRFYAIVNGISGTLQFTALPSLMSNVDQHNVWVTIPTIMLFLGSLSSIVG--------NTSLFMASVSFGSLKIMEYSVRGVATELVYVSLDDESRYSGKQIITTFGVKIAKSLTSFLLSRITSGRDPDTNSKIFSSLTLFTSCLW 417
BLAST of mRNA_H-paniculata_contig510.12393.1 vs. uniprot
Match: A0A7X4FCD4_9BACT (ADP,ATP carrier protein n=3 Tax=Candidatus Poribacteria bacterium TaxID=2026781 RepID=A0A7X4FCD4_9BACT) HSP 1 Score: 78.2 bits (191), Expect = 1.630e-11 Identity = 91/370 (24.59%), Postives = 151/370 (40.81%), Query Frame = 1
Query: 601 FAFREVYVSVMGTQIWALLSVELKARGPEMSRRWFCIIQGVSCMCSALAGLATGRMVTAKGEICLLLATATSLFTIAGTVGIMFCRIGDADRCSVSSSTDETRGKPIGKPNGKKYSRTQVDGVKMRHLHDGEQRGGDGQVEKVDRRLESGGLWQVLRSSAALFQRNPLLAALLAETIVCQILTAIMNMSFNEAVRQSRMVETSLGSSARAAGFVGKSFAFIGLFSGVLQLVVMPWAMVWVDLFLLLRGLPLVAGAGYSVSLLHPGFRTATAAFAVTKILDYSIRGTALELVYQSMPEHERLLGKEAIATVGLRFGRTGAHMVLNLCSAALGGVLPQRVLMALALVGASLW-----TLTLRQIKLLGGSTT 1695
+ FRE Y+ ++ Q W+ ++ L + FC V+ M S G+ R G LLL A SL A ++ R G + S + G ++ HL G+ + RS LF + L+ T Q+++ ++++ FN + E L + F G + ++GL +G+LQLV++P A+ +VDL ++ +P+V V + P R+ TAA+ + K LDYSI A EL Y + R K+ I + G RF ++G V+ L + + P A+V A +W +LT +L+G + T
Sbjct: 105 YVFREAYIVIVIEQFWSFVNSVLTTEQAKRINGPFC---AVASMGSFAGGMLVKRWAEVLGSETLLLFAAGSLVP-AAVFSVIAYRFGGEPKPSEEEA-----------------------GGRLGHL----------------------GVKTLFRSRYLLF-----IGILILST---QLVSTVLDLRFNG------LAEMELSDTDARTAFFGGVYGYLGLAAGILQLVIVPLALRFVDLRIIHVSVPMVHLVSGLVLTVSPSLRSGTAAYVIFKALDYSIFRAAKELFYMPLSYDSRYRAKQLIDSFGYRFSKSGGAAVIGLVKLVVKTI-PGVAFSITAMVAAMVWGPIAFSLTRMYQRLVGETGT 410
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 176.8 |
| Seed ortholog evalue | 2.8e-41 |
| Seed eggNOG ortholog | 2880.D7FW23 |
| Preferred name | NTT6 |
| Hectar predicted targeting category | signal anchor |
| EggNOG free text desc. | TLC ATP/ADP transporter |
| EggNOG OGs | 2CHKX@1,2SD3X@2759 |
| COG Functional cat. | U |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| Exons | 6 |
| Model size | 2373 |
| Cds size | 1647 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig510.12393.1 >prot_H-paniculata_contig510.12393.1 ID=prot_H-paniculata_contig510.12393.1|Name=mRNA_H-paniculata_contig510.12393.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=549bp
MKHPGVRSLALGACLCSLYIGYELARACTISLFTKQKTNGLGGAVLALGG
CLLSLGSLAVYGRGVQLLGAAWTLFTSACVCSVVFVLCAVGLMWSPEGDE
AGALFRTLVSCTFAFREVYVSVMGTQIWALLSVELKARGPEMSRRWFCII
QGVSCMCSALAGLATGRMVTAKGEICLLLATATSLFTIAGTVGIMFCRIG
DADRCSVSSSTDETRGKPIGKPNGKKYSRTQVDGVKMRHLHDGEQRGGDG
QVEKVDRRLESGGLWQVLRSSAALFQRNPLLAALLAETIVCQILTAIMNM
SFNEAVRQSRMVETSLGSSARAAGFVGKSFAFIGLFSGVLQLVVMPWAMV
WVDLFLLLRGLPLVAGAGYSVSLLHPGFRTATAAFAVTKILDYSIRGTAL
ELVYQSMPEHERLLGKEAIATVGLRFGRTGAHMVLNLCSAALGGVLPQRV
LMALALVGASLWTLTLRQIKLLGGSTTVRGGRQDGVISMMKKGVVRGIHR
EVGGSGATRERHQRIVQPNNVGVHIVEVRKSLSLKATVVSLEKGRKEL* back to topmRNA from alignment at H-paniculata_contig510:29485..35298- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig510.12393.1 ID=mRNA_H-paniculata_contig510.12393.1|Name=mRNA_H-paniculata_contig510.12393.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5814bp|location=Sequence derived from alignment at H-paniculata_contig510:29485..35298- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GGAGGAAATAACAGAGGAAAATACCGCAGATATGGCCATTATATCATCAA
TTACCTGGGTTCAATACGGCTGATTTGTGGGAGTTTGGTGTTCAAAGGGC
AACCCTAATATAATGCGGCGAAACTTGGCCAATCACTGGCATCAAGGTCT
GCGGGATGACTACTTGAGGCCACGAACGCGATCGACTATGGACTTGTTGA
AAGCAACAGCAGCCGCACCGCCGTACCATCACAATGACAGGAAAGAGGCC
CTCTTAGAGCAGAAATGAAGCACCCCGGGGTTCGATCGCTGGCTCTCGGG
GCGTGCTTGTGCTCACTGTACATTGGCTACGAGTTAGCTCGGGCGTGCAC
GATCAGCTTGTTCACCAAACAGAAGACGAACGGCTTGGGAGGGGCTGTTC
TGGCATTGGGAGGATGTCTGCTAAGCCTGGGGTCATTAGCCGTGTATGGC
CGCGGTGTACAACTGCTGGGCGCGGCTTGGACGCTTTTTACGAGTGCCTG
CGTGTGCTCTGTGGTTTTTGTTTTGTGTGCTGTGGGGCTGATGTGGTCGC
CAGAAGGTGACGAGGCGGGCGCTTTGTTCCGGACTCTGGTGTCTTGCACG
TTTGCCTTCCGTGAAGTGTATGTTTCGGTGATGGGAACGCAGATATGGGC
GTTGCTGAGCGTGGAGCTCAAGGCACGCGGGCCCGAGATGTCACGCCGCT
GGTTCTGTATAATTCAGGTGCGAAATTGTGTTGGTATATTCAGACTTTAT
CAGTGCCCTTGCAGCGTGGTGGGCAACACGGTGGCACATGTAATGCTGCA
TTAGACACGTGTACGCTTGACGTTTTGTGCGGAAATTTGAAACTGAAACG
GATGTTTCTTCAGTATTACATGCTTAGGCTGTCTCTTTTCCAAAGAGAAG
AGCGATTTTGGGTAGATACCCCAATAATTTTTTCACACTGGAGGGTCTGT
GATTACCTGAAATACTTGTTCGAACGCTGGTCATTGCCCATCACGCTTTT
TTCATGCCATAAAATCGATTTCACAGCAATCTGAGGATAAAGTGAAAAAA
AATGTTTTAGTTGGGTTTAGTTGTTGTTGGGTACATAAATCTGTTTTCTA
GGGGAATAAAATAGTGACTTTTAGGCAGCCAAAGGCGGTGAATAACAACC
TGTGATAAAGGAACACACCACTGTCCTGGTTGTAACAAGACGTAGTCCGG
GCCGTAGCTCTTCATTCACGAGCCCCGTATGCTCGATTTGAGTGGAATCA
GTCAAGAGCTGAAGAAGAGCCGATGGATGTGTTTTGTGAGCATGGCCAAG
ACAGGTGAAATGGGTTCAATGGCACTTGAACTTTTACCGTTTCTCATCTC
TTAATATGCAACTTGGTCCAGCTAGGGTTCATGTTTACACGGTACTGTAC
AATCATACAGTCCAGTCAGTACGGTACGGAACTCGGTCACTTGGAAGTAA
CGAACGCGAGACGCAGAAAGCGAGATAATCGACCCAGGTATCTTACTGAA
CGCGGCACAGGCTGTACCCGCACGGATTTGACCAATTCCTGAGTCGCTGT
CTGCCTATGGAGCTTTGTGCGGTTTCACACCCCAAAATGCCCCAAAAACT
CAGGATGGTCGAAAAAGGTGGGTGGCTTTAGTCTGATGTCTCGCCCCCAC
AGCGATTCTCTCTAATTTTTTAGATGCTCAGGGCGTCTTGCTCATATGCC
AAACTATTTTGTGTTACAGTTGGCCATTTCTGGGGCACTTTTTTGGCTAA
TCTGGCTTTCTCATTGCTTGAAATGGGACGTAGGTACGGTATCACTGATA
TTTCGTATCTGGTCTATGGTGCGACAGCAAAACTTATTCACACGGGCAGC
TTGAGACCTCCCCATACCCCCCTCCTGGCGCGTTGTTGTCTTTAGTGCCG
AAGGGGTCCTGGGTACTGGACAAAAATCTTCAACTTGGCTTGCCGTTATT
GGCAGCACCTATGGATGATGACAAATAATGCGCCCCCTAACAGCGTACCA
TCCGAATGCCTTCTGTGATGGTATTTTCCCCTTTATTCTGAATACAGCGT
AGGTGTATGCAAGTTTATGTCAAATGGTTTCCAAAAATAGATGCAATTTA
CCATCATATTGCGGTCGTTCGTCGTCATACAGAAACGTAGGTCCTCCCGC
TGGTGGCATACTCGACCCAAGCCAATCACATCATGCGTGGTTGATCTGAA
AGGTACCTCTCGGGCGGTCAAACGTTATTTCGGAGACAGTGCAGATCACG
CGTTCAACGTTTCGTTTACGTTTCGGTTTTGATGCTCTGTTAGTTTGTCA
CGACGCGACGTGAATAAGATTGCAAAATACACGAGCTGAGCTCCTCACAA
CAAACCTATCATTGTCAATGAAGGTGCCAGGCAAGAAACTTCCTCGATTG
TTATCCCATTCTGGGCCTGGGAAATGACCTTTCGTTGTACTGAACAGCAC
AATACCCTATTTCAGTGTTTACATCGCCATGGTGTATGATTTTTTTCTGT
CGCATGCGACTCGTATGCAGATCAGATGCTTACAAGAGTTTGACATTGAG
CTATCATGCGTCTTATTGAAGTCACAGGGGCTCTCTTGTGTGCCGAAGAC
GCCAAGGTCTCGTACCAAATCAATCCTGAGCTCATGTGAGGGCTCAGGCT
CCTTTTGATACCTCGTTTTGGGGCCCAAAACCCTGAGCGTTCCGACCTGG
GATCATGATTCAGATTGAAATTTGGGGAAAGTGCCATACGACGCACCCAA
ACCCTAACCCCAATGGTGGTAGCCACAAACACGCGAATCTTCCATGGTTC
TATCCTGCTGTATTGTAGTGACCTGAAAAGCTTTCGTCGAAACGCCGACA
CGATTCCCTCTTCATATCCCCACGCAAACGTAGGGAGTATCGTGCATGTG
CAGTGCTTTGGCTGGACTGGCCACCGGAAGGATGGTGACTGCCAAGGGTG
AGATCTGTCTTCTCCTGGCCACGGCAACCTCTCTTTTCACGATAGCCGGC
ACAGTGGGCATCATGTTTTGTCGTATCGGTGACGCTGACAGATGTTCGGT
ATCTAGCTCCACGGATGAGACACGGGGAAAGCCAATCGGCAAGCCAAATG
GGAAGAAGTATTCTCGAACGCAAGTTGATGGTGTGAAGATGAGGCATCTA
CACGATGGTGAACAGCGTGGTGGTGATGGACAGGTAGAGAAGGTGGATCG
CCGACTAGAAAGTGGTGGGCTCTGGCAAGTGCTAAGGTGTGTGTATGCGG
TAAAGGCACGTGCGGACACGATAGCGTAGTAGTCACAGAGTGCATATGTG
ACACGTGTGACAAGCATCGCCCCCGGTGCCGACGCGGGCAGCAATTGCAC
CTGTGCAAGCAGAGGAGATTGTTTTAGGTGTGCTACTACAAGTGGGGGGC
ATGCTTTTTGTACCACCAAAATATGCCGCCAGTAAAACTTGTGTAGTGAT
ACATGTCGCGTAGTAGTAGGGCGCCATTAGCCGCTCGTCATCGTGGAGAG
ACCGAATCGATGAAAAGAGGGCACCGTTTGACGGAGATACAGCTGATAGT
GATGCCTTTGCGTACTTGTGGTTGGCAAACTTTGTTTCACACGCTTACTT
CATCTCCTCTATTTCCGTTTTGTTCCCCTTTGCCACAGATCAAGTGCGGC
TTTATTCCAACGAAATCCGCTGCTTGCGGCATTACTGGCGGAAACCATTG
TTTGTCAGGTACGTTGATACACTTGCAAAAATATAGCAATATCTTGTGTT
TTTTTTGTTCTATTTACTGTGGCAAGCAGCGAGTGCGGTAGAATGTAATC
GAGCTGTACGGTCAAAAGGATTTTTCTTAATCGGTGTGTGAGCTGATCGT
CTCCAGCCAAAAGTCATCACGCCAAAATGCGGCTAACAGTACCTGGAAAA
TGACAATGAACTTGAAATCAGATCCTAACCGCAATCATGAACATGAGCTT
CAACGAGGCCGTGAGACAAAGCCGCATGGTGGAGACTTCTTTGGGTTCCA
GTGCGCGAGCGGCCGGCTTCGTCGGCAAATCTTTCGCTTTCATTGGGTGA
GCTTTTGACCTCGTTTGTATTCGCGAAGATGTGCACCAAATGATGGTGAA
ACCACAAGGCAAAATGATGATAGTCGGCTACTGTGCAATTTAGGATTTGC
AAAGTTTGTGGCCTATGGGGTTCAATAGAGTTGCGGGGATTTTACATACA
TCAAGGTGAGTATTGACGCAGCTGCCAAGCTGTCTCATTTTGCCTAAGTT
ACACAGTAAAAACTGTCGAGTCCACCTTCTGCCACTTTGCAGTGTTGCCC
ACGATCCGTGGTGCGTGTCCAGTGAAGGTATCAAGGCCCAAACACCCCTC
ACCTGAGCACGCCTGGACCCCTCTACAAGCCTTGAATTGTGTATTCGCCC
TGCTCTCCACCAAATCATTTGCTATACAACCACAGGCTTTTTTCGGGCGT
TTTGCAACTAGTGGTGATGCCGTGGGCAATGGTGTGGGTCGATCTGTTCC
TGCTTTTAAGAGGGCTACCCTTAGTGGCGGGTGCGGGATATAGCGTGTCG
CTCTTACATCCTGGGTTTCGAACAGCGACTGCGGCGTTCGCCGTTACAAA
GATCCTCGACTACAGCATCAGGGGGACTGCCCTTGAGTTGGTGTATCAGT
CCATGCCTGAGCACGAACGTCTTCTAGGCAAGAGGAGCTGAGCATGTTGA
ACGTCGTGTGGATGCTACGTTAGAGGTCATTGCAGTCTGACCTGTATTTT
GGCATGTGATCGAACGGAGTACAGGTAACATGCTTTATATTTGTTTGGTA
GCTAGGTCCCTTGGGATGTTGTACTACATGTCTGCTACAACCGCTCAACA
CCGCAGCAGCTGAACTGAAAGCCAAACCCATGAATATCTGATCTGTTTTC
ACTTTTCGTTTATCTACTTTTCCCCCGTTCCTTCCTCCCTCCGATTAGGT
AAGGAGGCGATTGCCACTGTCGGGTTGAGATTTGGCCGAACTGGAGCTCA
CATGGTGCTAAACCTGTGCTCCGCAGCACTGGGTGGTGTCCTCCCACAAC
GAGTCCTCATGGCACTCGCCCTGGTGGGAGCAAGCCTCTGGACACTGACG
CTACGTCAGATAAAGCTTTTGGGTGGTTCTACAACAGTTCGCGGTGGTCG
ACAGGACGGTGTAATTTCTATGATGAAAAAGGGAGTTGTACGTGGGATTC
ATCGTGAAGTAGGAGGCAGTGGTGCAACTAGGGAGCGGCACCAACGAATT
GTTCAGCCCAATAATGTCGGGGTTCATATTGTTGAAGTTAGAAAAAGTTT
GTCGCTTAAAGCGACAGTAGTGTCACTTGAGAAGGGTCGCAAGGAATTAT
AGCGCACTTTGGGAGTAAGGTTATCGTCGTTGGGGCAAGTTTATGTTGGA
ATACATGGTCCAGTACAGACGCAAGTCCGCAGTGCAATACGACTAGTGGC
ATTGACAGTTCCACATCGAAAAAGTAGGGTGGGGTACATGCTTTGACGGA
CAGATTTATTTTAACAAGATGTAAATGAAGCTTAGCCGTCGACAAATATA
TGACGTGGTTTAGTTGTTCATATGAAGGTATAAGAAATATATATTTTCAT
TTGGATATGTTCACGTTCGTGAGGTTGAGTAGAGCGGTGAGTACTTGACG
CTAAAGTGGGATTGGTGACAGATAAGAGTAAAATGGTAACGTACGACTTC
AGTAGTATTGTCATAGAAGAAAAACAACATGTTGTAGAGGCGAATTGATG
GTGACATCAAATAAAAATTTACAAGCGCAGCAACAAAACTTATGATACCC
CCATTTATAGCTGG back to topCoding sequence (CDS) from alignment at H-paniculata_contig510:29485..35298- >mRNA_H-paniculata_contig510.12393.1 ID=mRNA_H-paniculata_contig510.12393.1|Name=mRNA_H-paniculata_contig510.12393.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3294bp|location=Sequence derived from alignment at H-paniculata_contig510:29485..35298- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAAGCACCCCGGGGTTCGATCGCTGGCTCTCGGGGCGTGCTTGTGCTC
ACTGTACATTGGCTACGAGTTAGCTCGGGCGTGCACGATCAGCTTGTTCA
CCAAACAGAAGACGAACGGCTTGGGAGGGGCTGTTCTGGCATTGGGAGGA
TGTCTGCTAAGCCTGGGGTCATTAGCCGTGTATGGCCGCGGTGTACAACT
GCTGGGCGCGGCTTGGACGCTTTTTACGAGTGCCTGCGTGTGCTCTGTGG
TTTTTGTTTTGTGTGCTGTGGGGCTGATGTGGTCGCCAGAAGGTGACGAG
GCGGGCGCTTTGTTCCGGACTCTGGTGTCTTGCACGTTTGCCTTCCGTGA
AGTGTATGTTTCGGTGATGGGAACGCAGATATGGGCGTTGCTGAGCGTGG
AGCTCAAGGCACGCGGGCCCGAGATGTCACGCCGCTGGTTCTGTATAATT
CAGATGAAGCACCCCGGGGTTCGATCGCTGGCTCTCGGGGCGTGCTTGTG
CTCACTGTACATTGGCTACGAGTTAGCTCGGGCGTGCACGATCAGCTTGT
TCACCAAACAGAAGACGAACGGCTTGGGAGGGGCTGTTCTGGCATTGGGA
GGATGTCTGCTAAGCCTGGGGTCATTAGCCGTGTATGGCCGCGGTGTACA
ACTGCTGGGCGCGGCTTGGACGCTTTTTACGAGTGCCTGCGTGTGCTCTG
TGGTTTTTGTTTTGTGTGCTGTGGGGCTGATGTGGTCGCCAGAAGGTGAC
GAGGCGGGCGCTTTGTTCCGGACTCTGGTGTCTTGCACGTTTGCCTTCCG
TGAAGTGTATGTTTCGGTGATGGGAACGCAGATATGGGCGTTGCTGAGCG
TGGAGCTCAAGGCACGCGGGCCCGAGATGTCACGCCGCTGGTTCTGTATA
ATTCAGGGAGTATCGTGCATGTGCAGTGCTTTGGCTGGACTGGCCACCGG
AAGGATGGTGACTGCCAAGGGTGAGATCTGTCTTCTCCTGGCCACGGCAA
CCTCTCTTTTCACGATAGCCGGCACAGTGGGCATCATGTTTTGTCGTATC
GGTGACGCTGACAGATGTTCGGTATCTAGCTCCACGGATGAGACACGGGG
AAAGCCAATCGGCAAGCCAAATGGGAAGAAGTATTCTCGAACGCAAGTTG
ATGGTGTGAAGATGAGGCATCTACACGATGGTGAACAGCGTGGTGGTGAT
GGACAGGTAGAGAAGGTGGATCGCCGACTAGAAAGTGGTGGGCTCTGGCA
AGTGCTAAGGGAGTATCGTGCATGTGCAGTGCTTTGGCTGGACTGGCCAC
CGGAAGGATGGTGACTGCCAAGGGTGAGATCTGTCTTCTCCTGGCCACGG
CAACCTCTCTTTTCACGATAGCCGGCACAGTGGGCATCATGTTTTGTCGT
ATCGGTGACGCTGACAGATGTTCGGTATCTAGCTCCACGGATGAGACACG
GGGAAAGCCAATCGGCAAGCCAAATGGGAAGAAGTATTCTCGAACGCAAG
TTGATGGTGTGAAGATGAGGCATCTACACGATGGTGAACAGCGTGGTGGT
GATGGACAGGTAGAGAAGGTGGATCGCCGACTAGAAAGTGGTGGGCTCTG
GCAAGTGCTAAGATCAAGTGCGGCTTTATTCCAACGAAATCCGCTGCTTG
CGGCATTACTGGCGGAAACCATTGTTTGTCAGATCAAGTGCGGCTTTATT
CCAACGAAATCCGCTGCTTGCGGCATTACTGGCGGAAACCATTGTTTGTC
AGATCCTAACCGCAATCATGAACATGAGCTTCAACGAGGCCGTGAGACAA
AGCCGCATGGTGGAGACTTCTTTGGGTTCCAGTGCGCGAGCGGCCGGCTT
CGTCGGCAAATCTTTCGCTTTCATTGGATCCTAACCGCAATCATGAACAT
GAGCTTCAACGAGGCCGTGAGACAAAGCCGCATGGTGGAGACTTCTTTGG
GTTCCAGTGCGCGAGCGGCCGGCTTCGTCGGCAAATCTTTCGCTTTCATT
GGGCTTTTTTCGGGCGTTTTGCAACTAGTGGTGATGCCGTGGGCAATGGT
GTGGGTCGATCTGTTCCTGCTTTTAAGAGGGCTACCCTTAGTGGCGGGTG
CGGGATATAGCGTGTCGCTCTTACATCCTGGGTTTCGAACAGCGACTGCG
GCGTTCGCCGTTACAAAGATCCTCGACTACAGCATCAGGGGGACTGCCCT
TGAGTTGGTGTATCAGTCCATGCCTGAGCACGAACGTCTTCTAGGCTTTT
TTCGGGCGTTTTGCAACTAGTGGTGATGCCGTGGGCAATGGTGTGGGTCG
ATCTGTTCCTGCTTTTAAGAGGGCTACCCTTAGTGGCGGGTGCGGGATAT
AGCGTGTCGCTCTTACATCCTGGGTTTCGAACAGCGACTGCGGCGTTCGC
CGTTACAAAGATCCTCGACTACAGCATCAGGGGGACTGCCCTTGAGTTGG
TGTATCAGTCCATGCCTGAGCACGAACGTCTTCTAGGTAAGGAGGCGATT
GCCACTGTCGGGTTGAGATTTGGCCGAACTGGAGCTCACATGGTGCTAAA
CCTGTGCTCCGCAGCACTGGGTGGTGTCCTCCCACAACGAGTCCTCATGG
CACTCGCCCTGGTGGGAGCAAGCCTCTGGACACTGACGCTACGTCAGATA
AAGCTTTTGGGTGGTTCTACAACAGTTCGCGGTGGTCGACAGGACGGTGT
AATTTCTATGATGAAAAAGGGAGTTGTACGTGGGATTCATCGTGAAGTAG
GAGGCAGTGGTGCAACTAGGGAGCGGCACCAACGAATTGTTCAGCCCAAT
AATGTCGGGGTTCATATTGTTGAAGTTAGAAAAAGTTTGTCGCTTAAAGC
GACAGTAGTGTCACTTGAGAAGGGTCGCAAGGAATTATAGGTAAGGAGGC
GATTGCCACTGTCGGGTTGAGATTTGGCCGAACTGGAGCTCACATGGTGC
TAAACCTGTGCTCCGCAGCACTGGGTGGTGTCCTCCCACAACGAGTCCTC
ATGGCACTCGCCCTGGTGGGAGCAAGCCTCTGGACACTGACGCTACGTCA
GATAAAGCTTTTGGGTGGTTCTACAACAGTTCGCGGTGGTCGACAGGACG
GTGTAATTTCTATGATGAAAAAGGGAGTTGTACGTGGGATTCATCGTGAA
GTAGGAGGCAGTGGTGCAACTAGGGAGCGGCACCAACGAATTGTTCAGCC
CAATAATGTCGGGGTTCATATTGTTGAAGTTAGAAAAAGTTTGTCGCTTA
AAGCGACAGTAGTGTCACTTGAGAAGGGTCGCAAGGAATTATAG back to top
|