prot_H-paniculata_contig5097.12385.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5097.12385.1
Unique Nameprot_H-paniculata_contig5097.12385.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length228
Homology
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BLAST of mRNA_H-paniculata_contig5097.12385.1 vs. uniprot
Match: A0A6H5JDI9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDI9_9PHAE)

HSP 1 Score: 55.5 bits (132), Expect = 2.450e-5
Identity = 29/53 (54.72%), Postives = 40/53 (75.47%), Query Frame = 0 
Query:   60 EHLDPLPDLPDT-NEGFFNRD-LDFQYPTAPVENP-FPTWGNVSSTNLAAMSA 109
            E LDPLP+LP++ +E FF ++ L+FQYPT P ENP FPTWG+  +  +AA+ A
Sbjct:    7 EELDPLPELPESADERFFTKEALEFQYPTGPAENPLFPTWGSTGA-EMAAIGA 58
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5097.12385.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JDI9_9PHAE2.450e-554.72Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5097contigH-paniculata_contig5097:6891..8452 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5097.12385.1mRNA_H-paniculata_contig5097.12385.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5097 6891..8452 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5097.12385.1 ID=prot_H-paniculata_contig5097.12385.1|Name=mRNA_H-paniculata_contig5097.12385.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=228bp
MNRTNTLEPSTRPPPYTQMTGADACLSPLHFTEMVDSATDSGVDNENALQ
QRSNFIDILEHLDPLPDLPDTNEGFFNRDLDFQYPTAPVENPFPTWGNVS
STNLAAMSATAAAASTATPAVMATPMITSTSVTGMVDSTPLPCPNPRPLL
SEPIHAVPYAPPVASAAAGICSPPERHVFLRQRLGGESVSSGNSSTSTSS
DTGSASDDATLAGEWESRRGVAGGGVAR
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