mRNA_H-paniculata_contig5096.12384.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig5096.12384.1 vs. uniprot
Match: A0A6H5L6M0_9PHAE (GDT1 family protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6M0_9PHAE) HSP 1 Score: 392 bits (1007), Expect = 2.830e-128 Identity = 239/349 (68.48%), Postives = 272/349 (77.94%), Query Frame = 3
Query: 90 GLLFLAGVPTVRGFIPYAVMPTKPVRSFNLPSRAHVSRTSPISRFQRHPRSEAGCALFMSLGTDSEQHNGPTFMEKERPLRQMRGLLGLRRLNGCGKVALLSFAAAATSQILPLLAVA-DEGAYPLASSALDGTLMESLTNSGFFQAFSLVFVSEIGDKTFFIAALLAAKTSRLISFAGSVGALAVMTVLAVALGLAFHSVPSTFTSGLPVDDIIAAAAFLYFGLITLKDAYELPSDSNEGIEEEKAEAEESVKEVEGKKTVWALILQTFSLVFAAEFGDRSFLTTIALGAAQSPVGVATGAIAAHASATGIAVTGGAYLSQFISEKVIGYIGGTLFVIFAVTTALGLF 1133
GL AG+ V GF+ + V+P S ++ S + + P+ R R A LFM G + +G E+ R R + +G G KVALL+ A A + Q+LP AVA E A P+AS+A+DGTL+E LT+SGFFQAFSLVFVSEIGDKTFFIAALLAAKTSRLISFAGSVGALAVMTVLAV LGLAFHSVPS FTSGLP+DDIIAAAAFLYFG+ TLKDAY LP DSN+GIEEE+AEAEESVKE+EGKKTVWALILQTFSLVFAAEFGDRSFLTTIALGAAQ+P GVA+GAI AHASATGIAVTGGA LSQ+ISEKVIGYIGG LFV+FAVTTA+G+F
Sbjct: 7 GLACFAGIAHVSGFVSH-VIPRGSRVSHDVSS---LVASRPLPRPYRPTAGRANSNLFMKKGGAHLREHG----ERNRT-RHLTSRIG--HPGGLHKVALLALAGAVSCQLLPHAAVAATETAVPIASAAVDGTLVERLTSSGFFQAFSLVFVSEIGDKTFFIAALLAAKTSRLISFAGSVGALAVMTVLAVLLGLAFHSVPSVFTSGLPLDDIIAAAAFLYFGINTLKDAYALPDDSNQGIEEERAEAEESVKELEGKKTVWALILQTFSLVFAAEFGDRSFLTTIALGAAQNPFGVASGAIVAHASATGIAVTGGALLSQYISEKVIGYIGGALFVVFAVTTAIGIF 344
BLAST of mRNA_H-paniculata_contig5096.12384.1 vs. uniprot
Match: A0A836CPU7_9STRA (GDT1 family protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPU7_9STRA) HSP 1 Score: 282 bits (721), Expect = 1.750e-85 Identity = 182/319 (57.05%), Postives = 214/319 (67.08%), Query Frame = 3
Query: 207 SPISRFQRHPRSEAGCALFMSLGTDSEQHNGPTFMEKERPLRQMRGLLGLRRLNGCGKVALLSFAAAAT-SQILPLLAVADEGA-YPLASSALDGTLMESLTNSGFFQAFSLVFVSEIGDKTFFIAALLAAKTSRLISFAGSVGALAVMTVLAVALGLAFHSVPSTFTSGLPVDDIIAAAAFLYFGLITLKDAYELPSDSNEGIEEEKAEAEESVKEVE--------GKKTVWALILQTFSLVFAAEFGDRSFLTTIALGAAQSPVGVATGAIAAHASATGIAVTGGAYLSQFISEKVIGYIGGTLFVIFAVTTALGLF 1133
SP+++ R A + F+S G ++Q P K R L R G + AA A S LP A A A PL + DGTL E+ T++GF QAFSLVFVSEIGDKTFFIA LLAAKTSRLISFAGS+ AL+VMTVL+ +G+AFHSVPST T+G+P DD IA AAFLYFGL+TL+DA ++P D N G+E E A G + ALI QTF LVFAAEFGDRSFLTTIAL AAQ+P+ VA GAIAAHASATGIAV GGA LSQ+ISEK++GYIGGTLF+IFA+TTALGLF
Sbjct: 46 SPLAKTWRR----AAKSYFLSGGGPAQQQRQPVAAAKG----SARSAAALSRRVGAQLSGVFLVAAVALLSHALPAAAAAAVTAGAPLTGAIADGTLTEA-TSNGFVQAFSLVFVSEIGDKTFFIAGLLAAKTSRLISFAGSIAALSVMTVLSCLIGVAFHSVPSTLTNGIPFDDYIAVAAFLYFGLVTLRDASQIPDDDNSGMEAEAAXXXXXXXXXXXXXXXXXXGAPSTLALIAQTFGLVFAAEFGDRSFLTTIALSAAQNPISVAGGAIAAHASATGIAVMGGALLSQYISEKLVGYIGGTLFIIFAITTALGLF 355
BLAST of mRNA_H-paniculata_contig5096.12384.1 vs. uniprot
Match: D8LPN6_ECTSI (GDT1 family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPN6_ECTSI) HSP 1 Score: 264 bits (674), Expect = 6.880e-80 Identity = 167/263 (63.50%), Postives = 193/263 (73.38%), Query Frame = 3
Query: 90 GLLFLAGVPTVRGFIPYAVMPTKPVRSFNLPSRAHVSRTSPISRFQRHPRSEAGCALFMSLGTDSEQHNGPTFMEKERPLRQMRGLLGLRRLNGCGKVALLSFAAAATSQILPLLAVA-DEGAYPLASSALDGTLMESLTNSGFFQAFSLVFVSEIGDKTFFIAALLAAKTSRLISFAGSVGALAVMTVLAVALGLAFHSVPSTFTSGLPVDDIIAAAAFLYFGLITLKDAYELPSDSNEGIEEEKAEAEESVKEVEGKKTVW 875
GL AG+ V GF+P+ V+P S ++ S SR P+ R R A +LFM+ G +G E+ R R + L+G G KVALL+ A A + Q+LP AVA E A P+AS+A+DGTL+E LT+SGFFQAFSLVFVSEIGDKTFFIAALLAAKTSRLISFAGSVGALAVMTVLAV LGLAFHSVPS FTSGLP+DDIIAAAAFLYFG+ TLKDAY LP DSN+GIEEE+AEAEESVKE+EGKKTVW
Sbjct: 7 GLACFAGIAHVSGFVPH-VIPRGSRASHDVSSLVVASR--PLPRPYRPTAGRANSSLFMNKGGAHLGEDG----ERNRT-RHLSSLMG--HPGGLHKVALLALAGAVSCQLLPHAAVAATETAVPIASAAVDGTLVERLTSSGFFQAFSLVFVSEIGDKTFFIAALLAAKTSRLISFAGSVGALAVMTVLAVLLGLAFHSVPSVFTSGLPLDDIIAAAAFLYFGINTLKDAYALPDDSNQGIEEERAEAEESVKELEGKKTVW 259
BLAST of mRNA_H-paniculata_contig5096.12384.1 vs. uniprot
Match: A0A7S2U7L4_9STRA (GDT1 family protein n=2 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2U7L4_9STRA) HSP 1 Score: 262 bits (670), Expect = 9.160e-78 Identity = 150/235 (63.83%), Postives = 183/235 (77.87%), Query Frame = 3
Query: 435 AVADEGAYPLASSALDGTLMESLTNSGFFQAFSLVFVSEIGDKTFFIAALLAAKTSRLISFAGSVGALAVMTVLAVALGLAFHSVPSTFTSGLPVDDIIAAAAFLYFGLITLKDAYELPSDSNEGIEEEKAEAEESVKEVEGKK--TVWALILQTFSLVFAAEFGDRSFLTTIALGAAQSPVGVATGAIAAHASATGIAVTGGAYLSQFISEKVIGYIGGTLFVIFAVTTALGLF 1133
AVA G +SA T ++SL+ +GF+QAFSLVFVSEIGDKTFFIA LLA KTSRLISF GS+GALAVMT+++V +G FH+VPS + GLP+DDI A AAF +FG+ TLK+A E+ + ++EE A+AEE+V+ + K T W I F LVFAAEFGDRSFL TIALGAAQ+PV VA GAIAAHA ATGIAV GGAYL++++SEKVIGYIGGTLF++FA TTALG+F
Sbjct: 137 AVAGLGEIVGGTSASAVTWLDSLSQTGFYQAFSLVFVSEIGDKTFFIAGLLAMKTSRLISFIGSIGALAVMTIISVLIGQIFHAVPSGLSQGLPLDDIAAVAAFAFFGIKTLKEAIEMDEEGVSAMDEEFADAEEAVEGSDSIKQITAWGKIASIFGLVFAAEFGDRSFLATIALGAAQNPVSVAGGAIAAHAMATGIAVAGGAYLAKYVSEKVIGYIGGTLFLVFAFTTALGIF 371
BLAST of mRNA_H-paniculata_contig5096.12384.1 vs. uniprot
Match: W7TMF8_9STRA (GDT1 family protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TMF8_9STRA) HSP 1 Score: 258 bits (659), Expect = 4.900e-76 Identity = 153/268 (57.09%), Postives = 193/268 (72.01%), Query Frame = 3
Query: 363 LNGCGKVALLSFAAAATSQILPLLAVADEGAYPLASSALDGT---------LMESLTNSGFFQAFSLVFVSEIGDKTFFIAALLAAKTSRLISFAGSVGALAVMTVLAVALGLAFHSVPSTFTSGLPVDDIIAAAAFLYFGLITLKDAYELPSDSNEGIEEEKAEAEESVKEVEG--KKTVWALILQTFSLVFAAEFGDRSFLTTIALGAAQSPVGVATGAIAAHASATGIAVTGGAYLSQFISEKVIGYIGGTLFVIFAVTTALGLF 1133
+ G KV + A A T +L +A GA+ ++S D T ++ L SGF QAFSLVFVSEIGDKTFFIA LLA KTSRLISF GS+ AL+VMT+++V +G AFH++P G D +A AAF YFGL TLKD+Y++ + G++EE+AEAE++V+E ++T W ILQ FSLVFAAEFGDRSFL+TIALGAAQ+P VATGAI AHA+ATGIAV GA+LS++ SEK+IGYIGGTLF+IFA+TTALG+F
Sbjct: 115 VKGFKKVGAVGLAVALTGIVL--IAGMPIGAHAASASLADLTAGASLSYNNVVAKLAASGFLQAFSLVFVSEIGDKTFFIAGLLAMKTSRLISFTGSMAALSVMTIISVLIGQAFHAIPQGLGGGFKFDQWVAVAAFSYFGLKTLKDSYDMADGDSSGVDEERAEAEKAVQESSAPERRTPWGTILQIFSLVFAAEFGDRSFLSTIALGAAQNPFSVATGAIGAHATATGIAVASGAFLSKYFSEKLIGYIGGTLFIIFALTTALGIF 380
BLAST of mRNA_H-paniculata_contig5096.12384.1 vs. uniprot
Match: A0A7S1CXU9_CYCTE (GDT1 family protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1CXU9_CYCTE) HSP 1 Score: 249 bits (637), Expect = 1.860e-73 Identity = 143/233 (61.37%), Postives = 184/233 (78.97%), Query Frame = 3
Query: 450 GAYPLASSALDGTLMESLTNSGFFQAFSLVFVSEIGDKTFFIAALLAAKTSRLISFAGSVGALAVMTVLAVALGLAFHSVPSTFTSGLPVDDIIAAAAFLYFGLITLKDAYELPSDSNEGIEEEKAEAEESVKEVEGKKTV-----WALILQTFSLVFAAEFGDRSFLTTIALGAAQSPVGVATGAIAAHASATGIAVTGGAYLSQFISEKVIGYIGGTLFVIFAVTTALGLF 1133
GA +AS+A +L +SLT +GF+QAFSLVF+SEIGDKTFFIA LLA KTSR++S+ GS+GALAVMT+L+V +G FH+VP+ G+P+DD+ A AF +FGL TLK+A E+ SD + ++EE AEAEE+V EG TV WA I+ TF LVFAAEFGDRSFL+TIAL AAQ+P+ VA GA+AAH ATGIAV+GG+Y+++++SEKVIG IGGTLF++FA TTA G+F
Sbjct: 105 GAISVASTA--ASLFDSLTETGFYQAFSLVFLSEIGDKTFFIAGLLAMKTSRVVSYLGSMGALAVMTILSVLIGQIFHAVPAGIAQGIPLDDVAAVLAFAFFGLKTLKEAIEMDSDGST-MDEEFAEAEETV---EGSNTVKQSTAWAQIVSTFVLVFAAEFGDRSFLSTIALSAAQNPLSVAGGAVAAHGLATGIAVSGGSYVAKYVSEKVIGLIGGTLFLVFAATTAFGIF 331
BLAST of mRNA_H-paniculata_contig5096.12384.1 vs. uniprot
Match: A0A7S2HML6_9STRA (GDT1 family protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HML6_9STRA) HSP 1 Score: 249 bits (635), Expect = 8.260e-73 Identity = 142/238 (59.66%), Postives = 182/238 (76.47%), Query Frame = 3
Query: 426 PLLAVADEGAYPLASSALDGTLMESLTNSGFFQAFSLVFVSEIGDKTFFIAALLAAKTSRLISFAGSVGALAVMTVLAVALGLAFHSVPSTFTSGLPVDDIIAAAAFLYFGLITLKDAYELPSDSNEGIEEEKAEAEESVKEVEG--KKTVWALILQTFSLVFAAEFGDRSFLTTIALGAAQSPVGVATGAIAAHASATGIAVTGGAYLSQFISEKVIGYIGGTLFVIFAVTTALGLF 1133
P LA LA+SA + ME + +GF+QAFSLVFVSEIGDKTFFIA LLA KTSR +S GSVGALAVMT+++V +G FH+VPS G+P+DD+ A AF +FG TLK+++++ + ++EE AEAEE+V+E + ++T WA I TF LVFAAEFGDRSFL+TIAL AAQ+PV VA GAIAAHA AT IAV+GG+Y++++ISEKVIG IGG+LF++FAVTTALG+F
Sbjct: 124 PTLAEVSTNGEALAASA--SSFMEKVAETGFYQAFSLVFVSEIGDKTFFIAGLLAMKTSRFVSLVGSVGALAVMTIISVLIGQIFHAVPSGIAQGIPLDDVAAVLAFAFFGFKTLKESFDM-EEGESVMDEELAEAEETVEESDTIRQRTAWAQIASTFGLVFAAEFGDRSFLSTIALSAAQNPVSVAGGAIAAHAIATAIAVSGGSYIAKYISEKVIGIIGGSLFLVFAVTTALGIF 358
BLAST of mRNA_H-paniculata_contig5096.12384.1 vs. uniprot
Match: A0A7S1FYG6_9STRA (GDT1 family protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FYG6_9STRA) HSP 1 Score: 245 bits (625), Expect = 2.680e-71 Identity = 144/259 (55.60%), Postives = 187/259 (72.20%), Query Frame = 3
Query: 375 GKVALLSFAAAATSQILPLLAVADEGAYPLASSALDG----TLMESLTNSGFFQAFSLVFVSEIGDKTFFIAALLAAKTSRLISFAGSVGALAVMTVLAVALGLAFHSVPSTFTSGLPVDDIIAAAAFLYFGLITLKDAYELPSDSNEGIEEEKAEAEESVKEVEGKKTV--WALILQTFSLVFAAEFGDRSFLTTIALGAAQSPVGVATGAIAAHASATGIAVTGGAYLSQFISEKVIGYIGGTLFVIFAVTTALGLF 1133
G+ ALL A AA + +A A+ + + + G + +ES ++GF+QAFSLVF+SEIGDKTFFIA LLA KTS+ +SF GS+GALAVMTV++ LG FH+VPS T GLP+DD+ A AF +FG TLKD+Y+L D ++EE A+AE++V+ E K V W I+ TF LVFAAEFGDRSFL+TIAL AAQ+P V GAIA HA AT IAV+GG+Y++++ISEKVIGYIGG LF++FA+TTA G+F
Sbjct: 105 GESALLKTAGAAAAAFAASSILASSPAHAIDVATIAGAPAASFIESFASTGFYQAFSLVFLSEIGDKTFFIAGLLAMKTSKFVSFVGSLGALAVMTVISCILGQIFHAVPSGITQGLPLDDVAAVVAFAFFGFKTLKDSYDL-EDGESVMDEELADAEDAVEGSETIKQVTPWGQIISTFGLVFAAEFGDRSFLSTIALSAAQNPFSVCGGAIAGHALATAIAVSGGSYIAKYISEKVIGYIGGALFLVFALTTAYGIF 362
BLAST of mRNA_H-paniculata_contig5096.12384.1 vs. uniprot
Match: A0A6S9LQ96_HETAK (GDT1 family protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9LQ96_HETAK) HSP 1 Score: 242 bits (618), Expect = 1.910e-70 Identity = 145/245 (59.18%), Postives = 166/245 (67.76%), Query Frame = 3
Query: 453 AYPLASSALDGTLM------------ESLTNSGFFQAFSLVFVSEIGDKTFFIAALLAAKTSRLISFAGSVGALAVMTVLAVALGLAFHSVPSTFTSGLPVDDIIAAAAFLYFGLITLKDAYELPSDSNEGIEEEKAEAEESVKEVE------GKKTVWALILQTFSLVFAAEFGDRSFLTTIALGAAQSPVGVATGAIAAHASATGIAVTGGAYLSQFISEKVIGYIGGTLFVIFAVTTALGLF 1133
A+P+AS A+DG+ E LT+SGFFQAFSLVFVSEIGDKTFFIA LLA KTS+ IS +G FH VP T GLP+DD A AAFLYFGL TLKDA LPS N G+EEE EAEE V+ + G ALI QTF LVFAAEFGDRSFLTTIALGAAQ+P VA GAIAAHASATG+AV GAYL+++ISEK +GY+ G LF++FA TTALG+F
Sbjct: 105 AFPMASMAIDGSTAIATIGTTAQAWNEQLTSSGFFQAFSLVFVSEIGDKTFFIAGLLAMKTSKFISXXXXXXXXXXXXXXXXLIGQVFHQVPPELTQGLPLDDYAAVAAFLYFGLKTLKDAAALPSGDNSGVEEELEEAEEEVEAFQKAAADRGAGAPLALIAQTFGLVFAAEFGDRSFLTTIALGAAQNPFAVAAGAIAAHASATGVAVLSGAYLTKYISEKAVGYVAGALFLVFAATTALGVF 349
BLAST of mRNA_H-paniculata_contig5096.12384.1 vs. uniprot
Match: A0A7S2K988_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K988_9STRA) HSP 1 Score: 241 bits (615), Expect = 2.490e-69 Identity = 137/237 (57.81%), Postives = 178/237 (75.11%), Query Frame = 3
Query: 459 PLASSALDG-------TLMESLTNSGFFQAFSLVFVSEIGDKTFFIAALLAAKTSRLISFAGSVGALAVMTVLAVALGLAFHSVPSTFTSGLPVDDIIAAAAFLYFGLITLKDAYELPSDSNEGIEEEKAEAEESVKEVEGKKTV-----WALILQTFSLVFAAEFGDRSFLTTIALGAAQSPVGVATGAIAAHASATGIAVTGGAYLSQFISEKVIGYIGGTLFVIFAVTTALGLF 1133
PL S ALD ++ + SGF+QAFSLVF+SEIGDKTFFIA LLA KTSRL+SF GS+GALA MTVL+V +G FH+VP+ G+P+DD+ A AF +FGL TLK+A ++ ++ ++EE EA+E+V EG +T+ W I+ TF+LVFAAEFGDRSFL+TIAL AAQ+P V GA+AAH ATGIAV GG+Y++++ISEKVIGYIGG+LF++FA+TTALG+F
Sbjct: 170 PLPSYALDSMSVADASAMVGRFSESGFYQAFSLVFLSEIGDKTFFIAGLLAMKTSRLVSFIGSMGALAAMTVLSVLIGQIFHAVPAGIAQGIPLDDVAAVLAFTFFGLKTLKEASDMDPEAGSVMDEEFEEAQEAV---EGSQTIKEITAWGQIVSTFALVFAAEFGDRSFLSTIALSAAQNPFSVGFGAVAAHGIATGIAVAGGSYVAKYISEKVIGYIGGSLFLVFALTTALGIF 403 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5096.12384.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig5096.12384.1 >prot_H-paniculata_contig5096.12384.1 ID=prot_H-paniculata_contig5096.12384.1|Name=mRNA_H-paniculata_contig5096.12384.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=357bp MKIVIPSGGLLFLAGVPTVRGFIPYAVMPTKPVRSFNLPSRAHVSRTSPIback to top mRNA from alignment at H-paniculata_contig5096:6520..14441+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig5096.12384.1 ID=mRNA_H-paniculata_contig5096.12384.1|Name=mRNA_H-paniculata_contig5096.12384.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=7922bp|location=Sequence derived from alignment at H-paniculata_contig5096:6520..14441+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig5096:6520..14441+ >mRNA_H-paniculata_contig5096.12384.1 ID=mRNA_H-paniculata_contig5096.12384.1|Name=mRNA_H-paniculata_contig5096.12384.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2142bp|location=Sequence derived from alignment at H-paniculata_contig5096:6520..14441+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |