prot_H-paniculata_contig5096.12383.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5096.12383.1
Unique Nameprot_H-paniculata_contig5096.12383.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length485
Homology
BLAST of mRNA_H-paniculata_contig5096.12383.1 vs. uniprot
Match: A0A6H5L673_9PHAE (Tyrosine--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L673_9PHAE)

HSP 1 Score: 757 bits (1954), Expect = 1.340e-272
Identity = 380/481 (79.00%), Postives = 419/481 (87.11%), Query Frame = 0
Query:    4 RSAVMLAALTTKTSAFLFPFSAGGRCIRTPSIALSTRVNRLLAVGTEVQAPPEISPEVVGDAASVKSPFLQTLVERGFYHQCTDVEGLDEKLSSGEVVKAYLGFDATADSLHVGSLLQIMILRHLQKAGHKPIVLVGGGTTKVGDPSGKDESRQLLDEASIQRNIDGLSSVFSKFLTFGDGSTDAQLVNNDTWLSKISYLHFLREYGPHFTINRMMTYDSVRLRLEREQPLTFLEFNYMLLQAYDFTELYRRYGCILQMGGSDQWGNMVNGVDLGRRIEKAELFALTAPLITTSEGKKMGKSASGAIWLNADKLPAYDYWQFWRNTNDADVIRFLKLFTELTKDEIGQLEQLKGVEINKAKIVLADEATKMLHGEACLSEIHQTVDQIFVGGVGGSNAALPRARITSAEAAAGISVIEMFLRLDLAKTKSEVRRLIKGGGAKLNDEKIADENLVVARPTFDSKGELKLSSGKKKHGIIFIE 484
            RS VMLA  +   S+   P     R   +      TRV RLLAV +E  A P        +  SVKSPFLQTLVERGFYHQCT+VEGLDEKL +GEVVKAYLGFDATADSLHVGSLLQIMILRHLQKAGH+PIVLVGGGTTK+GDPSGKDE+RQLLD+A+IQRNIDGL+SVFSKFLTFGDG TDA+LVNN+ WL+++SYL FLREYGPHFTINRMMTYDSVRLRLEREQPLTFLEFNYMLLQAYDFTELYRRYGC+LQMGGSDQWGNMVNGVDLGRR+EKAELFALTAPLITTSEGKKMGKSA+GA+WLNADKLP YDYWQFWRNT+DADVIRFLKLFTEL+ DE+ +LEQL G  INKAKIVLADE TK+LHGEACL EIHQTV Q+F GGVGGSNAALPRA+I SAEA AG++V+++F+RL+LAKTKSEVRRLIKGGGAKLND+KI DE  VV   TFD K ELKLSSGKK+HGIIF+E
Sbjct:   10 RSMVMLALCSVSRSSAFIPGGPAARRFYSTHALSRTRVGRLLAVESETVAVPASVTAEANEPVSVKSPFLQTLVERGFYHQCTNVEGLDEKLRAGEVVKAYLGFDATADSLHVGSLLQIMILRHLQKAGHQPIVLVGGGTTKIGDPSGKDEARQLLDDAAIQRNIDGLASVFSKFLTFGDGPTDAKLVNNNEWLNQLSYLDFLREYGPHFTINRMMTYDSVRLRLEREQPLTFLEFNYMLLQAYDFTELYRRYGCVLQMGGSDQWGNMVNGVDLGRRVEKAELFALTAPLITTSEGKKMGKSAAGAVWLNADKLPEYDYWQFWRNTDDADVIRFLKLFTELSMDEVHKLEQLTGAGINKAKIVLADETTKLLHGEACLKEIHQTVKQVFAGGVGGSNAALPRAKIESAEAEAGMAVVDLFIRLELAKTKSEVRRLIKGGGAKLNDQKIVDEGFVVDLSTFDGKDELKLSSGKKRHGIIFME 490          
BLAST of mRNA_H-paniculata_contig5096.12383.1 vs. uniprot
Match: A0A835Z418_9STRA (Tyrosine--tRNA ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z418_9STRA)

HSP 1 Score: 617 bits (1591), Expect = 3.670e-217
Identity = 310/458 (67.69%), Postives = 375/458 (81.88%), Query Frame = 0
Query:   31 RTPSIALSTRVNRLLAVGTEVQAPPEISPEVVG--DAASVKSPFLQTLVERGFYHQCTDVEGLDEKL--SSGEVVKAYLGFDATADSLHVGSLLQIMILRHLQKAGHKPIVLVGGGTTKVGDPSGKDESRQLLDEASIQRNIDGLSSVFSKFLTFGDGSTDAQLVNNDTWLSKISYLHFLREYGPHFTINRMMTYDSVRLRLEREQPLTFLEFNYMLLQAYDFTELYRRYGCILQMGGSDQWGNMVNGVDLGRRIEKAELFALTAPLITTSEGKKMGKSASGAIWLNADKLPAYDYWQFWRNTNDADVIRFLKLFTELTKDEIGQLEQLKGVEINKAKIVLADEATKMLHGEACLSEIHQTVDQIF-VGGVGGSNAALPRARITSAEAAAGISVIEMFLRLDLAKTKSEVRRLIKGGGAKLNDEKIADENLVVARPTFDSKGELKLSSGKKKHGIIFI 483
            RT  +A+S    +      E ++ P  +P   G  DA+SVKS FL+T++ RGF++QCTD+EGLD+KL  + G    AYLGFDATADSLHVGSL QIMILRHLQK GHKP+VLVGGGTTKVGDPSG+DESRQLLD+A+IQRN DG++SVF+KFLTFG+G++DA LV+ND WLS + Y+ FLREYGP+FTINRM+++DSVRLRLEREQPLTFLEFNYMLLQAYDF EL++RYGC LQMGGSDQWGNMVNGV+LGRR   AEL+ALTAPLITTS+G+KMGKSA+GA+WLNAD+LP YDYWQFWRNT+DADV RFLKLFTEL  + I +LE+L+G +IN AKIVLADEAT+MLHGE CL  I  T  Q+F  G  GGSNA+LPR  ++ +E  AG+SV++++++  LA +K EVRRLIKGGGAK+ND K+ DE  VV    F + GELKLSSGKKKH I+ I
Sbjct:   53 RTAKLAMSVAEGQ-----KETESIPATAPAASGLPDASSVKSAFLKTMISRGFFNQCTDLEGLDKKLLENGGVGFAAYLGFDATADSLHVGSLTQIMILRHLQKCGHKPLVLVGGGTTKVGDPSGRDESRQLLDDAAIQRNKDGITSVFNKFLTFGEGASDALLVDNDEWLSSLGYIQFLREYGPYFTINRMLSFDSVRLRLEREQPLTFLEFNYMLLQAYDFVELHKRYGCSLQMGGSDQWGNMVNGVELGRRTAGAELYALTAPLITTSDGRKMGKSAAGAVWLNADRLPPYDYWQFWRNTDDADVARFLKLFTELPLERIAELEKLEGKDINAAKIVLADEATRMLHGEHCLESIRATAKQLFEAGAAGGSNASLPRTSVSQSEVDAGLSVLDLYVKAGLAASKGEVRRLIKGGGAKINDVKVDDELQVVGAAEF-AGGELKLSSGKKKHAIVEI 504          
BLAST of mRNA_H-paniculata_contig5096.12383.1 vs. uniprot
Match: A0A7S2XYP8_9STRA (Tyrosine--tRNA ligase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XYP8_9STRA)

HSP 1 Score: 588 bits (1516), Expect = 7.540e-206
Identity = 292/460 (63.48%), Postives = 363/460 (78.91%), Query Frame = 0
Query:   32 TPSIALSTRVNRLLAVGTE----VQAPPEISPEVVGDAASVKSPFLQTLVERGFYHQCTDVEGLDEKLSSGEV----VKAYLGFDATADSLHVGSLLQIMILRHLQKAGHKPIVLVGGGTTKVGDPSGKDESRQLLDEASIQRNIDGLSSVFSKFLTFGDGSTDAQLVNNDTWLSKISYLHFLREYGPHFTINRMMTYDSVRLRLEREQPLTFLEFNYMLLQAYDFTELYRRYGCILQMGGSDQWGNMVNGVDLGRRIEKAELFALTAPLITTSEGKKMGKSASGAIWLNADKLPAYDYWQFWRNTNDADVIRFLKLFTELTKDEIGQLEQLKGVEINKAKIVLADEATKMLHGEACLSEIHQTVDQIFVGGVGGSNAALPRARITSAEAAAGISVIEMFLRLDLAKTKSEVRRLIKGGGAKLNDEKIADENLVVARPTFDSKGELKLSSGKKKHGIIFI 483
            TPS+ +S  + RLL+  TE    V++   ++ + V       SPFLQ + +RGF+HQCT++EGLD+ +  GE     V AYLGFDATADSLHVGSLLQIMILRHLQK GH+PIVLVGGGTTKVGDPSGKDESR++L E SIQ NIDG++ VF +FLTFG+  T+A LVNND WLS + YL FLR+YGP+FTINRMM Y+SV++RL+REQPLTFLEFNYM+LQAYDF EL RR+ CILQ+GGSDQWGN+VNG DL R+ ++  ++ LTAPLITTS+GKKMGK+A+GA+WLN +KL  Y+YWQFWRNTNDADV RFLKLFTEL+ +EI +L  ++G  IN+AK+VLADEAT+MLHG  CL  IH TV  +F G  G SN+AL    ++ AE  AGI V++++++L + KTKSE RRLIKGGGA+LNDEKI +E+LV+    FD   ++KLSSGKKKHGII I
Sbjct:   41 TPSLQVSRPITRLLSTSTEHGSSVESFIPVNADDVDSDYEPSSPFLQIMKKRGFFHQCTNLEGLDKAMLEGEKENKPVSAYLGFDATADSLHVGSLLQIMILRHLQKCGHRPIVLVGGGTTKVGDPSGKDESRKMLTEESIQANIDGIAKVFERFLTFGEQPTEALLVNNDEWLSPLQYLQFLRDYGPYFTINRMMNYESVKVRLDREQPLTFLEFNYMILQAYDFLELRRRHDCILQLGGSDQWGNIVNGCDLNRKADQHTVYGLTAPLITTSDGKKMGKTANGAMWLNKEKLSEYEYWQFWRNTNDADVARFLKLFTELSLEEIDKLTNVEGAAINQAKVVLADEATRMLHGADCLPAIHDTVQSMFAG-KGKSNSALQTVEVSQAEVDAGIPVVDLYMKLGMTKTKSEGRRLIKGGGARLNDEKITEEHLVILPEVFDEDQQIKLSSGKKKHGIIQI 499          
BLAST of mRNA_H-paniculata_contig5096.12383.1 vs. uniprot
Match: A0A7S4B398_CHRCT (Tyrosine--tRNA ligase n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4B398_CHRCT)

HSP 1 Score: 583 bits (1503), Expect = 2.600e-203
Identity = 296/456 (64.91%), Postives = 354/456 (77.63%), Query Frame = 0
Query:   26 GGRCIRTPSIALSTRVNRLLAVGTEVQAPPEISPEVVGDAASVKSPFLQTLVERGFYHQCTDVEGLDEKLSSGEVVKAYLGFDATADSLHVGSLLQIMILRHLQKAGHKPIVLVGGGTTKVGDPSGKDESRQLLDEASIQRNIDGLSSVFSKFLTFGDGSTDAQLVNNDTWLSKISYLHFLREYGPHFTINRMMTYDSVRLRLEREQPLTFLEFNYMLLQAYDFTELYRRYGCILQMGGSDQWGNMVNGVDLGRRIEKAELFALTAPLITTSEGKKMGKSASGAIWLNADKLPAYDYWQFWRNTNDADVIRFLKLFTELTKDEIGQLEQLKGVEINKAKIVLADEATKMLHGEACLSEIHQTVDQIFVGGVGGSNAALPRARITSAEAAAGISVIEMFLRLDLAKTKSEVRRLIKGGGAKLNDEKIADENLVVARPTFDSKGELKLSSGKKKHGII 481
            G R +  P+ +  T V   L       APP  + E V  AA +KS FL+TL  RGF HQ TD+E LDEKL +GE V AYLGFDATA SLHVGSLLQIM+LRH Q+ GHKPIVLVGGGTTKVGDPSGKD SRQLLDEA+IQ NIDG+S VFSKFLTFGDG TDA +VNND WLS + YL FLREYG HFTINRM+ ++SV+ RLERE PL+FLEFNYM+LQAYDF EL RR+  +LQ GGSDQWGN++NGV+LGRR++   LF LTAPL+TTS+GKKMGK+ASGA+WLNAD LP ++YWQ+WRN  DADV RFL++FTEL + EI +LE L G EIN+AK+VLA+E T+MLHGE C+ +I  T   +F GG      ALPR ++ +AE   G+ VI++F+ L+ AK+KSEVRRLI GGGAKLND KI   + VV R TF S+GELKLS+GKKKHGI+
Sbjct:   81 GSRILVRPTYSRMTGVRSSLE-HVRACAPPAEATEAVA-AADLKSEFLKTLQWRGFIHQATDMEALDEKLGAGEPVVAYLGFDATASSLHVGSLLQIMLLRHYQRCGHKPIVLVGGGTTKVGDPSGKDASRQLLDEAAIQSNIDGISQVFSKFLTFGDGPTDAIMVNNDEWLSPLRYLDFLREYGRHFTINRMLNFESVKQRLERESPLSFLEFNYMILQAYDFLELNRRHSAVLQFGGSDQWGNIINGVELGRRVDGVSLFGLTAPLLTTSDGKKMGKTASGAVWLNADLLPPFEYWQYWRNVADADVGRFLRIFTELPRAEIERLEALPGAEINEAKVVLANEVTRMLHGEECIEQIQATAAALFGGGNTADTDALPRIQVKAAEIGDGVPVIDLFVSLEFAKSKSEVRRLISGGGAKLNDAKIERADTVVTRDTF-SEGELKLSAGKKKHGIV 533          
BLAST of mRNA_H-paniculata_contig5096.12383.1 vs. uniprot
Match: A0A7S3XVK9_HETAK (Tyrosine--tRNA ligase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XVK9_HETAK)

HSP 1 Score: 569 bits (1466), Expect = 3.620e-198
Identity = 291/491 (59.27%), Postives = 362/491 (73.73%), Query Frame = 0
Query:    7 VMLAALTTKTSAFLFPFSAGGRCIRTPSIALSTRVNRLLAVGTEVQAPPEISPEVVGDAASVKSPFLQTLVERGFYHQCTDVEGLDEKLSSGEVVKAYLGFDATADSLHVGSLLQIMILRHLQKAGHKPIVLVGGGTTKVGDPSGKDESRQLLDEASIQRNIDGLSSVFSKFLTFGDGSTDAQLVNNDTWLSKISYLHFLREYGPHFTINRMMTYDSVRLRLEREQPLTFLEFNYMLLQAYDFTELYRRYGCILQMGGSDQWGNMVNGVDLGRRIEKAELFALTAPLITTSEGKKMGKSASGAIWLNADKLPAYDYWQFWRNTNDADVIRFLKLFTELTKDEIGQLEQLKGVEINKAKIVLADEATKMLHGEACLSEIHQTV-------DQIFVGGVGGSNAALPRARITSAE------AAAGISVIEMFLRLDLAKTKSEVRRLIKGGGAKLNDEKIADENLVVARPTFDSKGELKLSSGKKKHGIIFIE 484
            +++A   +   AF+ P  A    + T   + S+   R + + +  +   E + EV    A +KS FL+T+ +RGF+HQCTD+EGLD+K+S    VKAYLGFDATADSLHVGSLLQI+ILR+LQ+AGHKPIVLVGGGTTKVGDPSGKDE+R+LL EA IQRNIDG+S VF KFL FGDG TDA LVNND WLS+++YL FLR+YGPHFTINRM+ ++SVRLRLEREQPL+FLEFNYM+LQ YDF EL RRY   LQ+GGSDQWGN++NG+DL R++++ ++F LTAPLITTS+GKKMGKSA+GA+WLNADKLPAYDYWQFWRNT D DV+RF+KLFTEL  ++I     L G  IN AK+VLADEAT+MLHGEACL  I +                    + ALP   +   E         G+  ++++L+L  AK+K+E RRLIKGGGA+LND KI DEN VV    F + G LKLSSGKKKHGI+ ++
Sbjct:   17 IVMAVFISTARAFILP-RASRNVVHTAMSSPSSLRIRSVMMSSVAEQGSEQTKEVDILTAELKSDFLKTMRDRGFFHQCTDLEGLDKKMSEEGPVKAYLGFDATADSLHVGSLLQILILRNLQRAGHKPIVLVGGGTTKVGDPSGKDEARKLLTEADIQRNIDGISGVFRKFLAFGDGPTDALLVNNDEWLSELNYLQFLRDYGPHFTINRMLNFESVRLRLEREQPLSFLEFNYMILQGYDFLELSRRYDVALQLGGSDQWGNIINGIDLARKLDQKQVFGLTAPLITTSDGKKMGKSAAGAVWLNADKLPAYDYWQFWRNTADEDVVRFMKLFTELPLEQIEGYAALTGAAINDAKVVLADEATRMLHGEACLGPIKEAAAXXXXXXXXXXXXXXXADSGALPTVALAPGELGDEEGGTGGVPAVDLYLKLGFAKSKAEARRLIKGGGARLNDVKIEDENYVVGAGDF-TDGRLKLSSGKKKHGIVELQ 505          
BLAST of mRNA_H-paniculata_contig5096.12383.1 vs. uniprot
Match: A0A7S1TRV0_9STRA (Tyrosine--tRNA ligase n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TRV0_9STRA)

HSP 1 Score: 554 bits (1428), Expect = 2.460e-193
Identity = 276/445 (62.02%), Postives = 343/445 (77.08%), Query Frame = 0
Query:   43 RLLAVGTEVQAPPEISPEVVGDAASVKSPFLQTLVERGFYHQCTDVEGLDEKL----SSGEVVKAYLGFDATADSLHVGSLLQIMILRHLQKAGHKPIVLVGGGTTKVGDPSGKDESRQLLDEASIQRNIDGLSSVFSKFLTFGDGSTDAQLVNNDTWLSKISYLHFLREYGPHFTINRMMTYDSVRLRLEREQPLTFLEFNYMLLQAYDFTELYRRYGCILQMGGSDQWGNMVNGVDLGRRIEKAELFALTAPLITTSEGKKMGKSASGAIWLNADKLPAYDYWQFWRNTNDADVIRFLKLFTELTKDEIGQLEQLKGVEINKAKIVLADEATKMLHGEACLSEIHQTVDQIFVGGVGGSNAALPRARITSAEAAAGISVIEMFLRLDLAKTKSEVRRLIKGGGAKLNDEKIADENLVVARPTFDSKGELKLSSGKKKHGIIFI 483
            RL  +    +A PE +     D + VKS FL+ +V+RGF++QCTD+ GLD KL     +GE +KAYLGFDATA SLHVGSLLQIMILRHLQKAGH+P+VLVGGGTTKVGDPSGKDESR++L E  I  NI+G+S VF KFL FG+G +DA+LVNND WLS I+YL FLR++G HFTINRM+ +DSV+LRLEREQPLTFLEFNY +LQAYDF EL+ R+G  LQ+GGSDQWGN++NG++LGR++ KAELF LTAPLIT S+G KMGK+ASGA+WLN D L  YDYWQFWRN +DADV +FLK+FTEL  DEI +L  LKG EIN AK +LADEAT +LHG   + EI  T   +F GG G ++  LP     +  AA G  V+++++ L  AK+K E +RLIKGGGA++ND KI DE L ++   F+ +G+LKLSSGKKKHGI+ +
Sbjct:    6 RLARLAATTEAAPEETAAAAMDPSEVKSDFLRRMVDRGFFNQCTDLAGLDAKLLEAEKTGEPLKAYLGFDATASSLHVGSLLQIMILRHLQKAGHQPVVLVGGGTTKVGDPSGKDESRKMLSEQDIADNIEGISRVFRKFLAFGEGPSDAKLVNNDDWLSGINYLQFLRDFGRHFTINRMLGFDSVKLRLEREQPLTFLEFNYQILQAYDFVELHGRHGVDLQIGGSDQWGNIINGIELGRKVSKAELFGLTAPLITKSDGTKMGKTASGAVWLNEDLLTPYDYWQFWRNCDDADVGKFLKIFTELPLDEIERLASLKGKEINSAKEILADEATTLLHGADKIEEIKATAKALFAGG-GAADEGLP-----TVAAAEGTPVVDLYIELGFAKSKGEAKRLIKGGGARINDVKIEDEQLKISAGDFNDEGKLKLSSGKKKHGIVTL 444          
BLAST of mRNA_H-paniculata_contig5096.12383.1 vs. uniprot
Match: A0A7S0LKU6_9EUKA (Tyrosine--tRNA ligase n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LKU6_9EUKA)

HSP 1 Score: 554 bits (1427), Expect = 9.740e-193
Identity = 271/423 (64.07%), Postives = 338/423 (79.91%), Query Frame = 0
Query:   64 DAASVKSPFLQTLVERGFYHQCTDVEGLDEKLSSGEVVKAYLGFDATADSLHVGSLLQIMILRHLQKAGHKPIVLVGGGTTKVGDPSGKDESRQLLDEASIQRNIDGLSSVFSKFLTFGDGSTDAQLVNNDTWLSKISYLHFLREYGPHFTINRMMTYDSVRLRLEREQPLTFLEFNYMLLQAYDFTELYRRYGCILQMGGSDQWGNMVNGVDLGRRIEKAELFALTAPLITTSEGKKMGKSASGAIWLNADKLPAYDYWQFWRNTNDADVIRFLKLFTELTKDEIGQLEQLKGVEINKAKIVLADEATKMLHGEACLSEIHQTVDQIFVGGVGGS---NAALPRARITSAEAAAGISVIEMFLRLDLAKTKSEVRRLIKGGGAKLNDEKIADENLVVARPTFDSK--GELKLSSGKKKHGII 481
            +AA++KS FLQTL  RGF  Q TDVE LD  L+   VV AYLGFDATA SLHVGSLLQIM+LRH Q+ GHKP+VLVGGGTTKVGDPSGKD SRQLL + +I +NIDG+S VFS+FLTFGDG TDA LVNND WLS + YL FLR+YG HFTINRM++++SV+ RLERE PL+FLEFNYM+LQAYDF EL+RR G +LQ GGSDQWGN++NGV+LGRR++ A L+ LTAPL+ T++GKKMGK+ASGA+WLN + L  ++YWQFWRNT D+DV RFL++FTEL + EI +LE L G  +N AK+VLA+EAT+MLHG  CL +I QT   +F GG  G      ALPR +++S++ A G+ +I++FLRL+L K+KSE+RRL+ GGGAKLND K+ D  L+V   TF  +  GE+KLS+GKKKHGI+
Sbjct:   50 EAATLKSEFLQTLKWRGFIQQATDVEALDALLAEKTVV-AYLGFDATASSLHVGSLLQIMLLRHFQRCGHKPLVLVGGGTTKVGDPSGKDASRQLLTQEAIDKNIDGISQVFSRFLTFGDGPTDAVLVNNDDWLSPLKYLEFLRDYGRHFTINRMLSFESVKQRLERESPLSFLEFNYMILQAYDFLELHRREGAVLQFGGSDQWGNIINGVELGRRVDGASLYGLTAPLLATADGKKMGKTASGAVWLNEELLSPFEYWQFWRNTADSDVGRFLRIFTELPQGEIEKLESLSGAAVNDAKVVLANEATRMLHGAECLEQIQQTAASLFGGGGAGGAGDTEALPRVKVSSSDLAEGVPLIDLFLRLELGKSKSEIRRLVTGGGAKLNDVKVEDAALLVTPETFAGREMGEIKLSAGKKKHGIV 471          
BLAST of mRNA_H-paniculata_contig5096.12383.1 vs. uniprot
Match: A0A7S3C400_9EUKA (Tyrosine--tRNA ligase n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3C400_9EUKA)

HSP 1 Score: 551 bits (1421), Expect = 1.080e-192
Identity = 269/418 (64.35%), Postives = 334/418 (79.90%), Query Frame = 0
Query:   68 VKSPFLQTLVERGFYHQCTDVEGLDEKLSSGEVVKAYLGFDATADSLHVGSLLQIMILRHLQKAGHKPIVLVGGGTTKVGDPSGKDESRQLLDEASIQRNIDGLSSVFSKFLTFGDGSTDAQLVNNDTWLSKISYLHFLREYGPHFTINRMMTYDSVRLRLEREQPLTFLEFNYMLLQAYDFTELYRRYGCILQMGGSDQWGNMVNGVDLGRRIEKAELFALTAPLITTSEGKKMGKSASGAIWLNADKLPAYDYWQFWRNTNDADVIRFLKLFTELTKDEIGQLEQLKGVEINKAKIVLADEATKMLHGEACLSEIHQTVDQIF-VGGVGGSNAALPRARITSAEAAAGISVIEMFLRLDLAKTKSEVRRLIKGGGAKLNDEKIADENLVVARPTFDSKGELKLSSGKKKHGIIFIE 484
            +KS FL+T+  RGF  + TD++ LD++LS+G VV AYLGFDATA SLHVGSLLQIM+LRH QK GHKPIVL+GGGTTKVGDPSGKD SRQLL + +IQ+NIDG++SVFSKFL FGDG TDA LVNND WLS + YL FLR+YG HFTINRM++++SV+ RL RE PL+FLEFNYM+LQAYDF EL RR    LQ GGSDQWGN+VNGV+L RR+++ +++  TAPL+TTS+GKKMGK+A GA+WLNAD L  YDYWQFWRNT DADV RFL++FTEL K++I  +E+L G  IN+AK +LADEAT++LHGE CL +I +T   +F  GG     +ALPR +IT  E A G+ VI++F+RL+L K+KSEVRRL+ GGGA+LN EKI D  LV+    F    E+KLSSGKKKHGI+ ++
Sbjct:    1 LKSTFLETMRWRGFLKETTDIQTLDKELSTGRVV-AYLGFDATASSLHVGSLLQIMLLRHFQKCGHKPIVLIGGGTTKVGDPSGKDASRQLLTQEAIQKNIDGITSVFSKFLKFGDGDTDATLVNNDEWLSSLQYLDFLRDYGRHFTINRMLSFESVKQRLARESPLSFLEFNYMILQAYDFLELSRRMDVKLQFGGSDQWGNIVNGVELARRVDRRQVYGFTAPLLTTSDGKKMGKTADGAVWLNADLLSPYDYWQFWRNTADADVGRFLRIFTELPKEKIEAMEKLDGAAINEAKAILADEATRLLHGEECLDQIRETARTLFSTGGDASDTSALPRIQITPDEVAEGVGVIDLFIRLELGKSKSEVRRLVTGGGARLNGEKIEDAALVLDAEVFSESDEVKLSSGKKKHGIVELK 417          
BLAST of mRNA_H-paniculata_contig5096.12383.1 vs. uniprot
Match: A0A8J6C8V9_DIALT (Tyrosine--tRNA ligase n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6C8V9_DIALT)

HSP 1 Score: 551 bits (1420), Expect = 3.490e-192
Identity = 273/432 (63.19%), Postives = 340/432 (78.70%), Query Frame = 0
Query:   58 SPEVVGDAASVKSPFLQTLVERGFYHQCTDVEGLDEKLSSGEVVKAYLGFDATADSLHVGSLLQIMILRHLQKAGHKPIVLVGGGTTKVGDPSGKDESRQLLDEASIQRNIDGLSSVFSKFLTFGDGSTDAQLVNNDTWLSKISYLHFLREYGPHFTINRMMTYDSVRLRLEREQPLTFLEFNYMLLQAYDFTELYRRYGCILQMGGSDQWGNMVNGVDLGRRIEKAELFALTAPLITTSEGKKMGKSASGAIWLNADKLPAYDYWQFWRNTNDADVIRFLKLFTELTKDEIGQLEQLKGVEINKAKIVLADEATKMLHGEACLSEIHQTVDQIFVGGVG----GSNAA----LPRARITSAEAAAGISVIEMFLRLDLAKTKSEVRRLIKGGGAKLNDEKIADENLVVARPTFDSKGELKLSSGKKKHGII 481
            +P  V  +A+V S FL+ +  RG+ +QC+++  LD  L   E+V AYLGFDATA SLHVGSLLQIMILRHLQ+ GHKP+VLVGGGTTK+GDPSG+D +RQ+L +  I  NI G+S VF++FLTFGDG TDA LVNND WL ++  L FLR+YG +FTINRM+T++SV+ RL REQPLTFLEFNYM+ QAYDF EL RRYGC LQMGGSDQWGN+++GV+LGRR + A LFA+TAPLITT++GKKMGKS  GA+WLN D LP YDYWQFWRNT+DADV+RFL+LFTEL+ + I +L QL+G  IN+AK+VLADEAT+MLHG+ CL+ I QT  Q+F  G G    GS  A    LP   ++ AE   GI+V+E+FL+L+ AK+KSEVRRLI  GGA+LNDEK+ DE LVV    F + G+LK+SSGKKKHG++
Sbjct:    8 TPAPVDASAAVNSEFLRVMQSRGYLYQCSNLAELDA-LMCKEIVPAYLGFDATASSLHVGSLLQIMILRHLQRCGHKPVVLVGGGTTKIGDPSGRDTTRQMLTDEQIDANIAGISKVFARFLTFGDGPTDAVLVNNDEWLGQLRLLPFLRDYGRYFTINRMLTFESVKQRLGREQPLTFLEFNYMIFQAYDFLELSRRYGCRLQMGGSDQWGNIISGVELGRRADDASLFAVTAPLITTADGKKMGKSLGGAVWLNEDLLPPYDYWQFWRNTDDADVVRFLRLFTELSDERIAELAQLEGAAINEAKVVLADEATRMLHGDGCLAAIRQTAAQLFTNGGGXXXVGSGGADMGTLPTVAVSRAELDGGITVVELFLKLNFAKSKSEVRRLIAAGGARLNDEKVIDEALVVGSGAF-ADGQLKVSSGKKKHGLV 437          
BLAST of mRNA_H-paniculata_contig5096.12383.1 vs. uniprot
Match: W7T7T0_9STRA (Tyrosine--tRNA ligase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T7T0_9STRA)

HSP 1 Score: 554 bits (1428), Expect = 7.090e-192
Identity = 269/414 (64.98%), Postives = 334/414 (80.68%), Query Frame = 0
Query:   69 KSPFLQTLVERGFYHQCTDVEGLDEKLSSGEVVKAYLGFDATADSLHVGSLLQIMILRHLQKAGHKPIVLVGGGTTKVGDPSGKDESRQLLDEASIQRNIDGLSSVFSKFLTFGDGSTDAQLVNNDTWLSKISYLHFLREYGPHFTINRMMTYDSVRLRLEREQPLTFLEFNYMLLQAYDFTELYRRYGCILQMGGSDQWGNMVNGVDLGRRIEKAELFALTAPLITTSEGKKMGKSASGAIWLNADKLPAYDYWQFWRNTNDADVIRFLKLFTELTKDEIGQLEQLKGVEINKAKIVLADEATKMLHGEACLSEIHQTVDQIFVGGVGGSNAALPRARITSAEAA-AGISVIEMFLRLDLAKTKSEVRRLIKGGGAKLNDEKIADENLVVARPTFDSKGELKLSSGKKKHGII 481
            +S FLQTL  RG+ HQCTD + LDE  ++G+ + AYLGFDATA SLHVGSLLQIMILRHLQK+GHKP+VL+GGGTTKVGDPSGKDE+R+L+   +IQ NI  +S VF +FL FGDG+TDA LVNND WLS + YL FLR+YG HFTINRM+ ++SV++RL+RE PL+FLEFNYM+LQAYDF EL RRY   LQ+GGSDQWGN++NGV+L R+++   LF LTAPL+TTS+GKKMGK+ASGA+WL  + L  YDYWQFWRNTNDADV RFLKLFTE+  ++I +L +L+G  IN+AK++LADEATK+LHGE CL EIH TV  +F GG     AALPR  +T +E   AG+ V E+F+RLDLAK+K+E RRLIKGGGA+LN E+I +E  VV   +FD K E+ LS+GKKKHG++
Sbjct:  125 ESSFLQTLSARGYIHQCTDFKALDEACAAGKPIAAYLGFDATAPSLHVGSLLQIMILRHLQKSGHKPLVLMGGGTTKVGDPSGKDEARKLMTYETIQGNIASISEVFRRFLAFGDGATDALLVNNDEWLSPLRYLDFLRDYGQHFTINRMLNFESVKMRLDRESPLSFLEFNYMILQAYDFLELSRRYQARLQLGGSDQWGNIINGVELARKVDGRHLFGLTAPLMTTSDGKKMGKTASGAVWLKKELLSEYDYWQFWRNTNDADVTRFLKLFTEVPLEKIEELARLEGAGINEAKVILADEATKLLHGEECLKEIHATVANLFAGGSTEDTAALPRVVVTKSELGDAGVQVAELFVRLDLAKSKAEARRLIKGGGARLNGEQIKEETFVVTVDSFD-KPEIMLSAGKKKHGMV 537          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5096.12383.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L673_9PHAE1.340e-27279.00Tyrosine--tRNA ligase n=2 Tax=Ectocarpus TaxID=287... [more]
A0A835Z418_9STRA3.670e-21767.69Tyrosine--tRNA ligase n=1 Tax=Tribonema minus TaxI... [more]
A0A7S2XYP8_9STRA7.540e-20663.48Tyrosine--tRNA ligase n=1 Tax=Fibrocapsa japonica ... [more]
A0A7S4B398_CHRCT2.600e-20364.91Tyrosine--tRNA ligase n=1 Tax=Chrysotila carterae ... [more]
A0A7S3XVK9_HETAK3.620e-19859.27Tyrosine--tRNA ligase n=1 Tax=Heterosigma akashiwo... [more]
A0A7S1TRV0_9STRA2.460e-19362.02Tyrosine--tRNA ligase n=1 Tax=Phaeomonas parva Tax... [more]
A0A7S0LKU6_9EUKA9.740e-19364.07Tyrosine--tRNA ligase n=1 Tax=Coccolithus braarudi... [more]
A0A7S3C400_9EUKA1.080e-19264.35Tyrosine--tRNA ligase n=1 Tax=Haptolina ericina Ta... [more]
A0A8J6C8V9_DIALT3.490e-19263.19Tyrosine--tRNA ligase n=1 Tax=Diacronema lutheri T... [more]
W7T7T0_9STRA7.090e-19264.98Tyrosine--tRNA ligase n=1 Tax=Nannochloropsis gadi... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002307Tyrosine-tRNA ligasePRINTSPR01040TRNASYNTHTYRcoord: 287..299
score: 39.23
coord: 254..276
score: 40.43
coord: 233..248
score: 49.17
coord: 113..135
score: 39.71
IPR002307Tyrosine-tRNA ligaseTIGRFAMTIGR00234TIGR00234coord: 73..481
e-value: 2.9E-109
score: 363.8
IPR014729Rossmann-like alpha/beta/alpha sandwich foldGENE3D3.40.50.620coord: 47..293
e-value: 2.7E-84
score: 284.8
NoneNo IPR availableGENE3D1.10.240.10coord: 294..397
e-value: 5.4E-31
score: 108.9
NoneNo IPR availablePANTHERPTHR11766:SF0TYROSINE--TRNA LIGASE, MITOCHONDRIALcoord: 63..481
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..18
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..484
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..13
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..18
score: 0.574
NoneNo IPR availableSUPERFAMILY52374Nucleotidylyl transferasecoord: 71..386
NoneNo IPR availableSUPERFAMILY55174Alpha-L RNA-binding motifcoord: 404..482
IPR036986RNA-binding S4 domain superfamilyGENE3D3.10.290.10coord: 399..482
e-value: 1.2E-14
score: 56.0
IPR002305Aminoacyl-tRNA synthetase, class IcPFAMPF00579tRNA-synt_1bcoord: 100..392
e-value: 1.5E-71
score: 241.1
IPR024088Tyrosine-tRNA ligase, bacterial-typePANTHERPTHR11766TYROSYL-TRNA SYNTHETASEcoord: 63..481
IPR002942RNA-binding S4 domainPROSITEPS50889S4coord: 417..483
score: 8.971
IPR024107Tyrosine-tRNA ligase, bacterial-type, type 1HAMAPMF_02006Tyr_tRNA_synth_type1coord: 70..483
score: 41.004

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5096contigH-paniculata_contig5096:2650..6418 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5096.12383.1mRNA_H-paniculata_contig5096.12383.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5096 1548..6533 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5096.12383.1 ID=prot_H-paniculata_contig5096.12383.1|Name=mRNA_H-paniculata_contig5096.12383.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=485bp
MVTRSAVMLAALTTKTSAFLFPFSAGGRCIRTPSIALSTRVNRLLAVGTE
VQAPPEISPEVVGDAASVKSPFLQTLVERGFYHQCTDVEGLDEKLSSGEV
VKAYLGFDATADSLHVGSLLQIMILRHLQKAGHKPIVLVGGGTTKVGDPS
GKDESRQLLDEASIQRNIDGLSSVFSKFLTFGDGSTDAQLVNNDTWLSKI
SYLHFLREYGPHFTINRMMTYDSVRLRLEREQPLTFLEFNYMLLQAYDFT
ELYRRYGCILQMGGSDQWGNMVNGVDLGRRIEKAELFALTAPLITTSEGK
KMGKSASGAIWLNADKLPAYDYWQFWRNTNDADVIRFLKLFTELTKDEIG
QLEQLKGVEINKAKIVLADEATKMLHGEACLSEIHQTVDQIFVGGVGGSN
AALPRARITSAEAAAGISVIEMFLRLDLAKTKSEVRRLIKGGGAKLNDEK
IADENLVVARPTFDSKGELKLSSGKKKHGIIFIE*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002307Tyr-tRNA-ligase
IPR014729Rossmann-like_a/b/a_fold
IPR036986S4_RNA-bd_sf
IPR002305aa-tRNA-synth_Ic
IPR024088Tyr-tRNA-ligase_bac-type
IPR002942S4_RNA-bd
IPR024107Tyr-tRNA-ligase_bac_1