mRNA_H-paniculata_contig5092.12380.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig5092.12380.1 vs. uniprot
Match: D8LLC4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLC4_ECTSI) HSP 1 Score: 520 bits (1338), Expect = 9.550e-176 Identity = 307/380 (80.79%), Postives = 325/380 (85.53%), Query Frame = 1
Query: 40 ERWMEWEPEDNAWGAYVKFEMRQEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERALAELADSEKTEKFFSAFAHFEERCKEFDRARVIYKYALDQMPREQVPELYRDFIGFEKRHGSVEGIEEVIINNRRLQYEERASASPLDYDNWFDYLRLEESAGDVDRTREVYERAIANVPPVADKRYWRRYIYLWINYALFEELQAEXXXXXXXXXXACLDVVPHKSFTFAKVWLLLAKFEVRHKNLDAARKVLGQAIGMCPKERLFKGYVQLERDLGEIDRCRKIYRQAIYSFPSDCGAWAQFAALEGSVEETDRSRSVFELAIRQPVLDMPETLWKAYIDFEAENGETDNARQLFERLLDRTQHYKVGV 1179
ERWMEWEPEDNA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX RALAEL+DSEKTEK FSAFAHFEERCKEFDRARVIYKYALDQMPREQVPELYRDFIGFEKRHGSV+GIEEVI+NNRRLQYEERASASPLDYDNWFDYLRLEES GD+DRTREVYERAIANVPPV +KR+WRRYIYLWINYALFEELQAE ACLDVVPHKSFTFAK+WL+LAKFEVRHK+L AARKVLGQAIGMCPKE+LFKGYVQLERDLGEIDRCRK+Y + + +FPSDCG WAQFAALEGSV ET+RSR+VFELAIRQPVLDMPETLWK RLL+RTQH KV +
Sbjct: 163 ERWMEWEPEDNAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRALAELSDSEKTEKLFSAFAHFEERCKEFDRARVIYKYALDQMPREQVPELYRDFIGFEKRHGSVQGIEEVIMNNRRLQYEERASASPLDYDNWFDYLRLEESTGDLDRTREVYERAIANVPPVLEKRFWRRYIYLWINYALFEELQAEDAQRTREVYRACLDVVPHKSFTFAKIWLMLAKFEVRHKDLQAARKVLGQAIGMCPKEKLFKGYVQLERDLGEIDRCRKVYSKCLEAFPSDCGVWAQFAALEGSVGETERSRAVFELAIRQPVLDMPETLWKXXXXXXXXXXXXXXXXXXXXRLLERTQHVKVWI 542
BLAST of mRNA_H-paniculata_contig5092.12380.1 vs. uniprot
Match: A0A7S0RPR7_9CHLO (Hypothetical protein n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0RPR7_9CHLO) HSP 1 Score: 420 bits (1080), Expect = 9.420e-140 Identity = 240/389 (61.70%), Postives = 293/389 (75.32%), Query Frame = 1
Query: 7 LGNPAKARAIFERWMEWEPEDNAWGAYVKFEMRQEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERALAELADSEKTEKFFSAFAHFEERCKEFDRARVIYKYALDQMPREQVPELYRDFIGFEKRHGSVEGIEEVIINNRRLQYEERASASPLDYDNWFDYLRLEESAGDVDRTREVYERAIANVPPVADKRYWRRYIYLWINYALFEELQAEXXXXXXXXXXACLDVVPHKSFTFAKVWLLLAKFEVRHKNLDAARKVLGQAIGMCPKERLFKGYVQLERDLGEIDRCRKIYRQAIYSFPSDCGAWAQFAALEGSVEETDRSRSVFELAIRQPVLDMPETLWKAYIDFEAENGETDNARQLFERLLDRTQHYKV 1173
+GN A ARA+FERWM+WEP+ N W AYV+ E+R ++ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ERA+ EL + +TE+ F FA FEE KE +RAR I+KYALD +P+ Q ELYR F+ FEK+HG EGIE+VI++ RR QYEE +PL YD+WFDY RLEE+ GD D+ REVYERAIAN+PP +KRYW+RYIYLWINYALFEEL+AE CL +PHK F+F+KVWL+ A+FE+R K L +ARK+LG AIG PK ++FK Y+ +E LG +DRCR +Y + + ++C AW QFA LE SV E DR+R +FELAI QPVLDMPE LWKAYIDFE GE + RQL+ERLL+RT+H KV
Sbjct: 1 MGNVAGARAVFERWMQWEPDHNGWKAYVRMELRYDEVERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRCYERAVEELGEDGQTEELFIKFAEFEEHSKETERARTIFKYALDHIPKSQATELYRRFVTFEKQHGDREGIEDVIVSKRRFQYEEEVKRNPLSYDSWFDYARLEETHGDHDKVREVYERAIANMPPATEKRYWQRYIYLWINYALFEELEAEDPARTREVYRECLKQIPHKQFSFSKVWLMAAQFEIRQKQLTSARKILGLAIGTAPKNKIFKTYINIELQLGNVDRCRTLYEKYLEWNAANCQAWVQFAELEQSVAEEDRARGIFELAIAQPVLDMPEVLWKAYIDFEISCGERERTRQLYERLLERTRHVKV 389
BLAST of mRNA_H-paniculata_contig5092.12380.1 vs. uniprot
Match: H3CZE3_TETNG (Crooked neck pre-mRNA splicing factor 1 n=1 Tax=Tetraodon nigroviridis TaxID=99883 RepID=H3CZE3_TETNG) HSP 1 Score: 406 bits (1043), Expect = 3.060e-132 Identity = 222/394 (56.35%), Postives = 282/394 (71.57%), Query Frame = 1
Query: 1 EMLGNPAKARAIFERWMEWEPEDNAWGAYVKFEMRQEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERALAELADSEKTEK-FFSAFAHFEERCKEFDRARVIYKYALDQMPREQVPELYRDFIGFEKRHGSVEGIEEVIINNRRLQYEERASASPLDYDNWFDYLRLEESAGDVDRTREVYERAIANVPPVADKRYWRRYIYLWINYALFEELQAEXXXXXXXXXXACLDVVPHKSFTFAKVWLLLAKFEVRHKNLDAARKVLGQAIGMCPKERLFKGYVQLERDLGEIDRCRKIYRQAIYSFPSDCGAWAQFAALEGSVEETDRSRSVFELAIRQPVLDMPETLWKAYIDFEAENGETDNARQLFERLLDRTQHYKVGV 1179
EMLGNPA R +FERWMEWEPE+ AW +Y+ FE+R ++ XXXXXXXXXXXXXXXXXXXXXXXX E + E+ F AFA FEE KEF+RARVIYKY+LD++P+++ +L++ + FEK+ G GIE+VI++ RR QYEE A+P +YD WFDYLRL E+ DVD R+VYERAIAN+PP+ +KR+WRRYIYLWINYAL+EEL+ + ACLD++PHK FTFAK+WLL A+FE+R KNL AARK +G AIG CPK +L KGY++LE L E DRCRK+Y + + P +C W +FA LE + +T+R+R++FELAI QP LDMPE LWK+YIDFE E E +N R L++RLL RTQH KV +
Sbjct: 160 EMLGNPAGCRQVFERWMEWEPEEQAWHSYINFELRYKEVDKARSIYERYILLVHPXXXXXXXXXXXXXXXXXXXXXXXXXXXAVEFFGEDHIEENLFVAFAKFEEAQKEFERARVIYKYSLDRIPKQEAQQLFKHYTMFEKKFGDRRGIEDVIVSKRRFQYEEEVKANPHNYDAWFDYLRLVENDADVDTVRDVYERAIANIPPIQEKRHWRRYIYLWINYALYEELEVKDPERTRQVYQACLDLIPHKKFTFAKMWLLYAQFEIRQKNLQAARKTMGTAIGKCPKNKLLKGYIELELQLREFDRCRKLYEKYLEFSPENCTTWIKFAELETILGDTERARAIFELAIGQPRLDMPEVLWKSYIDFEIEQEEYENTRSLYKRLLQRTQHVKVWI 553
BLAST of mRNA_H-paniculata_contig5092.12380.1 vs. uniprot
Match: A0A4Z2BQ93_9TELE (Uncharacterized protein n=2 Tax=Takifugu TaxID=31032 RepID=A0A4Z2BQ93_9TELE) HSP 1 Score: 407 bits (1045), Expect = 4.820e-132 Identity = 198/393 (50.38%), Postives = 259/393 (65.90%), Query Frame = 1
Query: 1 EMLGNPAKARAIFERWMEWEPEDNAWGAYVKFEMRQEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERALAELADSEKTEKFFSAFAHFEERCKEFDRARVIYKYALDQMPREQVPELYRDFIGFEKRHGSVEGIEEVIINNRRLQYEERASASPLDYDNWFDYLRLEESAGDVDRTREVYERAIANVPPVADKRYWRRYIYLWINYALFEELQAEXXXXXXXXXXACLDVVPHKSFTFAKVWLLLAKFEVRHKNLDAARKVLGQAIGMCPKERLFKGYVQLERDLGEIDRCRKIYRQAIYSFPSDCGAWAQFAALEGSVEETDRSRSVFELAIRQPVLDMPETLWKAYIDFEAENGETDNARQLFERLLDRTQHYKVGV 1179
EMLGNPA R +FERWMEWEPE+ AW +Y+ FE+R ++ ERA+ + E F AFA FEE KEF+RARVIYKY+LD++P+++ EL++ + FEK+ G GIE+VI++ RR QYEE A+P +YD WFDYLRL E+ D D R+VYERAIAN+PP+ +KR+WRRYIYLWINYAL+EEL+ + ACLD++PHK FTFAK+WLL A+FE+R K+L AARK +G AIG CPK +L KGY++LE L E DRCRK+Y + + P +C W +FA LE + +++R+R++FELAI QP LDMPE LWK+YIDFE E E +N R L++RLL RTQH KV +
Sbjct: 187 EMLGNPAGCRQVFERWMEWEPEEQAWHSYINFELRYKEVDKARTIYERYILLLTMLIPEEYARFEERHGYIAHSRKVY-ERAVEFFGEDHIEENLFVAFAKFEETQKEFERARVIYKYSLDRIPKQEAQELFKHYTMFEKKFGDRRGIEDVIVSKRRFQYEEEVKANPHNYDAWFDYLRLVENDADPDTVRDVYERAIANIPPIQEKRHWRRYIYLWINYALYEELEVKDPERTRQVYQACLDLIPHKKFTFAKIWLLYAQFEIRQKSLQAARKTMGMAIGKCPKNKLLKGYIELELQLREFDRCRKLYEKYLEFSPENCTTWIKFAELETILGDSERARAIFELAIGQPRLDMPEVLWKSYIDFEIEQEEYENTRNLYKRLLQRTQHVKVWI 578
BLAST of mRNA_H-paniculata_contig5092.12380.1 vs. uniprot
Match: A0A8C0YJZ9_CYPCA (Crooked neck pre-mRNA splicing factor 1 n=2 Tax=Cyprinus carpio TaxID=7962 RepID=A0A8C0YJZ9_CYPCA) HSP 1 Score: 400 bits (1029), Expect = 8.370e-131 Identity = 198/392 (50.51%), Postives = 255/392 (65.05%), Query Frame = 1
Query: 10 GNPAKARAIFERWMEWEPEDNAWGAYVKFEMRQEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--ERALAELADSEKTEKFFSAFAHFEERCKEFDRARVIYKYALDQMPREQVPELYRDFIGFEKRHGSVEGIEEVIINNRRLQYEERASASPLDYDNWFDYLRLEESAGDVDRTREVYERAIANVPPVADKRYWRRYIYLWINYALFEELQAEXXXXXXXXXXACLDVVPHKSFTFAKVWLLLAKFEVRHKNLDAARKVLGQAIGMCPKERLFKGYVQLERDLGEIDRCRKIYRQAIYSFPSDCGAWAQFAALEGSVEETDRSRSVFELAIRQPVLDMPETLWKAYIDFEAENGETDNARQLFERLLDRTQHYKVGV 1179
GN A R +FERWMEWEPE+ AW +Y+ FE+R ++ ERA+ + +E + AFA FEE+ KEF+R RVIYKYALD++P++Q EL++++ FEKR G GIE+VI++ RR QYEE A+P +YD WFDYLRL ES D D REVYERAIAN PP+ +KR+WRRYIYLWINYAL+EEL+ + ACL+++PHK FTFAK+WLL +FE+R KNL AR+ LG AIG CPK +LFKGY++LE L E DRCRK+Y + + P +C W +FA LE + +T+R+R++FELAI QP LDMPE LWK+YIDFE E E DN R L++RLL RTQH KV +
Sbjct: 137 GNIAGCRQVFERWMEWEPEEQAWHSYINFELRYKEVDKSRIILNGKALVMVHPEVKNWIKYAHFEEKHGYIALARKVFERAVEFFGEEHISESLYVAFARFEEKQKEFERVRVIYKYALDRIPKQQAQELFKNYTVFEKRFGDRRGIEDVIVSKRRFQYEEEVKANPHNYDAWFDYLRLVESDTDADTVREVYERAIANTPPIQEKRHWRRYIYLWINYALYEELEVKDPERTRQVYQACLELIPHKKFTFAKIWLLYGQFEIRQKNLQNARRGLGTAIGKCPKNKLFKGYIELELQLREFDRCRKLYEKYLEFSPENCTTWIKFAELETILGDTERARAIFELAIGQPRLDMPEVLWKSYIDFEIEQEEYDNTRGLYKRLLQRTQHVKVWI 528
BLAST of mRNA_H-paniculata_contig5092.12380.1 vs. uniprot
Match: A0A8C5FH56_GADMO (Crooked neck pre-mRNA splicing factor 1 n=3 Tax=Gadus morhua TaxID=8049 RepID=A0A8C5FH56_GADMO) HSP 1 Score: 402 bits (1032), Expect = 2.320e-130 Identity = 197/393 (50.13%), Postives = 257/393 (65.39%), Query Frame = 1
Query: 1 EMLGNPAKARAIFERWMEWEPEDNAWGAYVKFEMRQEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERALAELADSEKTEKFFSAFAHFEERCKEFDRARVIYKYALDQMPREQVPELYRDFIGFEKRHGSVEGIEEVIINNRRLQYEERASASPLDYDNWFDYLRLEESAGDVDRTREVYERAIANVPPVADKRYWRRYIYLWINYALFEELQAEXXXXXXXXXXACLDVVPHKSFTFAKVWLLLAKFEVRHKNLDAARKVLGQAIGMCPKERLFKGYVQLERDLGEIDRCRKIYRQAIYSFPSDCGAWAQFAALEGSVEETDRSRSVFELAIRQPVLDMPETLWKAYIDFEAENGETDNARQLFERLLDRTQHYKVGV 1179
EMLGN A R +FERW EWEPE+ AW +Y+ FE+R ++ ERA+ + E+ F AFA FEE KE +R RVIYKYAL+++P+ Q EL++++ FEK+ G GIE+VI+N RR QYEE A+P +YD WFDYLRL ES + D R+VYERAIAN+PP+ +KR+WRRYIYLWINYAL+EEL+ + ACLD++PHK FTFAK+WLL ++FE+R KNL AAR+ LG AIG CPK +LFKGY++LE L E DRCRK+Y++ + P +C W +FA LE + + +R+R++FELAI QP LDMPE LWK+YIDFE E E D+ R L++RLL RTQH KV +
Sbjct: 158 EMLGNVAGCRQVFERWTEWEPEEQAWHSYINFELRYKEVDKARSIYERYILHNWIKYARFEDKHGYIAHGRRVF-----ERAVEFFGEEHVDERLFVAFARFEEMQKEMERVRVIYKYALERIPKTQAQELFKNYTMFEKKFGDRRGIEDVIVNKRRFQYEEEVKANPHNYDAWFDYLRLVESDAEADAVRDVYERAIANMPPIQEKRHWRRYIYLWINYALYEELEVKDPERTRQVYQACLDLIPHKKFTFAKMWLLYSQFEIRQKNLPAARRGLGSAIGKCPKNKLFKGYIELELQLREFDRCRKLYQKYLEFSPENCSTWIKFAELETILGDVERARAIFELAIGQPRLDMPEVLWKSYIDFEIEQEEFDHTRDLYQRLLQRTQHVKVWI 545
BLAST of mRNA_H-paniculata_contig5092.12380.1 vs. uniprot
Match: A0A672NZU2_SINGR (Crooked neck-like protein 1 n=34 Tax=Cyprininae TaxID=2743694 RepID=A0A672NZU2_SINGR) HSP 1 Score: 401 bits (1031), Expect = 4.320e-130 Identity = 199/390 (51.03%), Postives = 255/390 (65.38%), Query Frame = 1
Query: 10 GNPAKARAIFERWMEWEPEDNAWGAYVKFEMRQEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERALAELADSEKTEKFFSAFAHFEERCKEFDRARVIYKYALDQMPREQVPELYRDFIGFEKRHGSVEGIEEVIINNRRLQYEERASASPLDYDNWFDYLRLEESAGDVDRTREVYERAIANVPPVADKRYWRRYIYLWINYALFEELQAEXXXXXXXXXXACLDVVPHKSFTFAKVWLLLAKFEVRHKNLDAARKVLGQAIGMCPKERLFKGYVQLERDLGEIDRCRKIYRQAIYSFPSDCGAWAQFAALEGSVEETDRSRSVFELAIRQPVLDMPETLWKAYIDFEAENGETDNARQLFERLLDRTQHYKVGV 1179
GN A R +FERWMEWEPE+ AW +Y+ FE+R ++ ERA+ + +E AFA FEE+ KEF+R RVIYKYALD++P++Q EL++++ FEKR G GIE+VI++ RR QYEE ASP +YD WFDYLRL ES D D REVYERAIAN+PP+ +KR+WRRYIYLWI+YAL+EEL+ + ACL+++PHK FTFAK+WLL +FE+R KNL AR+ LG AIG CPK +LFKGY++LE L E DRCRK+Y + + P +C W +FA LE + +TDR+R++FELAI QP LDMPE LWK+YIDFE E E DN R L++RLL RTQH KV +
Sbjct: 162 GNIAGCRQVFERWMEWEPEEQAWHSYINFELRYKEVDKSRTLVMVHPEVKNWIKYAHFEEKHGYIARARKVF----ERAVEFFGEEYISENLSVAFARFEEKQKEFERVRVIYKYALDRIPKQQAQELFKNYTVFEKRFGDRRGIEDVIVSKRRFQYEEEVKASPHNYDAWFDYLRLVESDTDADTVREVYERAIANIPPIQEKRHWRRYIYLWIDYALYEELEVKDPERTRQVYQACLELIPHKKFTFAKIWLLYGQFEIRQKNLQNARRGLGTAIGKCPKNKLFKGYIELELQLREFDRCRKLYEKYLEFSPENCTTWIKFAELEAILGDTDRARAIFELAIGQPRLDMPEVLWKSYIDFEIEQEEYDNTRGLYKRLLQRTQHVKVWI 547
BLAST of mRNA_H-paniculata_contig5092.12380.1 vs. uniprot
Match: A0A672NTF8_SINGR (Crooked neck-like protein 1 n=6 Tax=Cyprininae TaxID=2743694 RepID=A0A672NTF8_SINGR) HSP 1 Score: 400 bits (1029), Expect = 4.930e-130 Identity = 199/392 (50.77%), Postives = 255/392 (65.05%), Query Frame = 1
Query: 10 GNPAKARAIFERWMEWEPEDNAWGAYVKFEMRQEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--ERALAELADSEKTEKFFSAFAHFEERCKEFDRARVIYKYALDQMPREQVPELYRDFIGFEKRHGSVEGIEEVIINNRRLQYEERASASPLDYDNWFDYLRLEESAGDVDRTREVYERAIANVPPVADKRYWRRYIYLWINYALFEELQAEXXXXXXXXXXACLDVVPHKSFTFAKVWLLLAKFEVRHKNLDAARKVLGQAIGMCPKERLFKGYVQLERDLGEIDRCRKIYRQAIYSFPSDCGAWAQFAALEGSVEETDRSRSVFELAIRQPVLDMPETLWKAYIDFEAENGETDNARQLFERLLDRTQHYKVGV 1179
GN A R +FERWMEWEPE+ AW +Y+ FE+R ++ ERA+ + +E AFA FEE+ KEF+R RVIYKYALD++P++Q EL++++ FEKR G GIE+VI++ RR QYEE ASP +YD WFDYLRL ES D D REVYERAIAN+PP+ +KR+WRRYIYLWI+YAL+EEL+ + ACL+++PHK FTFAK+WLL +FE+R KNL AR+ LG AIG CPK +LFKGY++LE L E DRCRK+Y + + P +C W +FA LE + +TDR+R++FELAI QP LDMPE LWK+YIDFE E E DN R L++RLL RTQH KV +
Sbjct: 162 GNIAGCRQVFERWMEWEPEEQAWHSYINFELRYKEVDKSRIILNGKALVMVHPEVKNWIKYAHFEEKHGYIARARKVFERAVEFFGEEYISENLSVAFARFEEKQKEFERVRVIYKYALDRIPKQQAQELFKNYTVFEKRFGDRRGIEDVIVSKRRFQYEEEVKASPHNYDAWFDYLRLVESDTDADTVREVYERAIANIPPIQEKRHWRRYIYLWIDYALYEELEVKDPERTRQVYQACLELIPHKKFTFAKIWLLYGQFEIRQKNLQNARRGLGTAIGKCPKNKLFKGYIELELQLREFDRCRKLYEKYLEFSPENCTTWIKFAELEAILGDTDRARAIFELAIGQPRLDMPEVLWKSYIDFEIEQEEYDNTRGLYKRLLQRTQHVKVWI 553
BLAST of mRNA_H-paniculata_contig5092.12380.1 vs. uniprot
Match: A0A672NTP1_SINGR (Crooked neck-like protein 1 n=7 Tax=Otophysi TaxID=186626 RepID=A0A672NTP1_SINGR) HSP 1 Score: 401 bits (1031), Expect = 1.030e-129 Identity = 199/390 (51.03%), Postives = 255/390 (65.38%), Query Frame = 1
Query: 10 GNPAKARAIFERWMEWEPEDNAWGAYVKFEMRQEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERALAELADSEKTEKFFSAFAHFEERCKEFDRARVIYKYALDQMPREQVPELYRDFIGFEKRHGSVEGIEEVIINNRRLQYEERASASPLDYDNWFDYLRLEESAGDVDRTREVYERAIANVPPVADKRYWRRYIYLWINYALFEELQAEXXXXXXXXXXACLDVVPHKSFTFAKVWLLLAKFEVRHKNLDAARKVLGQAIGMCPKERLFKGYVQLERDLGEIDRCRKIYRQAIYSFPSDCGAWAQFAALEGSVEETDRSRSVFELAIRQPVLDMPETLWKAYIDFEAENGETDNARQLFERLLDRTQHYKVGV 1179
GN A R +FERWMEWEPE+ AW +Y+ FE+R ++ ERA+ + +E AFA FEE+ KEF+R RVIYKYALD++P++Q EL++++ FEKR G GIE+VI++ RR QYEE ASP +YD WFDYLRL ES D D REVYERAIAN+PP+ +KR+WRRYIYLWI+YAL+EEL+ + ACL+++PHK FTFAK+WLL +FE+R KNL AR+ LG AIG CPK +LFKGY++LE L E DRCRK+Y + + P +C W +FA LE + +TDR+R++FELAI QP LDMPE LWK+YIDFE E E DN R L++RLL RTQH KV +
Sbjct: 162 GNIAGCRQVFERWMEWEPEEQAWHSYINFELRYKEVDKSRTLVMVHPEVKNWIKYAHFEEKHGYIARARKVF----ERAVEFFGEEYISENLSVAFARFEEKQKEFERVRVIYKYALDRIPKQQAQELFKNYTVFEKRFGDRRGIEDVIVSKRRFQYEEEVKASPHNYDAWFDYLRLVESDTDADTVREVYERAIANIPPIQEKRHWRRYIYLWIDYALYEELEVKDPERTRQVYQACLELIPHKKFTFAKIWLLYGQFEIRQKNLQNARRGLGTAIGKCPKNKLFKGYIELELQLREFDRCRKLYEKYLEFSPENCTTWIKFAELEAILGDTDRARAIFELAIGQPRLDMPEVLWKSYIDFEIEQEEYDNTRGLYKRLLQRTQHVKVWI 547
BLAST of mRNA_H-paniculata_contig5092.12380.1 vs. uniprot
Match: A0A8D3D5A8_SCOMX (Crooked neck pre-mRNA splicing factor 1 n=3 Tax=Scophthalmus maximus TaxID=52904 RepID=A0A8D3D5A8_SCOMX) HSP 1 Score: 401 bits (1030), Expect = 2.120e-129 Identity = 202/404 (50.00%), Postives = 257/404 (63.61%), Query Frame = 1
Query: 1 EMLGNPAKARAIFERWMEWEPEDNAWGAYVKFEMRQEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERALAELADSEKTEKFFSAFAHFEERCKEFDRARVIYKYALDQMPREQVPELYRDFIGFEKRHGSVEGIEEVIINNRRLQYEERASASPLDYDNWFDYLRLEESAGDVDRTREVYERAIANVPPVADKRYWRRYIYLWINYALFEELQAEXXXXXXXXXXACLDVVPHKSFTFAKVWLLLAKFEVRHKNLDAARKVLGQAIGMCPKERLFKGYVQLERDLGEIDRCRKIYRQAIYSFPSDCGAWAQFAALEGSVEETDRSRSVFELAIRQPVLDMPETLWKAYIDFEAENGETDNARQLFERLLDRTQHYKVGVRCRCPFHLSSD 1212
EMLGN A R FERWMEWEPE+ AW +Y+ FE+R ++ ERA+ + E F AFA FEE KE +R RVIYKYALD++P++Q EL++++ FEK+ G GIE+VI++ RR QYEE A+P +YD WFDYLRL ES D D REVYERAIAN+PP+ +KR+WRRYIYLWINYAL+EEL+ + ACLD++PHK FTFAK+WLL A+FE+R KNL ARKV+G AIG CPK +L KGY++LE L E DRCRK+Y + + P +C W +F+ LE + + +R+R +FELAI QP LDMPE LWK+YIDFE E + N R L++RLL RTQH KV + F LS D
Sbjct: 154 EMLGNVAGCRQAFERWMEWEPEEQAWHSYINFELRYKEVDKARTIYERYILLWNWIKYARFEEKHGYIAHSRKVF----ERAVEFFGEEYVNENLFVAFARFEEAQKEMERVRVIYKYALDRIPKQQAQELFKNYTMFEKKFGDRRGIEDVIVSKRRFQYEEEVKANPHNYDAWFDYLRLVESDADPDTVREVYERAIANIPPIQEKRHWRRYIYLWINYALYEELEVKDPETTRQVYQACLDLMPHKKFTFAKIWLLYAQFEIRQKNLQGARKVMGTAIGKCPKNKLLKGYIELELQLREFDRCRKLYEKYLEFSPENCTTWIKFSELETILGDVERARGIFELAIGQPRLDMPEVLWKSYIDFEIEQEDFGNTRNLYKRLLQRTQHVKVWISY-AKFELSID 552 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5092.12380.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig5092.12380.1 >prot_H-paniculata_contig5092.12380.1 ID=prot_H-paniculata_contig5092.12380.1|Name=mRNA_H-paniculata_contig5092.12380.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=450bp MLGNPAKARAIFERWMEWEPEDNAWGAYVKFEMRQEQPANARNVFRRYVDback to top mRNA from alignment at H-paniculata_contig5092:939..14458+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig5092.12380.1 ID=mRNA_H-paniculata_contig5092.12380.1|Name=mRNA_H-paniculata_contig5092.12380.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=13520bp|location=Sequence derived from alignment at H-paniculata_contig5092:939..14458+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig5092:939..14458+ >mRNA_H-paniculata_contig5092.12380.1 ID=mRNA_H-paniculata_contig5092.12380.1|Name=mRNA_H-paniculata_contig5092.12380.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2700bp|location=Sequence derived from alignment at H-paniculata_contig5092:939..14458+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |