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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog description | expressed unknown protein |
| Ec32 ortholog | Ec-08_001410.1 |
| Exons | 3 |
| Model size | 2994 |
| Cds size | 897 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig509.12374.1 >prot_H-paniculata_contig509.12374.1 ID=prot_H-paniculata_contig509.12374.1|Name=mRNA_H-paniculata_contig509.12374.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=299bp
MKFRKRHQQSTYDFPGVTVSTPLVVHIFCLYKSGMDRGSPSGEGIGAALA
DGWQALVQWSRSTSNDPFNACWNDGLANCAGDGDYSPPPTRSRSKRDKAR
RQRDEDDVTWVAYTWLNTPARRHQLGERANKPPPRLYTPPSTRHSAKMRN
NFSNSSLTPPVTPPHNTGEDPFSTALSLSLSEDGNSGRWTTTPTATARNP
CPRPHPPLEWTATTTPPSFNCLDQKHKQEPAGAGTKGPVTHRVARAWIWM
VDSVVAERWNEVLVEIRAPRAEQARGGDGGGGGDGNYGRRGTGLKKER* back to topmRNA from alignment at H-paniculata_contig509:4946..11586- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig509.12374.1 ID=mRNA_H-paniculata_contig509.12374.1|Name=mRNA_H-paniculata_contig509.12374.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=6641bp|location=Sequence derived from alignment at H-paniculata_contig509:4946..11586- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GTCTCTTGGACGGCACTGTTGGACATGAAATTTAGGAAGAGGCATCAACA
GAGCACATACGACTTTCCGGGCGTTACAGTCAGTACTCCTCTCGTTGTGC
ATATATTTTGTCTCTACAAGAGCGGCATGGACCGTGGTAGTCCGTCAGGG
GAAGGGATCGGCGCTGCCCTGGCGGACGGATGGCAAGCCCTTGTTCAATG
GTAAATAATTTGTTCATGCAGCCTTTGAGGGGCGTGTATCAAAACCTTAA
AAAGCACCATGGGGTATGGAGTCTTTTCGTCGAAGTCTCCCCATCGTCTT
TACAGCGAGTGACGTGCGCATCATGACTTCCGAGGGTTTGAGTCCCCTTC
CCGCGCATTGCCTGTATCAGTAGAGACAAGAATTTTGGTGATAATTATAG
CTTGTGGTGACAGTACTGACTCCCGCCGGCCGCACCCTCCCCGGTACGAC
AGGTCAAGGTCAACCTCCAATGACCCGTTCAACGCATGCTGGAACGATGG
GCTTGCAAACTGTGCTGGAGACGGAGACTATTCGCCCCCGCCAACAAGAT
CTAGGAGTAAACGTGATAAGGCGAGGCGCCAGCGTGATGAGGACGATGTC
ACGTGGGTAGCATACACGTGGCTCAACACTCCCGCGAGAAGGCATCAGCT
AGGGGAGCGAGCGGTGAGATGATTCGCCCCTCCACATGAAGAATGTTGAT
GTGCCGCATATTTTCTCTTGACATCTTTAGGGACTGTAAGAGTGTTCCTG
TGGTTGCTATGTATGTATGAATGTAGGGGCTCCTTTTTGCAGTCGCTATA
TAACGTGGTGTGACTGTACTGTTTGTGATGCACTACCGCATGCCAACGAT
AATCAGGAATTATTCAACGAGACCAGCCCTGGTTTTTGCATTACTATGTC
GACGGCGTTCTCCTCCCGTTGCGTGTCGCTTCTGACGATTTATCCGCCGT
GCAGCCGTTTAAGGAACATTGCCGGCTGTAGGGTCACGGACTTTCGTGAA
GCGCGAGACACAACGTCGTGTGAAGATACGTAACTTGAAACCTGGCTCTT
GCCTCTCTTCAAAACATCAGTGACTGTTCAAATTCCGGAAAAAGACGAAC
ACTGAACTCTGCTCCTCTGTGTGCTCCTCATGTTCGGGATGGTGGACCAC
CTCGATGTTACTGCGCTGTCTGTATCATATAGAAATAGAACACGACAGTC
TCAGTGGTGCTCAGTAGATGGATGATACTTTGACCGTGGCGGAATTAGTC
GTTCTCCTTGCAGTTAGTTCCTCCATTTTATGGCTCACTTGAATTTTGAT
AAAGCCCGGGCCAACCCAAGGTGAAATATCATGTGTCGTTTTTTACAGCA
CTGACTGTAGTACAGCCATGGCGACGCCCATGCAATTCGTATTTCGTCGC
TGTACATGCCCTTTTCGAAAACCATGACCCAAGTGCAACGCTAGCTGCGC
TCCAGGCTACGCGCACATCTAAATATCGATCCAAGTTCCCCGAAACCAAA
TATATAAGTATTTCAATACTACACTTCGGTGACATTTTTTACCCTTCATT
CGATATACAGTATAGTAGACGTGTTTGACCCATGTTACTTGTTTAGGTTT
CAGAGCGGTTTCACAGCAAGAATATGTAAAATACGTCAAGACTCCCTGTT
GATGAGAAATGTCTGAAATGCCAGTGTAAGAAATAAGAGTTGCGTCGCCG
ACGACCCTGAAAAACATCCCCACAGTACTATATAGAATAAGTATGACGAG
TAGCGAATTTATCTTATGTACCGCCAAACACGCCTCGACTGAGGAAGGTG
CAAATTATGGTTTCAAGCGTTGTACGCGCCATGTGATCGGTTTCAACATA
TTATCTAGGTGGCAGTTACAAGCACTGCAATATTTCAAAAGTACTTTGGA
ACTCAATTAGTACGCGGTGGATATTCGGAACAGTTCCTCTCTCGAAGGTG
ATTTTTGAAGCAATGTGCAGCGAGGACAAACAGCTCTTCTCTTCTGTTTC
TCAATTTCCTACGCCTGTTTATGTGTTGCCCTGACTGAGGCCTTGTCTTG
ACCGCTGAAAAACAAAGTGGGCAGATTAAACAACTTGACTCAACTTGCTC
ACATTTCATGATTGAATCCTGTCCACTCAACAAAATGAGGGAAGAAAAGC
AAGCGAGAACGACCACGTCCCCAAAATACTGTATGCGCGATGCCCTCTAT
GTAACCTTGCCAACTATTTACGCTTGAGAATGCGTTTCTAGCAGCGCGAA
TTTATTCTTTTATGTAGTCCGTAAATTGATAGATCCATCAATATTTTTGC
GGAAGAAAGCGTGAGTAACGATGGTTGCCGCCCGTATTGCGCCAATTAAC
AGCGTGTAATTAGTCCTCCCTCGAAAAATATGTTTCTCATTTTCTGGTAG
GGGGGTTAGGTTGTCCTTTAGCGAGGTCAGAAAAATCGAAATTGAAATTA
AGAAATTTCTCACTCTCTGTGATTGGTCTGTGCTTCATCGATAATCTTCC
TCTAAGAGGCACTAACAGGCTCAGACCAATCTCAGAGGCTGAAGAAAGTT
CTCATTTTTCAATTTCGATTTTGTTTTAGCATAAATAATACACGGTCTTA
GGTCGTATTAAGTCGTGTCTTGTCGAGAGGCGACTTTTGCTTTTGGAGAA
AACGACTTTATTTTCTCGACCAGTGATTGGTTGGGAAGTTCTTGGACATT
TCGAAAGTCCACAAAAAATTCTTGGATATTTCCAATCTCACATCGGAGGG
AATCTCCAACATCGTTTTAGAAAAAGTGCTCGACAACTTCTGTAAAAGGA
GTCTATAGGGGAACATAATAGCGACCAAAAGGGGGGATGGTGGCATAGGG
TACTGCGCCCTGCTGTGTCCTGCTTCCGCATTTATTGAAGTACCACGGTG
GTACGCTGTGTTGCATACACAACAGCGTCCGAGGGCGAACCCGTGGAGGG
ACGCGGTGAGAACTGTGGGCAACCATGGTCAACGCCCGATGTAGTTGGCA
ACCAAGGACCAAAGGCGGTTACTACCCGTCGTGCAAATGGAAGCTTCACT
GCCCCCGCCTCAATAAGACGCATATCCGGCCTTAACTCTTGATTACCTGA
GCACCAAGCACTTGGTTTGGGTAGAGTCGGCTCAGAAATGAAGGAGAACG
AGTGCTGTGCGCGCGGCGGCAAATCAGACACGGACAAACAGGCAAAAATG
GTACTTTTTGTAAGTAACGAATGTCGACGCACACATTTGCTTTGGCCTGG
GTTAGATCAGACCGGTATTTCGACAACGTATGAAGAAACTGACAGCGAAC
AGATGTCGACGCTGAGTGCAGAAAGGGTATCAACATCCTTGACAGTATTC
ACGCACGTGAAGGGCAGACCACAGCAGCCGGAGCTCTGCGTGCTTGATGT
AGAGGCGGTACACGTGACAGACTGCAGTACACACATCCATTCCATCAAGT
CGTTGCAGCCAGCTAGACAACACAAACAGCATGATGTCGTAGAGTTGTGC
GTAGCGATGAAGTAAGCAGACAGTACTGCCTGCTGGACAGTTGGTGTACG
ATCGCATACAGTACCCTATTTGTGGCACACAATGAAGAGAGGGGGGAGCT
AGCGGGCACCAGCATATCCCGAGAGTTCTGTAGCGAGCGATAATCGCTGC
GTGTGTGGCATCGGAAGCAGAGAGTGGTTTCGGCGATGATCCGCAGCACA
CGTTGTGGCTCAGATTTCGCTGCCCCAAGTGGTATAGCGTACTCTGGTGT
CAGCCAAGTGATTCTCGTACCTGGTTCATCCGCCTAGCAGCCTGCATGTT
GAGATCACAGGTTGCCCTGTTGTTGTGACTTAGCTGCTCCTGTGAATCGG
TGAGCTTCGAGACATGTATATCTCAAAGGTTTCAATAGCTATCATATATC
AGTTCGTGGTAACGGTTACGTTCTCTCCTTGATACGCTTTTCTTCACTTC
AGCGTTCAGATTGGAATGCCGTCAAATTTATCCATCTTGAGTTAAACGTG
AAGACGAAAGTGTACTCACGCAGCCCTCGTCCGTTGCCTCCCCACCCCCT
TCCTGCAGAACAAGCCTCCTCCCCGGTTATACACGCCCCCGTCAACAAGA
CATTCTGCCAAAATGCGGAATAACTTCTCGAACTCAAGCCTGACACCTCC
GGTAACACCCCCTCACAACACTGGTGAGGACCCATTCTCCACGGCATTGA
GCTTGAGTTTGTCAGAGGATGGGAATTCCGGGCGGTGGACAACAACACCA
ACAGCGACAGCAAGGAACCCATGCCCGCGCCCGCACCCCCCACTGGAGTG
GACTGCCACTACTACCCCGCCGTCTTTCAACTGCCTCGATCAGAAACACA
AGCAGGAGCCGGCGGGGGCCGGAACAAAGGGTCCCGTGACCCACCGAGTT
GCACGAGCGTGGATCTGGATGGTCGACAGCGTTGTAGCGGAGAGGTGGAA
TGAGGTCTTGGTGGAGATTCGGGCACCTCGCGCGGAGCAGGCCCGTGGCG
GCGACGGCGGTGGTGGTGGTGATGGTAATTATGGTCGAAGGGGGACGGGG
TTGAAAAAGGAAAGGTAAAGCGGGACACGCAACAGGCGGAACGTGGTCGG
AAGGGAGGCGGCGCACACCCGTCTTTGCAACCTCAGTCGAGGTTCGCCGC
ATCACGTGGCGGTACCGGTGGAGAAGGAGGAAATTCAAGCTAGTTATTTT
CTTGCTATGCGCTGATGATGCAGGGAAGGGGGGAGGATTGAACGTGTGTT
TGTCAGGTGCTTTGCCACGCAGTTTGTGTTATCCCGAGAATATGGTGTAC
TGGTTGAGCGTGCTTCGAAGGAAGCGGTACGTGGTGTAAAGCGTAGGTCT
GAGGAGGTCGAATTTGTGATGACCGCTTTTTTGGAACAATTGATTTGCCC
GGGGTGAAGCGAATCTTGCTGCATGTACAGTAGATTTTTCTATCTTTATT
GGGCATCCAGTCAATTCACGCGGGTTAAGATATACCCACCTTTCAACTCT
ATCTATAGCTCTTACGGGCTGGCGGTTGGAGTCCTTGATTCTGTCCCTCA
TGTTTTTTCTGTGTGTGGGTGCCAATGTTTTGTAGGTAGTCCAAGTAATG
TCGAAGTTTGTCTGTTAATCGGTGATATGTCCATTAGTGTTTTAGGGTTG
GGGATGCATTTTTTCCGAAACCAATTCAAGCACACGTTATTTTCCACAGC
TGAAACAAATCGTGTAGTCTTTGTCAAAAGTGGGATATAGCAAGCGATCG
ATTTGCCACTAGTCGGTGTAGTGCTTTCTGCGGCGGAAAAATGATGTATA
TGTTGCAGCAGGACACAAGCAGCTTTGGCGGTGTGCTCCCGGTTTTGTGT
GGTGTGCACACATGCCAGTCAAGAAAATATGGTTCTCTTGAGTTTTATAT
CCCTTGTGGGTTTCGTGTCTTTTGTATTATAGGGTTACAGGTTTTTCCTT
TCAGTGCAGCAGAGGCCAAACGCTGACAGCGATGTGGATTTTGTCAAGAA
CAGCTTGTTGTTTTGCGCTATTCATGTATGTTGATTGTTGGCTAATGGCT
ATGTGACGAGCCTAACTCTAAACTCTGGCGGACTTTTACTTCGTGTGTGT
TTTTTGTTAGGTCAACATGTTTGAGGTCACATAATTTGGAGAGGCGACTG
TTTGATAATGGATGTAGATAGAGTTGGGCTGTCGAAACTTAGCAGATGCT
ACCTTACTGTCCGTCAGGGAGGGGTTGACGTTGAAGCCATGCTAATATCT
CTCGCTTTCTGCATGGCTTCGTTTTGTGTATTTTCTTGTCCCAAAACTGG
TCAGTGTTGTAGCACCTCTCGGCAGCTCGTCGGCCATGTACGTTGCATAT
ATGTATGTGGAGTCAAGTGTCAAATCTATATAAATCTGGCGTTAGCAATC
TATTCTGGCGTTGTTCCTTTTGCTGAGTATGTATTCTGCTGATTTAGCTC
AAGGCATTTTCGCTGCTCAGCCCATGGCCCTCCTTCTTTCTTGTCCCAGT
AAAATTCGCTCGCGACGATTGATGAGGTATTCGGAGCTGTGGGGAAGTAG
TGTGGGAGGTTTGGAGGTCCGGGGGATGTGGCACTGGCTAATAAAAGCTG
CTTGAGGCATCAAGTTAGCGTTTTGAGTTCGTGCAGCTTGTCTCCATGTT
TCGTTTCCCTTCACGTGCTTGCGTTCGTTCTGGGTGTAATAGGCGATACC
CGGGATTGGAGATCAACTTTCTTGTTGGGATTGAAGTTCGGTTGAATTCG
AATGGAACACTTCGAGAACGGTTCTAACGAAATAACGAGAAGCACTTTAC
GTGCGAATCGAGGTGTGAAATGGTTTTCAAATTATTCAATGTGCAAAGTG
AAAGGCAGTGAGATGGATGCGAACTCTCCCCGGAAAATGCCTCCACTAGC
ACCATTTTCGTAGTATTCCATTCAAACTTAACGAAACTTCAATCCCAACA
AGAAGGTTGTTCCTCAATCCCGAGTATCGCCTGTTGTGTATCTTCGTGCT
TCCCTGTGTGTTTTCAGCCCTGTTTATCTTGGGCACTCCATATCTGTATC
GGGCGGTTACATTCTCTGGTGATGTACGCCGGCAGCGGTTTTCAAAAATA
GGACTGGTTAAAAAAAATGCAAAACGATGCGTAGCGAGCTG back to topCoding sequence (CDS) from alignment at H-paniculata_contig509:4946..11586- >mRNA_H-paniculata_contig509.12374.1 ID=mRNA_H-paniculata_contig509.12374.1|Name=mRNA_H-paniculata_contig509.12374.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1794bp|location=Sequence derived from alignment at H-paniculata_contig509:4946..11586- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAAATTTAGGAAGAGGCATCAACAGAGCACATACGACTTTCCGGGCGT
TACAGTCAGTACTCCTCTCGTTGTGCATATATTTTGTCTCTACAAGAGCG
GCATGGACCGTGGTAGTCCGTCAGGGGAAGGGATCGGCGCTGCCCTGGCG
GACGGATGGCAAGCCCTTGTTCAATGATGAAATTTAGGAAGAGGCATCAA
CAGAGCACATACGACTTTCCGGGCGTTACAGTCAGTACTCCTCTCGTTGT
GCATATATTTTGTCTCTACAAGAGCGGCATGGACCGTGGTAGTCCGTCAG
GGGAAGGGATCGGCGCTGCCCTGGCGGACGGATGGCAAGCCCTTGTTCAA
TGGTCAAGGTCAACCTCCAATGACCCGTTCAACGCATGCTGGAACGATGG
GCTTGCAAACTGTGCTGGAGACGGAGACTATTCGCCCCCGCCAACAAGAT
CTAGGAGTAAACGTGATAAGGCGAGGCGCCAGCGTGATGAGGACGATGTC
ACGTGGGTAGCATACACGTGGCTCAACACTCCCGCGAGAAGGCATCAGCT
AGGGGAGCGAGCGGTCAAGGTCAACCTCCAATGACCCGTTCAACGCATGC
TGGAACGATGGGCTTGCAAACTGTGCTGGAGACGGAGACTATTCGCCCCC
GCCAACAAGATCTAGGAGTAAACGTGATAAGGCGAGGCGCCAGCGTGATG
AGGACGATGTCACGTGGGTAGCATACACGTGGCTCAACACTCCCGCGAGA
AGGCATCAGCTAGGGGAGCGAGCGAACAAGCCTCCTCCCCGGTTATACAC
GCCCCCGTCAACAAGACATTCTGCCAAAATGCGGAATAACTTCTCGAACT
CAAGCCTGACACCTCCGGTAACACCCCCTCACAACACTGGTGAGGACCCA
TTCTCCACGGCATTGAGCTTGAGTTTGTCAGAGGATGGGAATTCCGGGCG
GTGGACAACAACACCAACAGCGACAGCAAGGAACCCATGCCCGCGCCCGC
ACCCCCCACTGGAGTGGACTGCCACTACTACCCCGCCGTCTTTCAACTGC
CTCGATCAGAAACACAAGCAGGAGCCGGCGGGGGCCGGAACAAAGGGTCC
CGTGACCCACCGAGTTGCACGAGCGTGGATCTGGATGGTCGACAGCGTTG
TAGCGGAGAGGTGGAATGAGGTCTTGGTGGAGATTCGGGCACCTCGCGCG
GAGCAGGCCCGTGGCGGCGACGGCGGTGGTGGTGGTGATGGTAATTATGG
TCGAAGGGGGACGGGGTTGAAAAAGGAAAGGTAAAACAAGCCTCCTCCCC
GGTTATACACGCCCCCGTCAACAAGACATTCTGCCAAAATGCGGAATAAC
TTCTCGAACTCAAGCCTGACACCTCCGGTAACACCCCCTCACAACACTGG
TGAGGACCCATTCTCCACGGCATTGAGCTTGAGTTTGTCAGAGGATGGGA
ATTCCGGGCGGTGGACAACAACACCAACAGCGACAGCAAGGAACCCATGC
CCGCGCCCGCACCCCCCACTGGAGTGGACTGCCACTACTACCCCGCCGTC
TTTCAACTGCCTCGATCAGAAACACAAGCAGGAGCCGGCGGGGGCCGGAA
CAAAGGGTCCCGTGACCCACCGAGTTGCACGAGCGTGGATCTGGATGGTC
GACAGCGTTGTAGCGGAGAGGTGGAATGAGGTCTTGGTGGAGATTCGGGC
ACCTCGCGCGGAGCAGGCCCGTGGCGGCGACGGCGGTGGTGGTGGTGATG
GTAATTATGGTCGAAGGGGGACGGGGTTGAAAAAGGAAAGGTAA back to top
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