mRNA_H-paniculata_contig11940.1237.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_H-paniculata_contig11940.1237.1
Unique Name	mRNA_H-paniculata_contig11940.1237.1
Type	mRNA
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)

Homology

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BLAST of mRNA_H-paniculata_contig11940.1237.1 vs. uniprot
Match: A0A6H5JWN2_9PHAE (Methyltransf_25 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JWN2_9PHAE)

HSP 1 Score: 353 bits (906), Expect = 1.680e-107
Identity = 171/204 (83.82%), Postives = 189/204 (92.65%), Query Frame = 3

Query:  816 QVEKGGIIVDFGCGVGISTRLLADSMPHARRVIGIDLSPYMLAVGQHYNQEKKIGQRVSLIYGDVADTRLPDETASLVSSTYLLHEMPEEAVRDTLEEAYRLLKPGGSLAIMDMDPDAPSYRRLKSNPFLFSIVKATEPYLDQWFKNAPRIQHLLAETGFSVVRKAAVTGRHFLVVATKAGSIDLRPSDRARAAMDKHLNTWET 1427
            QVEKGG+IVDFGCGVG STRLLA+SMP ARRVIG+DLSPYM+AVG H+N+EKK G+RVSL+YGDVADTRLPD   SLVS TYLLHEMP+EAVRD L EAYRLLKPGGSLAIMDMDPDAP Y++L+SNPFLF+IV+ATEPYLDQWF  APRI HLLAETGFSVVRKAAVTGRHFLVVATKAGS+DLRPSDRAR AMD+HL+TW+T
Sbjct:  218 QVEKGGVIVDFGCGVGTSTRLLAESMPGARRVIGMDLSPYMIAVGNHHNREKKTGRRVSLVYGDVADTRLPDGGTSLVSCTYLLHEMPDEAVRDVLAEAYRLLKPGGSLAIMDMDPDAPGYKKLRSNPFLFAIVRATEPYLDQWFNLAPRIHHLLAETGFSVVRKAAVTGRHFLVVATKAGSLDLRPSDRAREAMDEHLSTWQT 421

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BLAST of mRNA_H-paniculata_contig11940.1237.1 vs. uniprot
Match: A0A6H5LIS9_9PHAE (Methyltransf_25 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LIS9_9PHAE)

HSP 1 Score: 207 bits (527), Expect = 5.530e-55
Identity = 105/201 (52.24%), Postives = 135/201 (67.16%), Query Frame = 3

Query:  819 VEKGGIIVDFGCGVGISTRLLADSMPHARRVIGIDLSPYMLAVGQHYNQE-KKIGQRVSLIYGDVADTRLPDETASLVSSTYLLHEMPEEAVRDTLEEAYRLLKPGGSLAIMDMDPDAPSYRRLKSNPFLFSIVKATEPYLDQWFKNAPRIQHLLAETGFSVVRKAAVTGRHFLVVATKAGSIDLRPSDRARAAMDKHLNT 1418
            VE GG++VD GCG G STR LA+  P A +V+G+DLSPYML  G+   QE +    RV L YGD A T L D +ASLVS + ++HE+  E  R  L EA+R+L+PGGS++IM+MDP AP Y +L++NP LFSI+++TEPYLD +F  A  I   L E GF+ VRK+ VTGRH  VV  K G+ DLR   + R   D HL T
Sbjct:  194 VEDGGLVVDLGCGSGTSTRYLAEQFPSAGKVVGVDLSPYMLLTGRFMQQEDENADPRVELEYGDAARTGLEDNSASLVSLSLVVHELSTEGRRSILAEAFRILRPGGSVSIMEMDPSAPGYIKLRNNPMLFSILRSTEPYLDVYFSEAGNIDAELQEAGFATVRKSGVTGRHMAVVGVKGGTFDLRADFKQREKDDTHLQT 394

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BLAST of mRNA_H-paniculata_contig11940.1237.1 vs. uniprot
Match: A0A7S3UW00_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UW00_HETAK)

HSP 1 Score: 194 bits (492), Expect = 8.740e-51
Identity = 97/196 (49.49%), Postives = 129/196 (65.82%), Query Frame = 3

Query:  813 LQVEKGGIIVDFGCGVGISTRLLADSMPHARRVIGIDLSPYMLAVGQHYNQ-----------EKKIGQRVSLIYGDVADTRLPDETASLVSSTYLLHEMPEEAVRDTLEEAYRLLKPGGSLAIMDMDPDAPSYRRLKSNPFLFSIVKATEPYLDQWFKNAPRIQHLLAETGFSVVRKAAVTGRHFLVVATKAGSID 1367
            + V  GG +VD GCG G S R LA+  P A  V+G+DLS  MLAVG+HY +           +     RV L Y D+A TRLPD  A LV+ + + HE+P+ AV D L EA RLL+PGG+LAIM+MDP+AP Y +L+ NPFL++++++TEPYL++WF  AP I+ L+ + GF VV K A TGRHF +VA   G  D
Sbjct:  167 VAVPPGGRVVDLGCGTGTSARKLAEWYPEAAEVVGVDLSAEMLAVGEHYLRGEAPEARQDRGDPTANARVRLEYADMAATRLPDACADLVTFSLVFHELPKSAVGDCLREARRLLRPGGALAIMEMDPEAPGYIKLRQNPFLYAVLRSTEPYLEEWFNLAPSIEELVMDAGFPVVTKTAATGRHFALVARAPGCAD 362

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BLAST of mRNA_H-paniculata_contig11940.1237.1 vs. uniprot
Match: A0A836CDV1_9STRA (S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDV1_9STRA)

HSP 1 Score: 193 bits (491), Expect = 4.360e-50
Identity = 99/191 (51.83%), Postives = 137/191 (71.73%), Query Frame = 3

Query:  819 VEKGGIIVDFGCGVGISTRLLADSMPHARRVIGIDLSPYMLAVGQHY--NQEKKIGQRVSLIYGDVADTRLPDETASLVSSTYLLHEMPEEAVRDTLEEAYRLLKPGGSLAIMDMDPDAPSYRRLKSNPFLFSIVKATEPYLDQWFKNAPRIQHLLAETGFSVVRKAAVTGRHFLVVATKAGSIDLRPSDR 1385
            V  G +++D GCG GIST  LA + PHA RV+G+DLSP+M+AVGQH    ++ ++  +V L YGD A+  LP E+A+LVS   +LHE+P+ A RD   +A R+LKPGG+L ++DMDP+ P  RR++SN   +SI+K+TEPYLDQ+F  AP ++  L E GF+VVR+AAV+ R   VVA KAG+ DLR + R
Sbjct:  224 VPAGALLLDLGCGTGISTVDLAAAYPHAARVVGVDLSPHMIAVGQHLLPARDARLQPQVELRYGDAAEPLLPAESAALVSIGLVLHELPDGARRDIFAQALRVLKPGGALCMLDMDPEGPDSRRVRSNVVAYSILKSTEPYLDQYFAAAPALRQELTECGFAVVREAAVSPRLKAVVAIKAGTTDLRTASR 414

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BLAST of mRNA_H-paniculata_contig11940.1237.1 vs. uniprot
Match: A0A836CP77_9STRA (S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CP77_9STRA)

HSP 1 Score: 190 bits (482), Expect = 5.320e-49
Identity = 99/187 (52.94%), Postives = 130/187 (69.52%), Query Frame = 3

Query:  819 VEKGGIIVDFGCGVGISTRLLADSMPHARRVIGIDLSPYMLAVGQHYNQE--KKIGQRVSLIYGDVADTRLPDETASLVSSTYLLHEMPEEAVRDTLEEAYRLLKPGGSLAIMDMDPDAPSYRRLKSNPFLFSIVKATEPYLDQWFKNAPRIQHLLAETGFSVVRKAAVTGRHFLVVATKAGSIDLR 1373
            V    ++VDFGCG GIST  LA   P A +VIGIDLSP+M++VG+   +E  K++   V  IYGD+A   LP  +A+ VS   +LHE+P +A R    EA R+LKPGG+L IM+MDPDAP   +L++N  LFSI+K+TEPYLDQ+F +A  +   L E GF VVR+AA TGRH  +VA KAG++DLR
Sbjct:  148 VPADSVVVDFGCGTGISTVDLAKQFPQASKVIGIDLSPHMISVGKFLLEERTKELKPAVEFIYGDIATQLLPANSAAFVSLNLVLHELPNDARRAIFAEALRILKPGGALGIMEMDPDAPGQVKLRANAVLFSIMKSTEPYLDQYFASAGNLAEELLEVGFPVVREAAATGRHKGMVAFKAGAVDLR 334

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BLAST of mRNA_H-paniculata_contig11940.1237.1 vs. uniprot
Match: A0A7S0SWC6_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SWC6_9STRA)

HSP 1 Score: 183 bits (464), Expect = 1.220e-47
Identity = 93/214 (43.46%), Postives = 128/214 (59.81%), Query Frame = 3

Query:  819 VEKGGIIVDFGCGVGISTRLLADSMPHARRVIGIDLSPYMLAVGQHYNQEKK------------IGQRVSLIYGDVADTRLPDETASLVSSTYLLHEMPEEAVRDTLEEAYRLLKPGGSLAIMDMDPDAPSYRRLKSNPFLFSIVKATEPYLDQWFKNAPRIQHLLAETGFSVVRKAAVTGRHFLVVATKAGSIDLRPSDRARAAMDKHLNTWE 1424
            +    IIVDFGCG G STR LA   P+A+ VIG DLSPYM+++G+   +E K               R+   Y D+A T LPD + S VS   +LHE+P+    D L+EAYR+LKPGG L+I++MDP +P Y +L+  P L+SI+++TEPYLD++F     +  +L E GF +V     TGRH   ++ K G+ID R SD  R  +D H    E
Sbjct:   99 IPDDSIIVDFGCGTGTSTRRLAKFFPNAKEVIGFDLSPYMISIGRFLTKELKNYSNITWVDEIYSDDRIEYRYSDIAKTNLPDNSVSFVSICLVLHELPQANTIDILKEAYRILKPGGKLSILEMDPQSPGYVKLRQTPLLYSIIRSTEPYLDEYFGLFSSLPSVLNEIGFPIVSFKEATGRHSTFISIKPGNIDYRVSDIERLKIDSHAQPLE 312

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BLAST of mRNA_H-paniculata_contig11940.1237.1 vs. uniprot
Match: A0A7S1RG62_ALECA (Hypothetical protein n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1RG62_ALECA)

HSP 1 Score: 178 bits (451), Expect = 3.670e-45
Identity = 102/225 (45.33%), Postives = 134/225 (59.56%), Query Frame = 3

Query:  816 QVEKGGIIVDFGCGVGISTRLLADSMPHARRVIGIDLSPYMLAVGQHYNQEK-----------KIGQRVSLIYGDVADTRLPDETASLVSSTYLLHEMPEEAVRDTLEEAYRLLKPGGSLAIMDMDPDAPSYRRLKSNPFLFSIVKATEPYLDQWFKNAPRI-QHLLAETGFSVVRKAAVTGRHFLVVATKAGS-------IDLRPSDRAR--AAMDKHLNTWET 1427
             V   G++VD GCG G STR LA   P A RV+GID+SPY +AVG+   +             +   RV L  GD A T+LPD  AS+VS   ++HE+P +  R    EA+R+L+PGG L I +MD  AP+Y  L++N  LFS+++ATEPYLD +  ++ ++ QHL A+ GF  VR AA TGRHF +VATK GS       ID R  D     A  D HL TWE+
Sbjct:  150 SVPSDGLVVDLGCGTGASTRRLAARFPRAARVLGIDMSPYFVAVGRRLLERAPGPAEPWVATVQSDPRVELHLGDAAHTQLPDACASVVSLFLVIHELPPDVTRSVCAEAFRILRPGGQLWISEMDFRAPAYAELRANALLFSLIRATEPYLDLYADSSEQLFQHLAADIGFQSVRIAAATGRHFALVATKHGSGSGSEGVIDDRRFDAEGNYAVEDTHLKTWES 374

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BLAST of mRNA_H-paniculata_contig11940.1237.1 vs. uniprot
Match: A0A812NFZ9_9DINO (Hypothetical protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812NFZ9_9DINO)

HSP 1 Score: 160 bits (406), Expect = 5.690e-39
Identity = 95/220 (43.18%), Postives = 125/220 (56.82%), Query Frame = 3

Query:  819 VEKGGIIVDFGCGVGISTRLLADSMPHARRVIGIDLSPYMLAVGQHYNQ----------EKKIGQRVSLIYGDVADTRLPDETASLVSSTYLLHEMPEEAVRDTLEEAYRLLKPGGSLAIMDMDPDAPSYRRLKSNPFLFSIVKATEPYLDQWFKNAPRI-QHLLAETGFSVVRKAAVTGRHFLVVATKA----GSIDLRPSDRAR--AAMDKHLNTWET 1427
            V +GG+IVD GCG GISTR LA   P A ++IG+DLSPY +AVGQ   +          +    QRV L   D   T L DE AS V+   ++HE+P +  R    EA RLLKPGG L I +MD  AP Y +L+SNP LF+++++TEPYLD++  +   + +HL      + VR  A TGRHF  V TK      ++D R  D        D HL TWE+
Sbjct:  181 VPEGGLIVDMGCGTGISTRRLAARFPSASQLIGLDLSPYFVAVGQRLMELEPPAETWVTDVVADQRVKLQVKDAEHTGLRDECASNVNLCLVIHELPPDVTRRVCAEALRLLKPGGQLWITEMDFSAPGYVQLRSNPLLFALIRSTEPYLDEYADSTENLFRHLAELDSVASVRLTAATGRHFAAVVTKGPGKGSTLDDRRWDELGNYVVEDTHLQTWES 400

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BLAST of mRNA_H-paniculata_contig11940.1237.1 vs. uniprot
Match: A0A1Q9C0G8_SYMMI (Putative methyltransferase AN0656 n=4 Tax=Symbiodinium TaxID=2949 RepID=A0A1Q9C0G8_SYMMI)

HSP 1 Score: 168 bits (426), Expect = 1.520e-38
Identity = 98/220 (44.55%), Postives = 127/220 (57.73%), Query Frame = 3

Query:  819 VEKGGIIVDFGCGVGISTRLLADSMPHARRVIGIDLSPYMLAVGQHYNQ-EKKIG---------QRVSLIYGDVADTRLPDETASLVSSTYLLHEMPEEAVRDTLEEAYRLLKPGGSLAIMDMDPDAPSYRRLKSNPFLFSIVKATEPYLDQWFKNAPRI-QHLLAETGFSVVRKAAVTGRHFLVVATKAGSIDLRPSDRA------RAAMDKHLNTWET 1427
            V  GG+IVD GCG GISTR LA   P A R+IG+DLSPY +AVG+   + E + G         +RV L   DV  T LPDE A+ V+   ++HE+P +  R    EA RLLKPGG L I +MD  AP Y +L+SNP LF+++++TEPYLD++  +   + +HL        VR  A TGRHF VV TK    + R  DR           D HL TWE+
Sbjct:  833 VPDGGVIVDMGCGTGISTRRLAARFPKASRLIGLDLSPYFVAVGRRLMELEPEAGNWVTDVVADKRVELRVADVESTGLPDECATTVNLCLVIHELPPDITRRVCVEALRLLKPGGQLWITEMDFSAPGYVQLRSNPLLFALIRSTEPYLDEYADSTEELFRHLAELEPVESVRLTAATGRHFAVVVTKGRGKESRLDDRRWDEFGNYVVEDTHLQTWES 1052

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BLAST of mRNA_H-paniculata_contig11940.1237.1 vs. uniprot
Match: A0A813CGD5_9DINO (Hypothetical protein (Fragment) n=1 Tax=Symbiodinium necroappetens TaxID=1628268 RepID=A0A813CGD5_9DINO)

HSP 1 Score: 158 bits (399), Expect = 2.120e-38
Identity = 91/200 (45.50%), Postives = 119/200 (59.50%), Query Frame = 3

Query:  819 VEKGGIIVDFGCGVGISTRLLADSMPHARRVIGIDLSPYMLAVGQHYNQ-EKKIG---------QRVSLIYGDVADTRLPDETASLVSSTYLLHEMPEEAVRDTLEEAYRLLKPGGSLAIMDMDPDAPSYRRLKSNPFLFSIVKATEPYLDQWFKNAPRI-QHLLAETGFSVVRKAAVTGRHFLVVATKAGSIDLRPSDR 1385
            V  GG+IVD GCG GISTR LA   P A R+IG+DLSPY +AVG+   + E + G         +RV L   DV  T LP E A+ V+   ++HE+P +  R    EA RLLKPGG L I +MD  AP Y +L+SNP LF+++++TEPYLD++  +   + +HL        VR  A TGRHF VV TK    + R  DR
Sbjct:  161 VPDGGVIVDMGCGTGISTRRLAARFPKASRLIGLDLSPYFVAVGRRLMELEPEAGNWVTDVVADKRVELRVADVESTGLPAECATTVNLCLVIHELPPDITRRVCLEALRLLKPGGQLWITEMDFSAPGYVQLRSNPLLFALIRSTEPYLDEYADSTEELFRHLAELEPVESVRLTAATGRHFAVVVTKGRGKESRLDDR 360

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig11940.1237.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig11940.1237.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5JWN2_9PHAE	1.680e-107	83.82	Methyltransf_25 domain-containing protein n=2 Tax=...	[more]
A0A6H5LIS9_9PHAE	5.530e-55	52.24	Methyltransf_25 domain-containing protein n=2 Tax=...	[more]
A0A7S3UW00_HETAK	8.740e-51	49.49	Hypothetical protein (Fragment) n=1 Tax=Heterosigm...	[more]
A0A836CDV1_9STRA	4.360e-50	51.83	S-adenosyl-L-methionine-dependent methyltransferas...	[more]
A0A836CP77_9STRA	5.320e-49	52.94	S-adenosyl-L-methionine-dependent methyltransferas...	[more]
A0A7S0SWC6_9STRA	1.220e-47	43.46	Hypothetical protein n=1 Tax=Chromulina nebulosa T...	[more]
A0A7S1RG62_ALECA	3.670e-45	45.33	Hypothetical protein n=1 Tax=Alexandrium catenella...	[more]
A0A812NFZ9_9DINO	5.690e-39	43.18	Hypothetical protein n=1 Tax=Symbiodinium natans T...	[more]
A0A1Q9C0G8_SYMMI	1.520e-38	44.55	Putative methyltransferase AN0656 n=4 Tax=Symbiodi...	[more]
A0A813CGD5_9DINO	2.120e-38	45.50	Hypothetical protein (Fragment) n=1 Tax=Symbiodini...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig11940	contig	H-paniculata_contig11940:131..4542 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Seed ortholog score	309.7
Seed ortholog evalue	9e-82
Seed eggNOG ortholog	2880.D8LD42
Hectar predicted targeting category	other localisation
EggNOG free text desc.	Methyltransferase domain
EggNOG OGs	2B2D0@1,2S0CH@2759
COG Functional cat.	S
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA
Exons	2
Model size	3519
Cds size	540
Stop	1
Start	1

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig11940.1237.1	prot_H-paniculata_contig11940.1237.1	Halopteris paniculata Hal_grac_a_UBK monoicous	polypeptide	H-paniculata_contig11940 1021..2453 +

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622928910.2663465-UTR-H-paniculata_contig11940:130..1020	1622928910.2663465-UTR-H-paniculata_contig11940:130..1020	Halopteris paniculata Hal_grac_a_UBK monoicous	UTR	H-paniculata_contig11940 131..1020 +
1691480663.975017-UTR-H-paniculata_contig11940:130..1020	1691480663.975017-UTR-H-paniculata_contig11940:130..1020	Halopteris paniculata Hal_grac_a_UBK monoicous	UTR	H-paniculata_contig11940 131..1020 +
1622928910.329987-UTR-H-paniculata_contig11940:2453..4542	1622928910.329987-UTR-H-paniculata_contig11940:2453..4542	Halopteris paniculata Hal_grac_a_UBK monoicous	UTR	H-paniculata_contig11940 2454..4542 +
1691480664.0187502-UTR-H-paniculata_contig11940:2453..4542	1691480664.0187502-UTR-H-paniculata_contig11940:2453..4542	Halopteris paniculata Hal_grac_a_UBK monoicous	UTR	H-paniculata_contig11940 2454..4542 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622928910.284709-CDS-H-paniculata_contig11940:1020..1223	1622928910.284709-CDS-H-paniculata_contig11940:1020..1223	Halopteris paniculata Hal_grac_a_UBK monoicous	CDS	H-paniculata_contig11940 1021..1223 +
1691480663.985868-CDS-H-paniculata_contig11940:1020..1223	1691480663.985868-CDS-H-paniculata_contig11940:1020..1223	Halopteris paniculata Hal_grac_a_UBK monoicous	CDS	H-paniculata_contig11940 1021..1223 +
1622928910.3089783-CDS-H-paniculata_contig11940:2116..2453	1622928910.3089783-CDS-H-paniculata_contig11940:2116..2453	Halopteris paniculata Hal_grac_a_UBK monoicous	CDS	H-paniculata_contig11940 2117..2453 +
1691480664.0033996-CDS-H-paniculata_contig11940:2116..2453	1691480664.0033996-CDS-H-paniculata_contig11940:2116..2453	Halopteris paniculata Hal_grac_a_UBK monoicous	CDS	H-paniculata_contig11940 2117..2453 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at H-paniculata_contig11940:131..4542+
coding sequence from alignment at H-paniculata_contig11940:131..4542+

protein sequence of mRNA_H-paniculata_contig11940.1237.1

>prot_H-paniculata_contig11940.1237.1 ID=prot_H-paniculata_contig11940.1237.1|Name=mRNA_H-paniculata_contig11940.1237.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=180bp
MPHARRVIGIDLSPYMLAVGQHYNQEKKIGQRVSLIYGDVADTRLPDETA
SLVSSTYLLHEMPEEAVRDTLEEAYRLLKPGGSLAIMDMDPDAPSYRRLK
SNPFLFSIVKATEPYLDQWFKNAPRIQHLLAETGFSVVRKAAVTGRHFLV
VATKAGSIDLRPSDRARAAMDKHLNTWET*

mRNA from alignment at H-paniculata_contig11940:131..4542+

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_H-paniculata_contig11940.1237.1 ID=mRNA_H-paniculata_contig11940.1237.1|Name=mRNA_H-paniculata_contig11940.1237.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4412bp|location=Sequence derived from alignment at H-paniculata_contig11940:131..4542+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
CACTTGAATGTAATTATTTGGCTATTTAGGTTGACATCTTTTCACCCTCG
TATGCCTCAGAATGTGCACGAAACCCCTTTTCTCGAGTGAGTACTTTTGT
GCATCCTCCGTCAAGTTCAAGCTATAGATTTCTCCGAGCGCTCGCTGGTG
GTGCAACGCGAAGAAATATTTCTGGTGTTTCCAAGAGCTCTTAATTCCAA
TGTAGGACGGAGAAGAATACAATTTACAATGTCGCCTGGCGAGCGGCTCG
TGTTTTTCATACTCTCGTACGTCGATTCCGGGATTTGTTTTTTCTCCTAT
TGCAGTCGGTCCTGAAAGTTGGTTGATCATGAGGCGCAGCTTTGAAAAAC
GGTCTGAACTGGTCTCTATAATATGGACGCGTAATACAAACATTACGTTG
AGTTGTCTCGTCGGATAAGGGTGACCGTTTCACGGGGGACTAAGTACGTC
ATCTCGACGGTTCAGACCTCCCGCCGACACCCGCGTGAACACACACCCCT
TCAGTCAACGGATCCACGTTGTCGCGTGTGCATAGAAACGGTAAACAGGT
GCAAAAGATAGCGCGAAACACACGAGCATGAAGGGGTTTGTGCTCAAAGT
CGTACTCCTGCAATTTGGGTCGTTTGTCCGTGTTGAGAAAATACATATGA
TATATATATATATATACATATATCGGAGCATCACGTATTATGTATGTCTG
TTGTGTGTGTCCTTCCACATCATGTGTGTTCCAACAACAAAGTACCTCCT
AGTTACACGTTGATCATTTGACCTAGATTACTGATCCAGTCATCACTTAT
CATTCATCTGATTTGCAGGTGGAGAAAGGCGGCATCATCGTAGACTTCGG
ATGCGGCGTCGGCATTTCTACGCGCCTGCTTGCCGATAGCATGCCTCACG
CACGCCGGGTTATCGGTATAGATCTGTCTCCGTACATGCTGGCCGTGGGC
CAGCACTACAACCAGGAGAAGAAGATCGGACAGCGTGTGTCGTTGATCTA
TGGGGATGTTGCCGACACGCGCCTGCCTGATGAGACGGCGTCGCTAGTGT
CGTCCACGTACCTACTACACGAGATGCCAGAGGAGGCAGTGAGGTATGTC
AAACGTTCGAAGTTTCTTTGTGATTTATTTACTGGGTTATAATTCGCATT
TTTTTTTAAGGAAATCGTTGTGTCATTTGGTAATAGATTATACAAAATTG
TTTCTGCCTCTTTTGTGCATGATTCTACGATGATGTCGTTGATGTATTCG
ATACAGAGCTATGTCGGAGTCTCAATTTACACAGTGAACGTAGGCGTGGG
GTACGCAAGTAGTCAGTACGTGATCTGGAAATTTGAATGGACCCTTTCAC
GTGAGTGGCGTGTTGGCTGTGACAACAAGCTGTTGCATTTTTTTGTGCAC
AAAGTGGTGCCCGTTTCAGGTGTTGATAGAAATTGGAGTTAAACACAAGG
TGCTGCTGTTGACGGAGGATTATCAACCTGCCCCGAACAATCATAGCTAG
TCCGTTAAAGCCATCGTTACAAGAAAGCACGAAAATTTTGCGTTTCTTCG
AGGCAATGAGAAACCAAACAGTGCTTGTCCCACGTCCTGCCCTGTGACCC
CGAGTAGTGTTGAAGATCCATTTTATGTTAATGTCATGCTTGAGGTAGGT
TGAGGCATACTGCAAACTGTTGCTTTGAGGTGTACCACGTGAGTCCCATC
AGTATTGTGTGGGATTACCACGTTAACACAGCATCGTCGATCCTTCGAAG
CACGGGTAAAAGCCGCGTAGTGAAGTCTTGCCTTTGTTGGAATGTGATAC
CCCCTCCCCGTAACAAAGCTCCGTCCTCCCGTACATGCGTGGCCAATGGC
CGACCAGCTATGGCATGCAAAACATGTGTACGCCGCCCTCAAACTTATTA
GTTATCCATGCACACTTATTCGACGAGAAATATCTCATACTCCTCCCTCG
CCCGCACGTATTGTGTCTCTCGCGTATTATCGTCAGGGACACTCTCGAGG
AGGCCTATCGTCTGCTGAAGCCTGGCGGGAGCTTGGCCATCATGGACATG
GACCCTGACGCCCCTAGCTACAGGAGGTTGAAGAGCAACCCATTCCTGTT
TTCGATCGTGAAGGCCACGGAGCCCTACCTTGACCAATGGTTCAAGAACG
CTCCGCGAATCCAGCATTTGCTGGCAGAGACGGGGTTTAGCGTTGTCAGA
AAGGCAGCCGTTACCGGGAGGCATTTCTTGGTAGTGGCCACCAAGGCAGG
CTCGATTGACCTACGCCCGTCTGACCGCGCACGGGCAGCGATGGACAAAC
ACCTCAACACATGGGAGACTTGAAAAAAAGGCGTGCAACAACGATGGATA
TAGTCGCAGAGATGTGTTTTTTAGATACAGTGAAGAGGAGGGGAGAGGGG
GGAGGAGCATGCCGGCTGGGGCATGTGTCTGATGCGCGGGGGGTACGCCA
CGGTGGCCCTCTCTTCAAAAGAAGAGGATGCACTGACTGCGCGCTGCGCT
GAACACGTTTTCCAGCATCTATCAGCAAAAATTGTCGTAACACCATAAAA
CTGACGCACATATAACTCATATCAGGCTTATATTATCTAGTCTATTATCA
CAGGTTGCATGCGTAAAGCGGGGTAATACTGTGCACCTCGTGTTTATTGC
AATTTTTGAAAGAGGGGAAGGTATCGTGTACCTGTAGTAGTTAGTAGTGG
GAGGAGGGATGGTTTTTGTGTGTTGTCACTGAGTCTGCATCCTCGATTGA
CCCGAACAAGAAATGGATCGAACAGAGGAGGCATAATTGTGGCGGGATTG
TAGCTGCCCCCCCCCCCCGGCATTTCGTAGACATTTGGATGTAGCAGCAT
CGTATTTCATGGGCAGAGAGAGACATTATCGGCTAGAGTCAGGCGACGAA
GATCAGCGCATGGTCCTCCATCCTGCCCCCCTTCCTTTGCGTGTCCGGCC
TACACCTGACAATCTACGTGACTAACGTGTGGTGCGGTGAGTAATCGTGC
TACTGGACAGTGCAGACGCCGATCAAGTAGGTCAAGCACGATGTCTGGCT
GGTAGTTTGTTCTAGGAATAGATTCGGCGAGCGATGCACGGAAGTCCTCA
GAAAGTGGACGTGTTGCAAACGAGGAGTACCGGCCGTCTTGTGCTGGAAG
TTATGTCGTTATTCAGAGCGTTGGTGTCCTTTCAAGTGTGGAATCAAAAC
CAAGCTATGTGTTGCGTTGTGGTACGTTTTGTGTTTATATATGTGTCGTC
CAAGTGAACCGTTTTGTGATATTGCATCATGCGGGTGTGAGTTTTATGGG
TTTCTCTTTGAGCTGCTCGTGTGCGGGGTGGTCAGTAGGTTTTTCAGCAG
AGAACTGGCGCACTTTTGCCGTCCGTGCCTTAATATTGCGGAGATGCGAC
TTGGAGATTTACTCTCCGCCCTTCGTTCCCTCCACCCCACTTGTCCATAG
GGTTGGTGACTTAAAGAACCGTTAGTAGTGGGCTAAGTATATGATTGGGT
TTCTTGCATAATTTCGATGTTGTGCAGTAAAACGAGCCGTTGCGGAGATG
ACCTCAACATGAGTATGCGTACGTCACCACCTGCCACGTCGCTTCGTGTT
ACGTGGCATGGCATGGCGTGTTGTGTTGTGGTTCATTGTCGGCGTATGTT
GGAGGGTAAGGAGAATGACCGTGGCGGCGTTCTCTTTTCGGGACCGTCGT
GTCGATCACCGGGAATTATGTGGCGTTGCGGTGTATTTGACGGCCATCTT
TTTCGTTCTTCGGGTGAGTGTTGCATGGAGAATGGCATGTGACGTATGTA
CATATTATCTATTCGTGGTGTTGCAACGTCGGTTTGTGTCGACGTTGGGG
GGGCGATTGAGGCAAAAGAGGCGTTTCACATGACAGCGCATGATCAGCGT
TGACTGCTTCTCTCCGGAATTCATGCTAAGCGCGTGCCTGTTGTGTGGTG
TATTGTTAATAGTAATGTTGTTGGTTATGTCTGCATAGGTGGTGGGCAAG
GGGGAACGGTCGTCGGCAGTGTCCCCACCCCTCCGGTGTATTATTACCCA
TCATTCTAGTTGCGTATGGTACAGGTCGCCTGTAGCATGTCGGAGTGTCA
GGGTGTCCGATCGATTGACGCAGAGTGGGACGCTTTCAGCAATGTAATAA
TATTACATCTGGAACAATCCGACCTTATTTGCAGCATCATTATGTGTCAT
GTGATATGGCAAGTATATTTGCTCCATGTCTACCATGAGGGTCTCAGACC
CGCAGCCCTAAAGCAACAGGGATGTGCTTATGTTCTATACCTCGCGCCGT
CGAGGAGGAGGCGTAAAAGACAGCATCGCCCAGCTTCGTGTGCGAAACCC
ATAGTCCACATGAGCAAAAATTAAAATGCGGTTGTGTTTTATCTCAACCA
AAGGTAATGGGT

Coding sequence (CDS) from alignment at H-paniculata_contig11940:131..4542+

>mRNA_H-paniculata_contig11940.1237.1 ID=mRNA_H-paniculata_contig11940.1237.1|Name=mRNA_H-paniculata_contig11940.1237.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1080bp|location=Sequence derived from alignment at H-paniculata_contig11940:131..4542+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCCTCACGCACGCCGGGTTATCGGTATAGATCTGTCTCCGTACATGCT
GGCCGTGGGCCAGCACTACAACCAGGAGAAGAAGATCGGACAGCGTGTGT
CGTTGATCTATGGGGATGTTGCCGACACGCGCCTGCCTGATGAGACGGCG
TCGCTAGTGTCGTCCACGTACCTACTACACGAGATGCCAGAGGAGGCAGT
GAGATGCCTCACGCACGCCGGGTTATCGGTATAGATCTGTCTCCGTACAT
GCTGGCCGTGGGCCAGCACTACAACCAGGAGAAGAAGATCGGACAGCGTG
TGTCGTTGATCTATGGGGATGTTGCCGACACGCGCCTGCCTGATGAGACG
GCGTCGCTAGTGTCGTCCACGTACCTACTACACGAGATGCCAGAGGAGGC
AGTGAGGGACACTCTCGAGGAGGCCTATCGTCTGCTGAAGCCTGGCGGGA
GCTTGGCCATCATGGACATGGACCCTGACGCCCCTAGCTACAGGAGGTTG
AAGAGCAACCCATTCCTGTTTTCGATCGTGAAGGCCACGGAGCCCTACCT
TGACCAATGGTTCAAGAACGCTCCGCGAATCCAGCATTTGCTGGCAGAGA
CGGGGTTTAGCGTTGTCAGAAAGGCAGCCGTTACCGGGAGGCATTTCTTG
GTAGTGGCCACCAAGGCAGGCTCGATTGACCTACGCCCGTCTGACCGCGC
ACGGGCAGCGATGGACAAACACCTCAACACATGGGAGACTTGAGGACACT
CTCGAGGAGGCCTATCGTCTGCTGAAGCCTGGCGGGAGCTTGGCCATCAT
GGACATGGACCCTGACGCCCCTAGCTACAGGAGGTTGAAGAGCAACCCAT
TCCTGTTTTCGATCGTGAAGGCCACGGAGCCCTACCTTGACCAATGGTTC
AAGAACGCTCCGCGAATCCAGCATTTGCTGGCAGAGACGGGGTTTAGCGT
TGTCAGAAAGGCAGCCGTTACCGGGAGGCATTTCTTGGTAGTGGCCACCA
AGGCAGGCTCGATTGACCTACGCCCGTCTGACCGCGCACGGGCAGCGATG
GACAAACACCTCAACACATGGGAGACTTGA