mRNA_H-paniculata_contig5084.12370.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig5084.12370.1
Unique NamemRNA_H-paniculata_contig5084.12370.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig5084.12370.1 vs. uniprot
Match: D8LFB5_ECTSI (Calcium-transporting ATPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFB5_ECTSI)

HSP 1 Score: 586 bits (1510), Expect = 2.540e-194
Identity = 314/397 (79.09%), Postives = 344/397 (86.65%), Query Frame = 1
Query:  187 RAAAAMAPR--TRQHSLRNSLVKEPSVLTHDGNAA-FGLSARQILEMNEDGLSEDNMRALRAIGGPPALAELLDSDISSGLARDDDLELRANEFGRNWMPVPDPKTWIQLFIDSFDDTTLIILIVSAIVSLAVGFYSDPAKGWVEGVAILCAVLVVAVVTATNDYSKDKQFRALNAVKDDVTVQVVRGGEILEMSTRNLLVGDVVLLEAGDKIPADGVLTQGDDVTVNESSLTGEAEDVRKESEDGGGMVERDAFMLSGCTLTSGRATMMVIAVGAESRWGRIKAKLQEEPSDTPLQEKLDTMAANIGYVGMACAAATFVATLCVYFTTHRELDSAHLGEHVDTVFEHILHAFVLSVTIVVVAVPEGLPLAVTISLAYSTSKMLKDNNLIRVLAVSE 1368
            RA A MA R  TRQHSLR   V+EPSVL H      +G+S R+IL MN+DGL+E N++ L  +GG   LA++L SD++ GL + D+LE RA EFG NWMPVPDPKTWIQLFIDSFDDTTLIILIVSA+VSLAVGFYSDP  GW+EGVAILCAVLVVAVVTATNDYSKDKQFRALNAVKDDV VQVVR GEI EMSTR LLVGDVVLLEAGDKIPADGVLT GDDVTVNESSLTGEAEDVRK  + G G    DAF+LSGCTLTSGRA+MMV+AVGAESRWGRIKAKLQ+EPSDTPLQEKLD MAA IGYVGMACAAATFVAT+CVYFTTHR ++SA LGE VDT+FE++LH+FVLSVTIVVVAVPEGLPLAVTISLAYSTSKML+DNNLIRVLA  E
Sbjct:   13 RAIAIMASRRQTRQHSLRKQFVREPSVLAHHSAVLIYGISPREILHMNQDGLTEQNLQELNDLGGADKLAKMLRSDVTQGLPKGDNLEERATEFGHNWMPVPDPKTWIQLFIDSFDDTTLIILIVSAVVSLAVGFYSDPKNGWIEGVAILCAVLVVAVVTATNDYSKDKQFRALNAVKDDVKVQVVRAGEIREMSTRELLVGDVVLLEAGDKIPADGVLTLGDDVTVNESSLTGEAEDVRKGVKVGAG---EDAFLLSGCTLTSGRASMMVVAVGAESRWGRIKAKLQDEPSDTPLQEKLDAMAATIGYVGMACAAATFVATMCVYFTTHRVVESAQLGERVDTLFENVLHSFVLSVTIVVVAVPEGLPLAVTISLAYSTSKMLRDNNLIRVLAACE 406          
BLAST of mRNA_H-paniculata_contig5084.12370.1 vs. uniprot
Match: A0A7S2Y0W6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y0W6_9STRA)

HSP 1 Score: 371 bits (952), Expect = 8.940e-119
Identity = 212/365 (58.08%), Postives = 262/365 (71.78%), Query Frame = 1
Query:  280 AAFGLSARQILEMNEDGLSEDNMRALRAIGGPPALAELLDSDISSGLARDD--DLELRANEFGRNWMPVPDPKTWIQLFIDSFDDTTLIILIVSAIVSLAVGFYSDPAKGWVEGVAILCAVLVVAVVTATNDYSKDKQFRALNAVKDDVTVQVVRGGEILEMSTRNLLVGDVVLLEAGDKIPADGVLTQGDDVTVNESSLTGEAEDVRKESEDGGGMVERDAFMLSGCTLTSGRATMMVIAVGAESRWGRIKAKLQEEPSDTPLQEKLDTMAANIGYVGMACAAATFVATLCVYFTTHRELDSAHLGEHVDTVFEHILHAFVLSVTIVVVAVPEGLPLAVTISLAYSTSKMLKDNNLIRVLAVSE 1368
            + + ++ +Q+  +N+  L++ N   L+ +GG   LA  L + +  GL RDD  DL  R    G N MP PDPK+W+QLF +SF+D TLIILIVSA++SLAVGFY DP+KGW+EG AIL AVL+VAVVTATNDYSK++QFR LN VKD++ V+V+R G  +E+ST +LL GDVV+LEAGDKIPADGV   G D   NE+SLTGE EDV K     GG    D F+LSGC LT+G   ++V AVG  S+WGRIKA L  E  DTPLQEKLD++A  IGY+GM  A  TF+AT+  ++     +D    GE  D V E +L AF+LSVTIVVVAVPEGLPLAVTI+LAYST KMLKDNNLIRVLA  E
Sbjct:    2 SGWDITPKQLEAINQSQLADSNKAELQKLGGIEGLARKLGTSLDQGL-RDDKADLVKRGRALGVNHMPEPDPKSWLQLFFESFEDATLIILIVSAVISLAVGFYDDPSKGWIEGAAILAAVLIVAVVTATNDYSKEQQFRQLNRVKDNINVKVIRNGVQIELSTHDLLCGDVVVLEAGDKIPADGVYIFGTDAVSNEASLTGEPEDVVKGLLSEGG----DPFLLSGCQLTAGACKILVTAVGPASQWGRIKAHLATEQQDTPLQEKLDSLAQTIGYIGMFFAVLTFIATMWQWY-----IDK---GEEDDLV-EQLLDAFILSVTIVVVAVPEGLPLAVTIALAYSTKKMLKDNNLIRVLAACE 352          
BLAST of mRNA_H-paniculata_contig5084.12370.1 vs. uniprot
Match: A0A7S1UDM4_9STRA (P-type Ca(2+) transporter (Fragment) n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UDM4_9STRA)

HSP 1 Score: 346 bits (888), Expect = 1.620e-105
Identity = 200/352 (56.82%), Postives = 241/352 (68.47%), Query Frame = 1
Query:  316 MNEDGLSEDNMRALRAIGGPPALAELLDSDISSGLARDDD-LELRANEFGRNWMPVPDPKTWIQLFIDSFDDTTLIILIVSAIVSLAVGFYSDPAKGWVEGVAILCAVLVVAVVTATNDYSKDKQFRALNAVKDDVTVQVVRGGEILEMSTRNLLVGDVVLLEAGDKIPADGVLTQGDDVTVNESSLTGEAEDVRKESEDGGGMVERDAFMLSGCTLTSGRATMMVIAVGAESRWGRIKAKLQEEPSDTPLQEKLDTMAANIGYVGMACAAATFVATLCVYFTTHRELDSAHLGEHVDTVFEHILHAFVLSVTIVVVAVPEGLPLAVTISLAYSTSKMLKDNNLIRVLAVSE 1368
            +NED +   N  AL  +GG   L+E+L +D+  GL  D   L  R   FG N MP P+ KTW+ LFIDSFDD TLI+LIVSAIVSL VG Y DPAKGW+EG AIL AVL+VA+VTA NDYSK+ QFR LNAVKDDV V+V RGG   E++ ++++VGDV+LLE+GDKIPAD V+  G   T +ESSLTGE E+  K +         D F+LSGC +T G A  M IAVG  SRWGRIKA L  E +DTPLQEKL+ MA  IG  G A AA T V  + +++ +             +  FE  L AF+L+VTIVVVAVPEGLPLAVTISLAYST+KM+KDNNLIR LA  E
Sbjct:   14 INEDQMDVQNAEALAGLGGVEGLSEMLGTDLKEGLEADAAALAERRAAFGSNEMPPPEAKTWLDLFIDSFDDATLIVLIVSAIVSLGVGLYEDPAKGWIEGAAILAAVLIVAIVTACNDYSKELQFRKLNAVKDDVEVKVQRGGGQQEVNVKDVVVGDVILLESGDKIPADAVVCPGSSCTCDESSLTGEPEERPKSA-------HSDPFLLSGCQVTDGSARAMAIAVGRNSRWGRIKASLAVESADTPLQEKLEVMANTIGMYGGAMAAITAVVMVSMWYCSANPEPPISW----ENGFEVALEAFILAVTIVVVAVPEGLPLAVTISLAYSTTKMMKDNNLIRQLAACE 354          
BLAST of mRNA_H-paniculata_contig5084.12370.1 vs. uniprot
Match: A0A7S3HU55_9STRA (P-type Ca(2+) transporter (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HU55_9STRA)

HSP 1 Score: 339 bits (869), Expect = 1.020e-104
Identity = 187/360 (51.94%), Postives = 245/360 (68.06%), Query Frame = 1
Query:  292 LSARQILEMNEDGLSEDNMRALRAIGGPPALAELLDSDISSGLARD-DDLELRANEFGRNWMPVPDPKTWIQLFIDSFDDTTLIILIVSAIVSLAVGFYSDPAKGWVEGVAILCAVLVVAVVTATNDYSKDKQFRALNAVKDDVTVQVVRGGEILEMSTRNLLVGDVVLLEAGDKIPADGVLTQGDDVTVNESSLTGEAEDVRKESEDGGGMVERDAFMLSGCTLTSGRATMMVIAVGAESRWGRIKAKLQEEPSDTPLQEKLDTMAANIGYVGMACAAATFVATLCVYFTTHRELDSAHLGEHVDTVFEHILHAFVLSVTIVVVAVPEGLPLAVTISLAYSTSKMLKDNNLIRVLAVSE 1368
            LSA+ +   N+D     N + L  +GG   L   L +D   GL+ D  DL  R   +G+N  P P+ ++W ++FI+SF D TLI+LIV+A+VS  VG   DPAKGW+EG AIL AVLVVAVVTATN+++K+ QFR LNAVKDDV V V+R G    +  + L+VGDV++L AGD++P DG+L  G DVT NES+LTGE++D +K  +      E D FMLSG +L +G A ++V AVG  SRWG+ KAKL  E  DTPLQEKLDT+A  IG +GM  A ATF+A + +++    + D          ++E++L AF++ VTIVVVAVPEGLPLAVT+SLAYST KM+ DNNLIRVLA  E
Sbjct:    2 LSAKDLASFNDDQDIALNEKMLEKVGGIKGLETKLKTDYKKGLSGDAKDLAQRIELYGKNEFPEPESQSWFEMFIESFQDATLIVLIVAAVVSFVVGLIEDPAKGWIEGAAILFAVLVVAVVTATNNFNKESQFRKLNAVKDDVKVGVLRNGVATTIDVKKLVVGDVLILNAGDRVPTDGLLVDGSDVTCNESALTGESDDKKKSFKPSSDGEEGDIFMLSGSSLATGYAHVLVTAVGESSRWGKTKAKLAAETVDTPLQEKLDTLANQIGNLGMFAAGATFIAMIAIWYMYPEQRDPEL------NIYEYVLKAFIMGVTIVVVAVPEGLPLAVTLSLAYSTQKMMLDNNLIRVLAACE 355          
BLAST of mRNA_H-paniculata_contig5084.12370.1 vs. uniprot
Match: A0A7S2DNE9_9STRA (Calcium-transporting ATPase n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DNE9_9STRA)

HSP 1 Score: 347 bits (889), Expect = 7.450e-104
Identity = 188/361 (52.08%), Postives = 254/361 (70.36%), Query Frame = 1
Query:  286 FGLSARQILEMNEDGLSEDNMRALRAIGGPPALAELLDSDISSGLARDDDLELRANEFGRNWMPVPDPKTWIQLFIDSFDDTTLIILIVSAIVSLAVGFYSDPAKGWVEGVAILCAVLVVAVVTATNDYSKDKQFRALNAVKDDVTVQVVRGGEILEMSTRNLLVGDVVLLEAGDKIPADGVLTQGDDVTVNESSLTGEAEDVRKESEDGGGMVERDAFMLSGCTLTSGRATMMVIAVGAESRWGRIKAKLQEEPSDTPLQEKLDTMAANIGYVGMACAAATFVATLCVYFTTHRELDSAHLGEHVDTVFEHILHAFVLSVTIVVVAVPEGLPLAVTISLAYSTSKMLKDNNLIRVLAVSE 1368
            F LS   +  +N+     +N+ AL+ +GG   L + L +         + L LR   FG N MP P+ K++IQLFID+F+DTT+IIL VSA+VSL  G Y DP KGW+EGVAIL AVLVVA+VTA NDY K+KQFR LN V +D+ ++V R GE++++ST+ ++VGD+VLLE+GDKIP DGV+ + + ++ +ES LTGE  ++RK+ E          F+LSGC +T G AT +VIAVG ES+WGRI+A L +E S+TPLQ+KLDT+A  IG+VG+  A  TF A + V+ TT  E+ ++ L       F+ +L +F++ VTIVVVAVPEGLPLAVTISLAYST++M+ DNNLIRVLA  E
Sbjct:   15 FALSRDDLSGINKPQQDHENLGALKEMGGVEVLLKKLSTSAGGLSETPEALALRKEVFGSNDMPEPESKSFIQLFIDTFEDTTVIILCVSAVVSLGAGMYDDPDKGWIEGVAILVAVLVVAIVTAVNDYEKEKQFRKLNKVAEDILIKVKRNGEVVQISTKQIVVGDIVLLESGDKIPGDGVVLESNVLSCDESDLTGEPVEIRKDHE--------HPFLLSGCNVTGGSATFVVIAVGPESQWGRIRAMLSQEASNTPLQDKLDTLANQIGWVGIGFACLTFAAQISVFLTTAEEITASKL-------FDTVLESFIICVTIVVVAVPEGLPLAVTISLAYSTNQMMADNNLIRVLAACE 360          
BLAST of mRNA_H-paniculata_contig5084.12370.1 vs. uniprot
Match: A0A7S3HU65_9STRA (Calcium-transporting ATPase n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HU65_9STRA)

HSP 1 Score: 339 bits (869), Expect = 3.630e-100
Identity = 187/360 (51.94%), Postives = 245/360 (68.06%), Query Frame = 1
Query:  292 LSARQILEMNEDGLSEDNMRALRAIGGPPALAELLDSDISSGLARD-DDLELRANEFGRNWMPVPDPKTWIQLFIDSFDDTTLIILIVSAIVSLAVGFYSDPAKGWVEGVAILCAVLVVAVVTATNDYSKDKQFRALNAVKDDVTVQVVRGGEILEMSTRNLLVGDVVLLEAGDKIPADGVLTQGDDVTVNESSLTGEAEDVRKESEDGGGMVERDAFMLSGCTLTSGRATMMVIAVGAESRWGRIKAKLQEEPSDTPLQEKLDTMAANIGYVGMACAAATFVATLCVYFTTHRELDSAHLGEHVDTVFEHILHAFVLSVTIVVVAVPEGLPLAVTISLAYSTSKMLKDNNLIRVLAVSE 1368
            LSA+ +   N+D     N + L  +GG   L   L +D   GL+ D  DL  R   +G+N  P P+ ++W ++FI+SF D TLI+LIV+A+VS  VG   DPAKGW+EG AIL AVLVVAVVTATN+++K+ QFR LNAVKDDV V V+R G    +  + L+VGDV++L AGD++P DG+L  G DVT NES+LTGE++D +K  +      E D FMLSG +L +G A ++V AVG  SRWG+ KAKL  E  DTPLQEKLDT+A  IG +GM  A ATF+A + +++    + D          ++E++L AF++ VTIVVVAVPEGLPLAVT+SLAYST KM+ DNNLIRVLA  E
Sbjct:    2 LSAKDLASFNDDQDIALNEKMLEKVGGIKGLETKLKTDYKKGLSGDAKDLAQRIELYGKNEFPEPESQSWFEMFIESFQDATLIVLIVAAVVSFVVGLIEDPAKGWIEGAAILFAVLVVAVVTATNNFNKESQFRKLNAVKDDVKVGVLRNGVATTIDVKKLVVGDVLILNAGDRVPTDGLLVDGSDVTCNESALTGESDDKKKSFKPSSDGEEGDIFMLSGSSLATGYAHVLVTAVGESSRWGKTKAKLAAETVDTPLQEKLDTLANQIGNLGMFAAGATFIAMIAIWYMYPEQRDPEL------NIYEYVLKAFIMGVTIVVVAVPEGLPLAVTLSLAYSTQKMMLDNNLIRVLAACE 355          
BLAST of mRNA_H-paniculata_contig5084.12370.1 vs. uniprot
Match: A0A7S1YV36_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1YV36_TRICV)

HSP 1 Score: 319 bits (818), Expect = 2.000e-98
Identity = 185/336 (55.06%), Postives = 234/336 (69.64%), Query Frame = 1
Query:  361 AIGGPPALAELLDSDISSGLARDDDLELRANEFGRNWMPVPDPKTWIQLFIDSFDDTTLIILIVSAIVSLAVGFYSDPAKGWVEGVAILCAVLVVAVVTATNDYSKDKQFRALNAVKDDVTVQVVRGGEILEMSTRNLLVGDVVLLEAGDKIPADGVLTQGDDVTVNESSLTGEAEDVRKESEDGGGMVERDAFMLSGCTLTSGRATMMVIAVGAESRWGRIKAKLQEEPSDTPLQEKLDTMAANIGYVGMACAAATFVATLCVYFTTHRELDSAHLGEHVDTVFEHILHAFVLSVTIVVVAVPEGLPLAVTISLAYSTSKMLKDNNLIRVLAVSE 1368
            ++GG   L +LLD+D  +G+      ELR   +G N +P     T+ QLF+D+FDD T+ IL+V+A+VSL VG Y DP  G++EGVAIL AVL+V+VVTA NDY K+KQFRAL+ V DDV V VVRGG   ++   ++++GDVV +EAGD+IP DGVL   D + V+ES+LTGE EDV K+       +  D F+LSGCT T G A  + +AVG ES+WG IKA L++E   TPLQEKLD MAA IGYVGMA AAATFVA + +       +  A+L +   +VF H L AF++ VTIVVVAVPEGLPLAVTISLA+ST KML D NLIR LA  E
Sbjct:   97 SVGGQDGLVKLLDTDADAGIDPTT-AELRRERYGCNSLPSSPRATFWQLFVDTFDDATVQILMVAALVSLGVGLYEDPTTGYIEGVAILAAVLIVSVVTAANDYGKEKQFRALSEVNDDVPVVVVRGGRARQIPVADIVLGDVVCVEAGDQIPCDGVLLACDGLEVDESALTGEPEDVDKD-------LASDPFVLSGCTATHGSARFVAVAVGKESQWGVIKAHLEKEQDQTPLQEKLDDMAALIGYVGMAAAAATFVAMMIIKLL----VKPAYLDDV--SVFSHALDAFIIGVTIVVVAVPEGLPLAVTISLAFSTKKMLADQNLIRHLAACE 418          
BLAST of mRNA_H-paniculata_contig5084.12370.1 vs. uniprot
Match: A0A0W8DFA5_PHYNI (Calcium-transporting ATPase n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8DFA5_PHYNI)

HSP 1 Score: 318 bits (814), Expect = 1.530e-95
Identity = 180/368 (48.91%), Postives = 250/368 (67.93%), Query Frame = 1
Query:  277 NAAFGLSARQILEMNEDGLSEDNMRALRAIGGPPALAELLDSDISSGLAR---DDDLELRANEFGRNWMPVPDPKTWIQLFIDSFDDTTLIILIVSAIVSLAVGFYSDPAKGWVEGVAILCAVLVVAVVTATNDYSKDKQFRALNAVKDDVTVQVVRGGEILEMSTRNLLVGDVVLLEAGDKIPADGVLTQGDDVTVNESSLTGEAEDVRKESEDGGGMVERDAFMLSGCTLTSGRATMMVIAVGAESRWGRIKAKLQEEPSDTPLQEKLDTMAANIGYVGMACAAATFVATLCVYFTTH-RELDSAHLGEHVDTVFEHILHAFVLSVTIVVVAVPEGLPLAVTISLAYSTSKMLKDNNLIRVLAVSE 1368
            ++ +G++  ++ ++N+D ++E N+  L  IGG  ALA LL  ++  GL R   D +  +R + FGRN  P    K   +LF++S  DTTLIILI++AI S+  G+   P  GW EGVAIL  V++VA VT+ N+Y+K+KQFRAL+A  DDV V+V+R G+  ++    + VG+V++LE GD++PAD VL  G D+  NESSLTGE +DV K       + ++D F+LS C + SGR   +VIAVGAESRWG+IK+KL  E   TPL EKL+ MA +IGYVGMA + AT VA + +Y T+  ++L+ +           +ILH F++ VTI+VVA+PEGLPLAVTISL+YST KML+DNNLIRVLA  E
Sbjct:   36 SSPYGITLEEVRKLNQDQMTEANLEELARIGGVTALANLLCVNLEHGLPRSEIDTNFTVRRDLFGRNIFPESPMKGLFRLFVESLQDTTLIILIIAAIASMVTGYMEHPETGWSEGVAILFGVILVAGVTSVNNYTKEKQFRALSAKNDDVLVKVLRDGKPDQVPVGEISVGEVIILETGDRVPADAVLINGSDLKCNESSLTGEPDDVSK-------VHKKDPFLLSSCLVASGRGECLVIAVGAESRWGKIKSKLVCEQKATPLMEKLEEMAKHIGYVGMAFSIATMVAMIIIYATSDDKKLEYSWPS--------YILHTFLIGVTIIVVAIPEGLPLAVTISLSYSTKKMLRDNNLIRVLAACE 388          
BLAST of mRNA_H-paniculata_contig5084.12370.1 vs. uniprot
Match: A0A6U6L660_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A6U6L660_9STRA)

HSP 1 Score: 324 bits (830), Expect = 2.400e-94
Identity = 194/359 (54.04%), Postives = 243/359 (67.69%), Query Frame = 1
Query:  292 LSARQILEMNEDGLSEDNMRALRAIGGPPALAELLDSDISSGLARDDDLELRANEFGRNWMPVPDPKTWIQLFIDSFDDTTLIILIVSAIVSLAVGFYSDPAKGWVEGVAILCAVLVVAVVTATNDYSKDKQFRALNAVKDDVTVQVVRGGEILEMSTRNLLVGDVVLLEAGDKIPADGVLTQGDDVTVNESSLTGEAEDVRKESEDGGGMVERDAFMLSGCTLTSGRATMMVIAVGAESRWGRIKAKLQEEPSDTPLQEKLDTMAANIGYVGMACAAATFVATLCVYFTTHRELDSAHLGEHVDTVFEHILHAFVLSVTIVVVAVPEGLPLAVTISLAYSTSKMLKDNNLIRVLAVSE 1368
            ++A Q LE N   L  D      A+GG   + ELLDS    G+A    +E R   +G N +P   P+T+ QLF+D+FDDTT+ IL+V+AIVSLA+G Y DP+ G+VEGVAIL AVLVV+VVTA NDY K+KQFRAL+ V DDV V VVRGG+  ++    +++GD+V +EAGD IP DGVL   D + ++ES LTGE  DV K+       ++ D F+LSGC +T G A  + +AVG +S+WG IKA L+ E   TPLQEKLD MAA IGYVGMA AAATFVA + V       +  A+L +   +VF H L AF++ VTIVVVAVPEGLPLAVTISLAYST KML D NLIR L   E
Sbjct:   93 VNAPQALEQNLKNLHSD------AVGGIDGMVELLDSHPEDGVAPSS-VERRRELYGCNSLPSAPPQTFWQLFVDTFDDTTVQILMVAAIVSLAIGMYEDPSTGYVEGVAILAAVLVVSVVTAVNDYEKEKQFRALSEVNDDVPVLVVRGGKARQIQVGEIVLGDLVCVEAGDNIPCDGVLVACDGMEIDESPLTGEPIDVDKD-------LKEDPFVLSGCAVTHGSARFLAVAVGRDSQWGVIKAALENEQDQTPLQEKLDDMAALIGYVGMAAAAATFVAMMFVKLV----VKPAYLDDV--SVFNHALDAFIIGVTIVVVAVPEGLPLAVTISLAYSTKKMLADQNLIRHLHACE 431          
BLAST of mRNA_H-paniculata_contig5084.12370.1 vs. uniprot
Match: A0A1E7EW09_9STRA (Calcium-transporting ATPase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EW09_9STRA)

HSP 1 Score: 318 bits (816), Expect = 3.320e-93
Identity = 186/352 (52.84%), Postives = 236/352 (67.05%), Query Frame = 1
Query:  313 EMNEDGLSEDNMRALRAIGGPPALAELLDSDISSGLARDDDLELRANEFGRNWMPVPDPKTWIQLFIDSFDDTTLIILIVSAIVSLAVGFYSDPAKGWVEGVAILCAVLVVAVVTATNDYSKDKQFRALNAVKDDVTVQVVRGGEILEMSTRNLLVGDVVLLEAGDKIPADGVLTQGDDVTVNESSLTGEAEDVRKESEDGGGMVERDAFMLSGCTLTSGRATMMVIAVGAESRWGRIKAKLQEEPSDTPLQEKLDTMAANIGYVGMACAAATFVATLCVYFTTHRELDSAHLGEHVDTVFEHILHAFVLSVTIVVVAVPEGLPLAVTISLAYSTSKMLKDNNLIRVLAVSE 1368
            ++NE      N++ L   GG  AL EL+ +    G A +  +  R   FG N +P    K++ QLFID+FDD TL ILIV+AIVSL VG Y DPA G+VEG+AIL A L+V+VVTA NDY K+ QFR L+   D++ V V+R G+  ++    L+VGD+V LEAGD IP DGVL   D + V+ES+LTGE ED+ K+        E D F+LSGCT  +G    + IAVG  S+WG IK+ L++E  +TPLQEKLD MAANIGYVGMA AAATF+A +C+       +D  +L +   +VF+H L AF++ VTIVVVAVPEGLPLAVTISLAYST KML D NLIR LA  E
Sbjct:   27 QINEAQSLPSNLQHLNETGGLKALLELIATHPDHGAA-ETSINKRRELFGSNLLPSSPRKSFYQLFIDTFDDATLQILIVAAIVSLCVGMYDDPAAGYVEGMAILSACLIVSVVTALNDYQKETQFRELSVANDEIDVLVIRSGKFQKIPVGELVVGDLVSLEAGDSIPCDGVLVNYDGLEVDESALTGEPEDIDKD-------FENDPFLLSGCTAVAGSGRFVAIAVGPNSQWGVIKSHLEQEQEETPLQEKLDIMAANIGYVGMAAAAATFIAMMCIKIF----VDPEYLRDV--SVFKHALDAFIIGVTIVVVAVPEGLPLAVTISLAYSTKKMLADKNLIRHLAACE 364          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5084.12370.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LFB5_ECTSI2.540e-19479.09Calcium-transporting ATPase n=2 Tax=Ectocarpus Tax... [more]
A0A7S2Y0W6_9STRA8.940e-11958.08Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A7S1UDM4_9STRA1.620e-10556.82P-type Ca(2+) transporter (Fragment) n=2 Tax=Phaeo... [more]
A0A7S3HU55_9STRA1.020e-10451.94P-type Ca(2+) transporter (Fragment) n=1 Tax=Spume... [more]
A0A7S2DNE9_9STRA7.450e-10452.08Calcium-transporting ATPase n=2 Tax=Dictyocha spec... [more]
A0A7S3HU65_9STRA3.630e-10051.94Calcium-transporting ATPase n=1 Tax=Spumella elong... [more]
A0A7S1YV36_TRICV2.000e-9855.06Hypothetical protein (Fragment) n=1 Tax=Trieres ch... [more]
A0A0W8DFA5_PHYNI1.530e-9548.91Calcium-transporting ATPase n=1 Tax=Phytophthora n... [more]
A0A6U6L660_9STRA2.400e-9454.04Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A1E7EW09_9STRA3.320e-9352.84Calcium-transporting ATPase n=1 Tax=Fragilariopsis... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5084contigH-paniculata_contig5084:6180..14509 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score586.3
Seed ortholog evalue1.1e-164
Seed eggNOG ortholog2880.D8LFB5
KEGG koko:K01537,ko:K05850
KEGG TC3.A.3.2
KEGG Pathwayko04020,ko04022,ko04024,ko04261,ko04925,ko04970,ko04972,map04020,map04022,map04024,map04261,map04925,map04970,map04972
Hectar predicted targeting categoryother localisation
EggNOG free text desc.calcium-transporting ATPase activity
EggNOG OGsCOG0474@1,KOG0204@2759
EC3.6.3.8
COG Functional cat.P
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Exons7
Model size1914
Cds size1224
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930491.8019922-UTR-H-paniculata_contig5084:6179..62291622930491.8019922-UTR-H-paniculata_contig5084:6179..6229Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5084 6180..6229 +
1691481316.3069713-UTR-H-paniculata_contig5084:6179..62291691481316.3069713-UTR-H-paniculata_contig5084:6179..6229Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5084 6180..6229 +
1622930491.81459-UTR-H-paniculata_contig5084:7125..72761622930491.81459-UTR-H-paniculata_contig5084:7125..7276Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5084 7126..7276 +
1691481316.317544-UTR-H-paniculata_contig5084:7125..72761691481316.317544-UTR-H-paniculata_contig5084:7125..7276Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5084 7126..7276 +
1622930491.9177213-UTR-H-paniculata_contig5084:14020..145091622930491.9177213-UTR-H-paniculata_contig5084:14020..14509Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5084 14021..14509 +
1691481316.395005-UTR-H-paniculata_contig5084:14020..145091691481316.395005-UTR-H-paniculata_contig5084:14020..14509Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5084 14021..14509 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930491.8312628-CDS-H-paniculata_contig5084:7276..74231622930491.8312628-CDS-H-paniculata_contig5084:7276..7423Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5084 7277..7423 +
1691481316.326158-CDS-H-paniculata_contig5084:7276..74231691481316.326158-CDS-H-paniculata_contig5084:7276..7423Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5084 7277..7423 +
1622930491.8456206-CDS-H-paniculata_contig5084:9143..93681622930491.8456206-CDS-H-paniculata_contig5084:9143..9368Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5084 9144..9368 +
1691481316.3347664-CDS-H-paniculata_contig5084:9143..93681691481316.3347664-CDS-H-paniculata_contig5084:9143..9368Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5084 9144..9368 +
1622930491.8613393-CDS-H-paniculata_contig5084:10229..103851622930491.8613393-CDS-H-paniculata_contig5084:10229..10385Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5084 10230..10385 +
1691481316.3492076-CDS-H-paniculata_contig5084:10229..103851691481316.3492076-CDS-H-paniculata_contig5084:10229..10385Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5084 10230..10385 +
1622930491.878386-CDS-H-paniculata_contig5084:11274..115741622930491.878386-CDS-H-paniculata_contig5084:11274..11574Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5084 11275..11574 +
1691481316.3586237-CDS-H-paniculata_contig5084:11274..115741691481316.3586237-CDS-H-paniculata_contig5084:11274..11574Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5084 11275..11574 +
1622930491.8902462-CDS-H-paniculata_contig5084:13398..135391622930491.8902462-CDS-H-paniculata_contig5084:13398..13539Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5084 13399..13539 +
1691481316.371963-CDS-H-paniculata_contig5084:13398..135391691481316.371963-CDS-H-paniculata_contig5084:13398..13539Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5084 13399..13539 +
1622930491.902827-CDS-H-paniculata_contig5084:13765..140201622930491.902827-CDS-H-paniculata_contig5084:13765..14020Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5084 13766..14020 +
1691481316.386389-CDS-H-paniculata_contig5084:13765..140201691481316.386389-CDS-H-paniculata_contig5084:13765..14020Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5084 13766..14020 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5084.12370.1prot_H-paniculata_contig5084.12370.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig5084 7277..14020 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig5084.12370.1

>prot_H-paniculata_contig5084.12370.1 ID=prot_H-paniculata_contig5084.12370.1|Name=mRNA_H-paniculata_contig5084.12370.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=408bp
MAPRTRQHSLRNSLVKEPSVLTHDGNAAFGLSARQILEMNEDGLSEDNMR
ALRAIGGPPALAELLDSDISSGLARDDDLELRANEFGRNWMPVPDPKTWI
QLFIDSFDDTTLIILIVSAIVSLAVGFYSDPAKGWVEGVAILCAVLVVAV
VTATNDYSKDKQFRALNAVKDDVTVQVVRGGEILEMSTRNLLVGDVVLLE
AGDKIPADGVLTQGDDVTVNESSLTGEAEDVRKESEDGGGMVERDAFMLS
GCTLTSGRATMMVIAVGAESRWGRIKAKLQEEPSDTPLQEKLDTMAANIG
YVGMACAAATFVATLCVYFTTHRELDSAHLGEHVDTVFEHILHAFVLSVT
IVVVAVPEGLPLAVTISLAYSTSKMLKDNNLIRVLAVSEYVSEYHLCYIY
RYIDLPI*
back to top

mRNA from alignment at H-paniculata_contig5084:6180..14509+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig5084.12370.1 ID=mRNA_H-paniculata_contig5084.12370.1|Name=mRNA_H-paniculata_contig5084.12370.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=8330bp|location=Sequence derived from alignment at H-paniculata_contig5084:6180..14509+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GATAATGGCTCCAGTTACTTCCAAGGACGTTCGCAGCATCTGAGCCTCAC GTGAGTGAATATAACCGCTGTCGGAGTCCAGTTCAGCGTGTTTAACTGAA AGCATGTAGCTAGTTTCGATGATAAATCACAGATGAGGCGTATATTCATC TTACGTGGAACGAAGCTCAAACAAGAGTCAATATTTAAGTGTGATGCCAG AGCTTTTATCATTATCTTCGTTTACAGGACTCACACCCACAAACCTGGAC CTCAGCGCACGTACTCCTGCGTGGGGTATACACCGACTGTCCGGGGGATA GCCCATATTACGATGTTTCCTTGACGTGCATCTAGCCGCGGGATGGGGAC ATGTTGGATTTGCATCTCGCCGCTATAGTATCGGGACATTGCTGTTTTAT ATCTGTTCACTGGTCGACATCCATCGTAATTGAAATGCCGCAGTCGATCT GTTTAGCGTACAAAAAACTTTGAGCCCTATAAGCTTCCAGAAAGCCTACG GACTGACTGTACTGTATGCCGGTCACAAGTCTGCGAGCGTTCGCCAGCCA GCCAGAGACTCGCAACTGTCGTTGCATTGGTCATACGGTAAGGTGGGTGA GCTGGTTATCTCATTTGCAGCAGCAACAGACAGCTCTCGACGTCCGACAT TCGGACGTATTGTATAGTGGAAGGAGAATAGTCCGTGAGTCATACACATC ATGGGTAATCCTTACACTAGCCAAGTAAAAACTAGATTTCCTCCGATCCT CCGACGAGAGGGATCCACAGAGTTATATGGTATTCTTGATCGTTTTCATT TGTTCACTTTGAGCGAGATATCGAGATGCCATATTCGCGAGATCTCGCCG CAAATCCATTCCATATCGCACCAGCCCTCAATATCCATCAAACAGCAACT GCCCCCCCTCCTCCTCTCCTGTGCGTTCCCCGTGACATTCTTCCAGGCCG TGGAGTGTCGGGTCAGTCAAGCCCGTCTTCGTGAGATTAATATTGTATTA TTACTTTATTTAGTACCATACAGTGAAGATATATTGTAATTCAGTGCAAA AGTAAAAGCGGAGGAGTGCGCAACGCGCGCTCAGGGCGGCTGCTGCCATG GCTCCCAGGACCCGGCAGCATAGCTTGCGCAACTCGTTGGTGAAGGAGCC TTCAGTCCTGACTCACGATGGGAATGCTGCGTTCGGCTTGTCCGCGAGGC AGATCCTGGAAATGAACGAGGACGGTCTGTCGGAAGACAATATGGTGGGT GTGCTTCCTGACTTGTACTGCGATATATTTTGAATTTGATTGAGTAGCAG TATAAGTATCGAGTATCGTGTAAATTTAAATTTACACATGGGGCAGGCAT TTTGACTGTTTCGGCAGAGTTGCTGTGTGATGTGGTCAAGGCTGTGTGCT ACTTGTTGATTTCGGCAACCGATCTCTGATGGATCTGCATGAGCCAGGAT GTGCCAACATGTATTCACTTGTTCATAGCGGGATATTTCGTTTTGCGGAT TATATATATATATATATATATATAAGGTAAAAGCTGGCCGTGTTAAGGTT AAAAAAAAAGTAAAAAAATCATGCCTAATGGGTAGATAGGCGGTGGTAGT GTTGTAGAAGAAATATGCAAAGGCATGGATCATCTGCCCGCCAAAAAGAA AGAGGGGGCTCGGGTTTTCCAAGAACTAAGAAGCTCAGACGTTTTTGTGT GGTGTTATTCATAATACAGACGGGAAAAGGAGCGATTCTTAACGATGTTT GAATATTTATTCTCAGCTCATTTGTGCTGTGCGGTGCCAGTGTGCGTGTT TAATCGGTCCCCGCAGCTATAGCTGCGCGGCATGCAGCTTGCTAGCCCAC CACGTGGCTGAGTATGGCTTGCTTGCGTGCACGAAGTTTGCCGGCGATTT CTGTTTTCACCTAGAGGCTAAACTTTACACTGGTGTCCTCGAGAAGCACA GTGCTATCGCACAGGATGGTAGTCACGTAGGTGGGTATTGCCGGCCCATT CTGTTTACTCCAGTTCTTCAGTACAACGAATATTTCGCCAGATGATCGAT GTGCACCAAGAGCAACATCTAGCACCACGAGCACGACGACATATGACAGT TAACTCGCGCCGTGTGATTGATCCTTTCCTCGTCCTGGGTTGCGTGCTTC AGTGCCACCGGTTGCTGACGTAATTTGCTTCCCACTCTACTGGGGAAGTC TCTTGCGAAAAGCGTGGCAAGCAAGTCTCCCCGTCTCCTCATGTATCTTT TACCCGGGAAGCATTGATTAATCTGTTGTGTTTCGTCAGTGAAATCCTTT ATTTATTATCGGATTAATGAACCGAATCATGTCGCAAGTGTCACACTCTT GACGTTTGATCAATAGTGTTGAAGAATCACAAGAAATTGAGCTCCAGTTG TGGCCGGATTGTTCTTTTGAGTGTATTTCTGTCTCCCCCCAAATGACTAG GATGAGGACAAATATTAAATGGTCGCCTGAGCCTTTACGAATGTGCGAAG AGATAGAATATACTGCTGCCCCCGCTGACCCCTTGTCAATTCGTGTTAAA TAGTGTAATTCGGAGCAATCGTGAATGGTTCGGGGCACATATAATGGTCG TGTTCCATCATCCTGAATTTTCATGCCAAGACTTTTCAATTTTCGTTACG AATGCCCTAAGTATTCATAACTCATCCTGGGGATGAATGCTATTATTCTT GAGAAAAAAGCGAGACTGATTCATAATTATGGAAATAAAAAGGTGCTGGA TGTCCCCGAAAATGAGATTTTTAGCGATGAATATATGTGAGGCACAAGGG CTAGCTTCGCGGCCATCGGCAAATATCCGGAATCAACTCTCTCAACCCTC GCCAGCCGTCATAGTACATGAATCTTGGACGTTATTATGTCTCGCTTCAC GGACTAACTAGAATAATTCCAAGTTTGGCATGATTTAACGTTTTCAACTT CCTGTATAACGCAGAGAGCGCTGAGGGCAATAGGAGGGCCGCCGGCGCTG GCAGAGCTACTCGATAGCGATATTTCGTCTGGTTTGGCGCGAGATGATGA CCTAGAACTCAGGGCGAACGAGTTCGGCCGCAACTGGATGCCTGTCCCCG ACCCCAAGACGTGGATCCAGCTGTTCATCGACAGCTTCGACGACACGACC TTGATCATTCTTATCGTCTCTGCGATCGTGTCTCTCGCGGTGTGTGATGA GTACATATATATTTATGTATATATGTGTTTATGTGTATATATATAGTGTG TGCTTACGTTTTGGGGGGGGAAATATGACGAACCATGATGTAATTCAGCT CAGTTAATTTAAGTTCATGAGCTTTGCTGTTGTAACTCCTCTACCTCTTG TGTTCCCATGTGGAGAGGAGGGAACGGTTCTGGGATTCCTATCCCATGGT TCGGAAAAAAGAAAGCCAACAATAATGGCTGTATGCATGTTTCATCTATC TATCTCATGACTTTCCTGTGCAGTCAAGATCCCCATGTAAGTGGTGCGTT GTGTAAGGGTCAAATAAAAGATGTTGTAAGGATTCAGGATTTTGACGAGT AAGGTACCCTTTTTTTTTCTGCTGAGCGTTTTTGTAGCTTGTCTGGCTGG TCTCGTTTGCTTTTCATTTTTTGTCATGTTCTCTAGTAGTTGATGATTGC TTGCTTGCTTGCTTGCTTGCTTGCTCCCTCTTACATGACTCGATGCAGGG TTCTGGGGTTGGGGTCAAGGTTGACTAGCCAACTTTTACGTTGTTTCTCG TGACTTTTCGTACACGAACATAGCAGTGATGACACTTGATAAGGATTGGC AATTGTGTTCTTACATTTTTATCGTTTTAATTAAGTCAACTGGGACGGGG ATTTATATATATATATATATGAAAAAAAATCTAGAGCACCCCGGCCTTTG ATGTGATCGTTTAGATGGGAAGTCGCCGTTATCCAGATATTAGCCAGCCG TGTCAAGCTTCAAGTGAACATGTATCGATGTATCGAGAAAGCAGTTCGTT GCCCTCCTTGTGAATCAATCGCGCACTGTTATGCTACGCATCGAATAAAG GTCGGTTTCTACAGCGACCCTGCGAAAGGTTGGGTGGAAGGCGTGGCAAT TCTGTGCGCTGTGCTGGTGGTGGCGGTAGTGACAGCAACAAATGACTATT CAAAGGACAAGCAGTTCAGGGCGCTTAACGCCGTGAAGGATGACGTCACT GTACAGGTAAGTCGAAGTCCGAGTGCGAGTTTGCTTGGGAGTTGACATAT GCAAAAAAACGTTTACGCATTCTGGGGTTGCGTTAGGACTAAATGCAGAG TGAGGGCCACGGTTACGTTTGTGCAGTCGGTGTCTTCTGTGCTCAGTCAA GGCCTGAGCTAATTTTTTTTTGGAAAATCTGTGACTCTTAGAGGATCCAT TAAAGATTCATGTTTCAAAAGATACTCGAGTACAATATAATTTTTACCCT TCGGAATCGTCATCACCTCGGTGTGCTATGTAATATATGTACTCGGGGCT AGTTGTTTAGATACTTAGGCTATTCCGCATCCGACCGTATCATGCTGTGC CAAGTGTTCGAATAAAGGATTGACGTGGTTGCGACAGGAAAGGGTGGGTA ATTCCATTTTGTATGTACCTCCATTCGAAAGATGAGGGTGCGCGCTAAAC CAAAAAAATTGCTTCAGCACCTCACTTACCAACTGAAAAATCTATCATGC ATGGATTTTACGCTGTGTGTCATGTAGTCTGCGTTCCCATCTTAAATAAG TTGTATTTTCTGGGGGGGGGTAATCATAACCCGAAAGCGGGTCCCAGAGA AGATCCTTTTTGAGGTGTCAGTTAGCGGCCTCGTAAGGGGTAGATAGCCA CTGGTTTCGTTTGTGTAGTACGATAGCCGTTGTAAAGAGGGTTGCCCAAT GGACAATGACTCCGAATGAACCAAGTGTCGCGCTTCTCGTACTGATCCAT ACTAGTATTTTTTTTTTTTTTTGTAAGTTGTACCTTCTCGAATCGAAACC AAACCAAATCAAATCACATTTCATTTCAGTCGACGAAAACAAATAGACCA AACGACAAAAAAATATGTATATATTTGTTACTGTTTGTGTCTCAGGTAGT GCGCGGTGGTGAGATCCTGGAGATGTCCACGAGAAACCTTCTCGTCGGAG ACGTGGTTCTCTTGGAAGCCGGGGACAAGATTCCCGCGGACGGGGTGTTG ACGCAGGGTGATGACGTGACCGTCAATGAATCTTCGCTCACAGGGGAGGC GGAGGACGTGCGTAAGGAGAGCGAGGATGGCGGGGGGATGGTGGAGCGTG ACGCGTTTATGCTGTCGGGCTGCACGTTGACGAGCGGGCGGGCCACCATG ATGGTCATCGCCGTGGGAGCGGAGAGTCGGTGGGGAAGAATCAAGGTGTG TTGTGGGGTGTGAAAACTTGTTCTTTTGTTTTCGTAGTCGTTGCCTATGA TATTTTGTGTGGAGTATTTTTCTGTTATTGTGTTTGGTTCCAAGTGCATA GCAGAGTGTCTGCGTGCCCAAAGGCATTTTTTTTCCTAATATTGATTGGG TTGTGGATAATTAACAGTCTATCTACACCAAAGTTTCGTTATTAAGTATT TATTCGTATCTCTCACGGGAGTAGTGAGCAAGCCCAGCCAAAAGGGTCGG AAGGGTCATGAGTTCTGAAGCGGTAGGCATAGATATGCAGGTTACTCCGA CTTCGCATCAATATCGCCAATAATATCCAAAATTAGACAAAAAGCGGTGC CCACCTTGATCGCTGAGCACACTGAATGGCAGTCGTAACGTAATGGCCCA TGTGTTTTAATGGGACTTCGTTCGTACTTCCGCTTTTTTGTCATAACTTG CTTGGTATTGACCCTGTGATTATCAAAAACCCATAGATATTTACCTTCTC TGTCATACTCCATCGGTAACAAGCCTTACTTTTTGTCATAGTCGATTGAT TAGGTATCAACGCTGTGGACGCCGGTCATCTGCACGTGAAATTTCATCCT CATGTGAAGAAGTGACGTCTCTAACCTGACGACCGTAATGGGAAAAAAAT AGCTGTATAGTTATAGAGTATAGAAGGAGAATTAGATGGCTTGTGGTTTT GCGCACAATGTCTGCAGTGCTCAGCATTCATCGTTGTCATTTTTAGTTGA GGAAAATTTTGTCCATCCGCCCGAAGATTCACCAATGAAAATTGTCCCGC AACAAGCATCGCCTTGCCGTAAAGGTGGGATAATCGAGAACACCTGCTGC ATGATATATATATATATATATATATATATATATATATATATTTATTTATT TTTCCCCCGGAAGGCTAAGGCAAAAACCTTTACTGATGCTTCCATACCGA AGTAAGTCTACATTTCCTTTTACAGAACAGAGTTATTCGTTCCTCTGCGG GGTAGGCGCCATCCCGGTTCGGCTGAACCATGTGGGCAGTGTGGGGGTTG CACCCACTAAAAGACCTCTGACTAGACTTCCAGTCATGCTCAGTTCACGA GCTACCCTACCCGTTCACGTGTAGGTCCGTCATTGCTGCATGATATGTAT ACCGTGAAAGCCCGTATTATCCCCGCGTTGTATGTAACACCTGCTTGTTC GCTGGATGTTGAAATCCGTCCGAGTTGGGTATTTATTTTCGTGGATGGAT CGTGACATCAATTGGAGTGTACAGCAGGTGATTATATTACGTTGTGTCAG GTATTGCGCCGTCTATCTGATGACACATACCAACAAGCTACTTGTAGTTT CAGCGACATATTCGGCAATTTTGGGCGTTTCGGGTGTCTTCACGATGGAG TGTCGGAAAAAAGAAGACGTTTAAAAATATAGTATCGCTCGAATGATGTA CTTACATTCATATATATATTCCCTGGATGATGCCCTAACTGATGTAGCGT CCTGGCAGCGGGCAGTCCTCCTGTTACATAATACTGTGCCATCAGCTTAT TTTCGTCCCTTTCTGGGGACTAAAGACACTCGTTTTTCGTTCGAGCCGCG GGCCGTTTTTTTGTTTGGGTATTTAGCTCTTTATTTATTACTGGTGGCCA GAGATGTTTCCGATGCCCGTAGAGTTCGTGTAGTGTTCTCCTATTCATGT AGTCTTTTTCCAAACACATGGGAAGACGTCCGTGAAGATTCGTTTCAGGC CTTGATTGTGATGACCTGCTCATGAATATGAATAAACTAGAGATGGGCTT TTCGTCTTGTTTTTTGAAGGCGAAGCTTCAAGAGGAGCCCAGCGATACCC CTCTTCAGGAGAAGCTAGACACCATGGCGGCAAACATTGGCTACGTTGGA ATGGCGTGTGCGGCAGCCACCTTCGTTGCCACTTTGTGCGTTTACTTCAC CACCCACAGGGTGAGCTGTCTTGTCTGTTTCGGGAGGCTTTGTGTGTCAC AATTACCTGTCACAGTGGTTTGTTTTGATTCCAACAGCAATGCTCAATAT TTATACCTGCCGTACCTGGGGCGAGGGTAAGACTACGGCTAATGCTGGGA CTAACTGGCAAATATCGATTTCGCTTTCTCGAGATGCTCAAGTACTGTCT TGTGCTACATGTTATGATTACGCCTTCAAAATATAGGAGCTGGACAGCGC ACATCTGGGAGAGCACGTGGACACGGTGTTCGAGCACATCCTGCATGCTT TCGTGCTCAGCGTGACGATCGTGGTGGTGGCCGTACCCGAGGGGTTGCCC CTCGCGGTCACTATCTCCTTGGCGTATTCCACATCCAAGATGCTCAAAGA CAACAATCTTATTCGTGTACTGGCGGTGAGTGAGTACGTAAGTGAGTATC ATCTATGCTATATATATAGATATATAGATTTGCCTATTTGATGTCACCCT ATCGCAGGAAGGCATGCCCCCCCCTCGTGTATGATAACGGTGTATTTGCC CCGTTTTTGTACAGTGAGGAGCGTGGCTGTATGTGTGTGTCTCCATTATA AACAGGTATCGGAGTTTGTTGCACCTATTAGAGCACGCATAGCATGGATT GCAGCAACCTTGACAACATGGTATCAGTGAATTGCTTGTATGTGCACTGT AGCGAAAACATGAAATGGTCTTCGTACGAAGACCAGAAAGATTGAAAACA AGCCTCCACATTGCCACCTGCAATTGTCATTGTCGGTACAAGCACCGTGC CATAAGTCGCTTGTAAGTAAGACTCTGGAAGCTCATGTAGTAACTCCCAT GTTACCCATGTTGGGGTTGTGTAGGTCATTTGAATATTCAATTTGTATAC AATTGTGAGCAAAATGAGATCAATAGGAGCACACATGAAAGATGCACTAG CTAGCTGGATCTATTTGATGTACAAAGAGG
back to top

Coding sequence (CDS) from alignment at H-paniculata_contig5084:6180..14509+

>mRNA_H-paniculata_contig5084.12370.1 ID=mRNA_H-paniculata_contig5084.12370.1|Name=mRNA_H-paniculata_contig5084.12370.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2448bp|location=Sequence derived from alignment at H-paniculata_contig5084:6180..14509+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGCTCCCAGGACCCGGCAGCATAGCTTGCGCAACTCGTTGGTGAAGGA
GCCTTCAGTCCTGACTCACGATGGGAATGCTGCGTTCGGCTTGTCCGCGA
GGCAGATCCTGGAAATGAACGAGGACGGTCTGTCGGAAGACAATATGATG
GCTCCCAGGACCCGGCAGCATAGCTTGCGCAACTCGTTGGTGAAGGAGCC
TTCAGTCCTGACTCACGATGGGAATGCTGCGTTCGGCTTGTCCGCGAGGC
AGATCCTGGAAATGAACGAGGACGGTCTGTCGGAAGACAATATGAGAGCG
CTGAGGGCAATAGGAGGGCCGCCGGCGCTGGCAGAGCTACTCGATAGCGA
TATTTCGTCTGGTTTGGCGCGAGATGATGACCTAGAACTCAGGGCGAACG
AGTTCGGCCGCAACTGGATGCCTGTCCCCGACCCCAAGACGTGGATCCAG
CTGTTCATCGACAGCTTCGACGACACGACCTTGATCATTCTTATCGTCTC
TGCGATCGTGTCTCTCGCGAGAGCGCTGAGGGCAATAGGAGGGCCGCCGG
CGCTGGCAGAGCTACTCGATAGCGATATTTCGTCTGGTTTGGCGCGAGAT
GATGACCTAGAACTCAGGGCGAACGAGTTCGGCCGCAACTGGATGCCTGT
CCCCGACCCCAAGACGTGGATCCAGCTGTTCATCGACAGCTTCGACGACA
CGACCTTGATCATTCTTATCGTCTCTGCGATCGTGTCTCTCGCGGTCGGT
TTCTACAGCGACCCTGCGAAAGGTTGGGTGGAAGGCGTGGCAATTCTGTG
CGCTGTGCTGGTGGTGGCGGTAGTGACAGCAACAAATGACTATTCAAAGG
ACAAGCAGTTCAGGGCGCTTAACGCCGTGAAGGATGACGTCACTGTACAG
GTCGGTTTCTACAGCGACCCTGCGAAAGGTTGGGTGGAAGGCGTGGCAAT
TCTGTGCGCTGTGCTGGTGGTGGCGGTAGTGACAGCAACAAATGACTATT
CAAAGGACAAGCAGTTCAGGGCGCTTAACGCCGTGAAGGATGACGTCACT
GTACAGGTAGTGCGCGGTGGTGAGATCCTGGAGATGTCCACGAGAAACCT
TCTCGTCGGAGACGTGGTTCTCTTGGAAGCCGGGGACAAGATTCCCGCGG
ACGGGGTGTTGACGCAGGGTGATGACGTGACCGTCAATGAATCTTCGCTC
ACAGGGGAGGCGGAGGACGTGCGTAAGGAGAGCGAGGATGGCGGGGGGAT
GGTGGAGCGTGACGCGTTTATGCTGTCGGGCTGCACGTTGACGAGCGGGC
GGGCCACCATGATGGTCATCGCCGTGGGAGCGGAGAGTCGGTGGGGAAGA
ATCAAGGTAGTGCGCGGTGGTGAGATCCTGGAGATGTCCACGAGAAACCT
TCTCGTCGGAGACGTGGTTCTCTTGGAAGCCGGGGACAAGATTCCCGCGG
ACGGGGTGTTGACGCAGGGTGATGACGTGACCGTCAATGAATCTTCGCTC
ACAGGGGAGGCGGAGGACGTGCGTAAGGAGAGCGAGGATGGCGGGGGGAT
GGTGGAGCGTGACGCGTTTATGCTGTCGGGCTGCACGTTGACGAGCGGGC
GGGCCACCATGATGGTCATCGCCGTGGGAGCGGAGAGTCGGTGGGGAAGA
ATCAAGGCGAAGCTTCAAGAGGAGCCCAGCGATACCCCTCTTCAGGAGAA
GCTAGACACCATGGCGGCAAACATTGGCTACGTTGGAATGGCGTGTGCGG
CAGCCACCTTCGTTGCCACTTTGTGCGTTTACTTCACCACCCACAGGGCG
AAGCTTCAAGAGGAGCCCAGCGATACCCCTCTTCAGGAGAAGCTAGACAC
CATGGCGGCAAACATTGGCTACGTTGGAATGGCGTGTGCGGCAGCCACCT
TCGTTGCCACTTTGTGCGTTTACTTCACCACCCACAGGGAGCTGGACAGC
GCACATCTGGGAGAGCACGTGGACACGGTGTTCGAGCACATCCTGCATGC
TTTCGTGCTCAGCGTGACGATCGTGGTGGTGGCCGTACCCGAGGGGTTGC
CCCTCGCGGTCACTATCTCCTTGGCGTATTCCACATCCAAGATGCTCAAA
GACAACAATCTTATTCGTGTACTGGCGGTGAGTGAGTACGTAAGTGAGTA
TCATCTATGCTATATATATAGATATATAGATTTGCCTATTTGAGAGCTGG
ACAGCGCACATCTGGGAGAGCACGTGGACACGGTGTTCGAGCACATCCTG
CATGCTTTCGTGCTCAGCGTGACGATCGTGGTGGTGGCCGTACCCGAGGG
GTTGCCCCTCGCGGTCACTATCTCCTTGGCGTATTCCACATCCAAGATGC
TCAAAGACAACAATCTTATTCGTGTACTGGCGGTGAGTGAGTACGTAAGT
GAGTATCATCTATGCTATATATATAGATATATAGATTTGCCTATTTGA
back to top