prot_H-paniculata_contig508.12363.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig508.12363.1
Unique Nameprot_H-paniculata_contig508.12363.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length534
Homology
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BLAST of mRNA_H-paniculata_contig508.12363.1 vs. uniprot
Match: D7G4L4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4L4_ECTSI)

HSP 1 Score: 80.5 bits (197), Expect = 2.220e-12
Identity = 34/46 (73.91%), Postives = 41/46 (89.13%), Query Frame = 0 
Query:   23 KRRTRHSAQCQHPGCTTARTFGCEGDKNASFCAVHKQDGMVNIKGR 68
            KRR R SA+CQ+PGC TARTFG +GD+ ASFCAVHK++GM+NIKGR
Sbjct:  395 KRRARASARCQYPGCMTARTFGRQGDRQASFCAVHKEEGMINIKGR 440
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig508.12363.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G4L4_ECTSI2.220e-1273.91Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig508contigH-paniculata_contig508:10969..28739 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig508.12363.1mRNA_H-paniculata_contig508.12363.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig508 10801..29092 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig508.12363.1 ID=prot_H-paniculata_contig508.12363.1|Name=mRNA_H-paniculata_contig508.12363.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=534bp
MIGGGGDNSIAEEVVGNSDSDAKRRTRHSAQCQHPGCTTARTFGCEGDKN
ASFCAVHKQDGMVNIKGRRCNVPNCQHRPGFAMPGEKRGKYCATHRQPGM
IDVVSRKCQGEGVTCERQPVYGWPGERATRCGTHKLERTLTNMTTGATRV
ERMYDVRGKRCQAPGCTRQPGFGDPLRDKGSVRCNEHKLEGMTNVRKRRA
LERAGKQHLMQVPPQPQQPQHTQHQQQPHHQQHQQQQQQHGMSSMDYHQE
LSMTPHDSAELQHSQTQGNVLETPTHTGEHTTYAATAAAVSAYAPAPRLQ
SLICSTLSPTPSGGGSGYLPLSSTLEGITSALIDTPAAAAAVSAATAGVG
VVSTAHRDLGDSSDQTAGMPGHHEPHQPQHSTISTAEHHQHQHPQDAVVL
SQHAGHYAMGQSAQQQHHQPTSQHIPPMVHHATPTTPHQLDTPGAATATP
LGHAHPATEHYYGEVAANAADLAGVPPLRLNDVSSHGGEEAVARVENAHI
VHGHGGHTGGVIRSDDAATLAVLAQAAHSTSIA*
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