mRNA_H-paniculata_contig508.12363.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig508.12363.1 vs. uniprot
Match: D7G4L4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4L4_ECTSI) HSP 1 Score: 80.9 bits (198), Expect = 2.920e-12 Identity = 34/54 (62.96%), Postives = 43/54 (79.63%), Query Frame = 1
Query: 211 VGNSDSDAKRRTRHSAQCQHPGCTTARTFGCEGDKNASFCAVHKQDGMVNIKGR 372
+ + KRR R SA+CQ+PGC TARTFG +GD+ ASFCAVHK++GM+NIKGR
Sbjct: 387 ISQAAGSNKRRARASARCQYPGCMTARTFGRQGDRQASFCAVHKEEGMINIKGR 440 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig508.12363.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig508.12363.1 >prot_H-paniculata_contig508.12363.1 ID=prot_H-paniculata_contig508.12363.1|Name=mRNA_H-paniculata_contig508.12363.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=534bp MIGGGGDNSIAEEVVGNSDSDAKRRTRHSAQCQHPGCTTARTFGCEGDKNback to top mRNA from alignment at H-paniculata_contig508:10801..29092+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig508.12363.1 ID=mRNA_H-paniculata_contig508.12363.1|Name=mRNA_H-paniculata_contig508.12363.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=18292bp|location=Sequence derived from alignment at H-paniculata_contig508:10801..29092+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig508:10801..29092+ >mRNA_H-paniculata_contig508.12363.1 ID=mRNA_H-paniculata_contig508.12363.1|Name=mRNA_H-paniculata_contig508.12363.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3204bp|location=Sequence derived from alignment at H-paniculata_contig508:10801..29092+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |