prot_H-paniculata_contig50774.12360.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig50774.12360.1
Unique Nameprot_H-paniculata_contig50774.12360.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length207
Homology
BLAST of mRNA_H-paniculata_contig50774.12360.1 vs. uniprot
Match: A0A6D2JBX5_9BRAS (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2JBX5_9BRAS)

HSP 1 Score: 174 bits (441), Expect = 1.390e-49
Identity = 88/200 (44.00%), Postives = 128/200 (64.00%), Query Frame = 0
Query:    2 TGTRPDIAYAVHQATRRMEDPCQEDFSTCKRIYRYLSTVPDLGITFGGKSNGHGLEGFVDADWAEDVEDRKSTTRYVLKLNGGAIRWCSRKQQLLTWSSTEVEYVAAGEAGKETVYLRELLGSIGFGCRESTTLFEDNKAAINLNKGSGAHCRTKHIGVRWHGIREWIREGILALKYVQTGDQLAGILTKGLSGVKFQRL 201
            T TRPD+ Y+V+  +R ME+P ++     KRI RY+      GI +  +  G  L GFVD+D+A DV+DRKST+ YV  L GGA+ W S+KQ ++T S+TE E+VAA     + ++LR +LG IG+   E TTLF DN + I L+K    H R+KHI VR++ +R+ + E ++ LK+  T DQL+ I+TK +    F+RL
Sbjct:  167 TATRPDLIYSVNLVSRYMENPNEQHLLAAKRILRYVQGTCGFGIRYK-QGEGEKLVGFVDSDYAGDVDDRKSTSGYVFMLGGGAVSWASKKQPIVTLSTTEAEFVAAAYGACQAMWLRNILGEIGWAQEEGTTLFCDNSSTIKLSKNPVLHGRSKHIHVRYYFLRDLVNEEVILLKFCGTEDQLSDIMTKAVKLEVFERL 365          
BLAST of mRNA_H-paniculata_contig50774.12360.1 vs. uniprot
Match: UPI000901F676 (uncharacterized protein LOC109128812 n=1 Tax=Camelina sativa TaxID=90675 RepID=UPI000901F676)

HSP 1 Score: 172 bits (436), Expect = 2.130e-49
Identity = 87/204 (42.65%), Postives = 128/204 (62.75%), Query Frame = 0
Query:    2 TGTRPDIAYAVHQATRRMEDPCQEDFSTCKRIYRYLSTVPDLGITF--GGKSNGHGLEGFVDADWAEDVEDRKSTTRYVLKLNGGAIRWCSRKQQLLTWSSTEVEYVAAGEAGKETVYLRELLGSIGFGCRESTTLFEDNKAAINLNKGSGAHCRTKHIGVRWHGIREWIREGILALKYVQTGDQLAGILTKGLSGVKFQRLIN 203
            T TRPD+ Y+V+  +R ME P ++  +T KRI RY+    D GI +  GG+     L G+VD+D+A DV+D KST  YV  L GGA+ W S+KQ ++T S+TE E+V+        V+LR ++  IG   +E TT+F DN +AI L+K    H R+KHI VR+H +RE + +G++ L Y  T DQ++ I+TK +    F++L N
Sbjct:  115 TATRPDLIYSVNLVSRYMERPNEQHMATAKRILRYVQGTRDFGIQYKYGGEQK---LVGYVDSDYAGDVDDFKSTFEYVFMLGGGAVSWVSKKQPIVTLSTTEAEFVSVAYGACHAVWLRNIMAEIGSEQKEGTTMFCDNSSAIKLSKNPVLHGRSKHIHVRFHYLRELVNDGVIQLDYCSTHDQISDIMTKAVKLEAFEKLKN 315          
BLAST of mRNA_H-paniculata_contig50774.12360.1 vs. uniprot
Match: A0A090C2V0_HYAAE (RxLR effector candidate protein (Fragment) n=3 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=A0A090C2V0_HYAAE)

HSP 1 Score: 171 bits (432), Expect = 3.170e-49
Identity = 86/199 (43.22%), Postives = 123/199 (61.81%), Query Frame = 0
Query:    4 TRPDIAYAVHQATRRMEDPCQEDFSTCKRIYRYLSTVPDLGITFGGKSNGHGLEGFVDADWAEDVEDRKSTTRYVLKLNGGAIRWCSRKQQLLTWSSTEVEYVAAGEAGKETVYLRELLGSIG-FGCRESTTLFEDNKAAINLNKGSGAHCRTKHIGVRWHGIREWIREGILALKYVQTGDQLAGILTKGLSGVKFQRL 201
            TRPD+A AV   ++   DPC   +   KR+ RYL   P+ G+ F  +  G  + G+ DADWA D+E R+ST+ YV  +NGG I W S+KQ+ +  SSTE EY+A  EA KE V+L+  LG +G     E+  +FEDN+ +I L K    H RTKHI +R+H +RE +  G + L+Y  T D LA ++TK ++ V+F+ L
Sbjct:   51 TRPDLAAAVGSLSQFSSDPCPTHWQALKRVLRYLQATPNHGLEFT-REEGSRICGYTDADWAGDIESRRSTSGYVFMMNGGCISWKSQKQRTVALSSTEAEYMALSEATKEAVWLKVFLGELGEMTSDEAIKMFEDNQGSIALAKNPEFHKRTKHIDIRYHFVREKVESGEVILEYCSTQDMLADMMTKPIAAVQFESL 248          
BLAST of mRNA_H-paniculata_contig50774.12360.1 vs. uniprot
Match: UPI001AE8F203 (secreted RxLR effector protein 161-like n=1 Tax=Lepeophtheirus salmonis TaxID=72036 RepID=UPI001AE8F203)

HSP 1 Score: 167 bits (424), Expect = 2.390e-48
Identity = 88/204 (43.14%), Postives = 124/204 (60.78%), Query Frame = 0
Query:    1 STGTRPDIAYAVHQATRRMEDPCQEDFSTCKRIYRYLSTVPDLGITFGGKSNGHGLEGFVDADWAEDVEDRKSTTRYVLKLNGGAIRWCSRKQQLLTWSSTEVEYVAAGEAGKETVYLRELLGSIGFGCRESTTLFEDNKAAINLNKGSGAHCRTKHIGVRWHGIREWIREGILALKYVQTGDQLAGILTKGLSGVKFQRLINL 204
            ST TRPD+A+AV +  R  + P  E +   K I RYL    +LG+ +  KSN   L GF D+DWA D +DRKST+ Y+   N G I W S+KQ+ +  S+ + EY+A   A +E +++R LL +I   C   T +FEDN++ I+L K    H R KHI +R+H  RE +    + L Y Q+ D +A +LTKGLS VKF +L+NL
Sbjct:   48 STRTRPDLAFAVGELARYCDAPGSEHWVALKIILRYLKNTKNLGLCYR-KSNKGELVGFSDSDWAGDHDDRKSTSGYIFLYNEGPISWKSQKQRSVALSTVKAEYMALSAASQECIWIRNLLCNIERSCDSPTVIFEDNQSTISLTKNPQYHGRAKHIDIRYHFTRELVEANKITLVYCQSEDMVADMLTKGLSKVKFVKLLNL 250          
BLAST of mRNA_H-paniculata_contig50774.12360.1 vs. uniprot
Match: UPI0006A737CF (uncharacterized mitochondrial protein AtMg00810-like n=1 Tax=Brassica oleracea var. oleracea TaxID=109376 RepID=UPI0006A737CF)

HSP 1 Score: 169 bits (429), Expect = 3.930e-48
Identity = 87/202 (43.07%), Postives = 126/202 (62.38%), Query Frame = 0
Query:    2 TGTRPDIAYAVHQATRRMEDPCQEDFSTCKRIYRYLSTVPDLGITF--GGKSNGHGLEGFVDADWAEDVEDRKSTTRYVLKLNGGAIRWCSRKQQLLTWSSTEVEYVAAGEAGKETVYLRELLGSIGFGCRESTTLFEDNKAAINLNKGSGAHCRTKHIGVRWHGIREWIREGILALKYVQTGDQLAGILTKGLSGVKFQRL 201
            T TRPD+ Y+V+  +R ME+P +E     K I RY+      GI +  GG+     L G+VD+D+A D +DRKST+ +     GGA+ W S+KQ ++T S+TE EYVAA     + V++R +L  IGFG  + T LF DN +AI L+K    H R+KHI VR+H +RE + EGI++ +Y  T +QLA I+TK +    F++L
Sbjct:  135 TATRPDLIYSVNVVSRYMENPREEHMMAVKHIMRYVKGTAGFGIQYLCGGEEK---LVGYVDSDYAGDEDDRKSTSGFTFMFGGGAVSWSSKKQPIVTLSTTEAEYVAAANGACQAVWMRNMLTEIGFGQGDGTVLFCDNSSAIKLSKNLVLHGRSKHIHVRFHFLRELVNEGIISTEYCSTHEQLADIMTKPVKLEVFEKL 333          
BLAST of mRNA_H-paniculata_contig50774.12360.1 vs. uniprot
Match: H3G656_PHYRM (Uncharacterized protein n=3 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G656_PHYRM)

HSP 1 Score: 165 bits (417), Expect = 9.870e-48
Identity = 82/199 (41.21%), Postives = 123/199 (61.81%), Query Frame = 0
Query:    4 TRPDIAYAVHQATRRMEDPCQEDFSTCKRIYRYLSTVPDLGITFGGKSNGHGLEGFVDADWAEDVEDRKSTTRYVLKLNGGAIRWCSRKQQLLTWSSTEVEYVAAGEAGKETVYLRELLGSIG-FGCRESTTLFEDNKAAINLNKGSGAHCRTKHIGVRWHGIREWIREGILALKYVQTGDQLAGILTKGLSGVKFQRL 201
            TRPD+A AV   ++   DPC   +   KR+ RYL   P  G+ F  + +  G+ G+ DADWA D+E R+ST+ Y   +NGG I W S+KQ+ +  SSTE EY+A  EA +E V+L+  L  +G     E+  +++DN+ +I L K    H RTKHI +R+H +RE + +G + L+Y+ T D LA I+TK ++ V+F+ L
Sbjct:   21 TRPDLAAAVGVLSQFSADPCPTHWQALKRVLRYLQATPTHGLEFS-REDSLGMCGYSDADWAGDIESRRSTSGYAFMMNGGCISWRSKKQRTVALSSTEAEYMALSEATQEAVWLKVFLCELGEMASDEAVKIYKDNQGSIALAKNPQFHKRTKHIDIRYHFVREKVEDGQVVLQYISTTDMLADIMTKAITAVQFRVL 218          
BLAST of mRNA_H-paniculata_contig50774.12360.1 vs. uniprot
Match: UPI00193C8901 (secreted RxLR effector protein 161-like n=1 Tax=Solenopsis invicta TaxID=13686 RepID=UPI00193C8901)

HSP 1 Score: 163 bits (413), Expect = 3.730e-47
Identity = 85/205 (41.46%), Postives = 124/205 (60.49%), Query Frame = 0
Query:    1 STGTRPDIAYAVHQATRRMEDPCQEDFSTCKRIYRYLSTVPDLGITFGGKSNGHGLEGFVDADWAEDVEDRKSTTRYVLKLNGGAIRWCSRKQQLLTWSSTEVEYVAAGEAGKETVYLRELLGSIGFGCRESTTLFEDNKAAINLNKGSGAHCRTKHIGVRWHGIREWIREGILALKYVQTGDQLAGILTKGLSGVKFQRLINLL 205
            +T TRPDIA+AV + +  + +     ++  KRI RYL    D G+ +    +   +EG+VDAD+AED+E R+STT YV  L  GA+ W +++Q+++T S+TE EYVAA  A KE ++LR LL  +   C  +T +F DN++ + L + S  H RTKHI VR H IRE +  G +  K V T  Q A + TK L   +F+ L  L+
Sbjct:    4 ATVTRPDIAFAVGKVSAFLNNHDVNHWNAVKRIIRYLLNTVDRGVLYESGGSNEEIEGYVDADFAEDLETRRSTTGYVFLLGNGAVTWTAQRQKMVTISTTEAEYVAAAAAAKEAIWLRRLLSGLERNCNRATKVFIDNQSTLRLVQNSEFHKRTKHIDVRCHFIREKVLSGKIDTKCVNTTKQKADLFTKALPRDRFKALCQLI 208          
BLAST of mRNA_H-paniculata_contig50774.12360.1 vs. uniprot
Match: UPI001372DC10 (Ty1/Copia family RNAse HI domain-containing protein n=3 Tax=Bacteria TaxID=2 RepID=UPI001372DC10)

HSP 1 Score: 166 bits (421), Expect = 3.930e-47
Identity = 84/200 (42.00%), Postives = 122/200 (61.00%), Query Frame = 0
Query:    3 GTRPDIAYAVHQATRRMEDPCQEDFSTCKRIYRYLSTVPDLGITFGGKSNGHGLEGFVDADWAEDVEDRKSTTRYVLKLNGGAIRWCSRKQQLLTWSSTEVEYVAAGEAGKETVYLRELLGSIG-FGCRESTTLFEDNKAAINLNKGSGAHCRTKHIGVRWHGIREWIREGILALKYVQTGDQLAGILTKGLSGVKFQRL 201
            GTRPD+A AV   ++   DPC   +   KR++RY+      G+ F   S   GL+G+ DADWA D+E R+ST+ Y   +NGG I W S+KQ+ +  SSTE EY+A  EA +E V+L+  L  +G     E+  ++EDN+ +I L K    H RTKHI +R+H +RE + +G + L+YV T D LA I+TK ++  +F  L
Sbjct:   99 GTRPDLAAAVGVLSQFAADPCPTHWQALKRVFRYIRGTKTHGLVFQASSE-DGLQGYSDADWAGDIESRRSTSGYAFMMNGGCISWRSKKQRTVALSSTEAEYMALSEATQEAVWLKVFLCELGEMASDEAVKIYEDNQGSIALAKNPEFHKRTKHIDIRYHFVREKVEDGQVVLQYVSTLDMLADIMTKPIAAPQFDAL 297          
BLAST of mRNA_H-paniculata_contig50774.12360.1 vs. uniprot
Match: A0A1J3D358_NOCCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Noccaea caerulescens TaxID=107243 RepID=A0A1J3D358_NOCCA)

HSP 1 Score: 170 bits (430), Expect = 6.440e-47
Identity = 87/201 (43.28%), Postives = 126/201 (62.69%), Query Frame = 0
Query:    2 TGTRPDIAYAVHQATRRMEDPCQEDFSTCKRIYRYLSTVPDLGITFGGKSNGH-GLEGFVDADWAEDVEDRKSTTRYVLKLNGGAIRWCSRKQQLLTWSSTEVEYVAAGEAGKETVYLRELLGSIGFGCRESTTLFEDNKAAINLNKGSGAHCRTKHIGVRWHGIREWIREGILALKYVQTGDQLAGILTKGLSGVKFQRL 201
            T TRPD+ + V   +R M +P +   +T KRI RYL    D GI +  +  G   L G+ D+D+A D++D KST+ YV  L+GGA+ W SRKQ ++T SSTE EYVAA     + ++++ +LG IGF   +  TLF DN + I L+K +  H ++KHI VR+H +RE  +EG++ L +  T +QLA I+TK L    FQR+
Sbjct:  281 TATRPDLMFVVCLISRFMANPTELHLATAKRIMRYLKGTLDFGIWYRRERKGSLSLLGYTDSDYAGDIDDCKSTSGYVFLLSGGAVAWSSRKQPIVTLSSTEAEYVAAATCACQAIWMKRVLGEIGFEQEDGMTLFCDNTSTIKLSKNAVMHGKSKHIRVRYHFLRELSKEGLVTLVHCNTEEQLADIMTKPLKMASFQRI 481          
BLAST of mRNA_H-paniculata_contig50774.12360.1 vs. uniprot
Match: A0A7D9D5L2_PARCT (Uncharacterized protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9D5L2_PARCT)

HSP 1 Score: 165 bits (418), Expect = 6.960e-47
Identity = 83/205 (40.49%), Postives = 123/205 (60.00%), Query Frame = 0
Query:    1 STGTRPDIAYAVHQATRRMEDPCQEDFSTCKRIYRYLSTVPDLGITFGGKSNGHGLEGFVDADWAEDVEDRKSTTRYVLKLNGGAIRWCSRKQQLLTWSSTEVEYVAAGEAGKETVYLRELLGSIGFGCRESTTLFEDNKAAINLNKGSGAHCRTKHIGVRWHGIREWIREGILALKYVQTGDQLAGILTKGLSGVKFQRLINLL 205
            +T TRPD+A AV   ++ M  P +E +   KR+ RY+    + G+ F GKS    L G+ DADWA D++ R+ST+ YV ++NG  + WCS++Q  +T S+TE EYVA   A +E V+LR LL  IG    + + + EDN+ AI L+K    H RTKHI V +H +RE + +  + + Y  T   LA ++TK L    FQ+  ++L
Sbjct:   97 TTATRPDLASAVGILSKFMSKPSKEHWHGAKRVLRYIKDTVNYGLVFEGKSTKCSLIGYSDADWANDLDTRRSTSGYVFQINGSTVSWCSKRQPCVTRSTTEAEYVALSHATQEIVWLRRLLNDIGEKQDQPSIMNEDNQGAIELSKNPRFHNRTKHIDVAYHFVREKVGDKSINVNYCSTDKMLADVMTKSLPRQTFQKFRDML 301          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig50774.12360.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6D2JBX5_9BRAS1.390e-4944.00Reverse transcriptase Ty1/copia-type domain-contai... [more]
UPI000901F6762.130e-4942.65uncharacterized protein LOC109128812 n=1 Tax=Camel... [more]
A0A090C2V0_HYAAE3.170e-4943.22RxLR effector candidate protein (Fragment) n=3 Tax... [more]
UPI001AE8F2032.390e-4843.14secreted RxLR effector protein 161-like n=1 Tax=Le... [more]
UPI0006A737CF3.930e-4843.07uncharacterized mitochondrial protein AtMg00810-li... [more]
H3G656_PHYRM9.870e-4841.21Uncharacterized protein n=3 Tax=Phytophthora ramor... [more]
UPI00193C89013.730e-4741.46secreted RxLR effector protein 161-like n=1 Tax=So... [more]
UPI001372DC103.930e-4742.00Ty1/Copia family RNAse HI domain-containing protei... [more]
A0A1J3D358_NOCCA6.440e-4743.28Retrovirus-related Pol polyprotein from transposon... [more]
A0A7D9D5L2_PARCT6.960e-4740.49Uncharacterized protein n=1 Tax=Paramuricea clavat... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 3..197
NoneNo IPR availablePANTHERPTHR11439:SF275coord: 3..197

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig50774contigH-paniculata_contig50774:4..624 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig50774.12360.1mRNA_H-paniculata_contig50774.12360.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig50774 4..624 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig50774.12360.1 ID=prot_H-paniculata_contig50774.12360.1|Name=mRNA_H-paniculata_contig50774.12360.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=207bp
STGTRPDIAYAVHQATRRMEDPCQEDFSTCKRIYRYLSTVPDLGITFGGK
SNGHGLEGFVDADWAEDVEDRKSTTRYVLKLNGGAIRWCSRKQQLLTWSS
TEVEYVAAGEAGKETVYLRELLGSIGFGCRESTTLFEDNKAAINLNKGSG
AHCRTKHIGVRWHGIREWIREGILALKYVQTGDQLAGILTKGLSGVKFQR
LINLLM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039537Retrotran_Ty1/copia-like