prot_H-paniculata_contig50705.12349.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig50705.12349.1
Unique Nameprot_H-paniculata_contig50705.12349.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length71
Homology
BLAST of mRNA_H-paniculata_contig50705.12349.1 vs. uniprot
Match: A0A1X7VXK3_AMPQE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7VXK3_AMPQE)

HSP 1 Score: 61.6 bits (148), Expect = 4.790e-10
Identity = 34/71 (47.89%), Postives = 45/71 (63.38%), Query Frame = 0
Query:    1 EPKNYRETQASPEWEHWQTAEEIEMQGLIDNGVWTQVEHPKNKLVVSTMMIYKRKISKDGKMERYKCRLVA 71
            EP    E  +S E + W+ A E EM+ L  N V+  VE PKNK V+ +  I++RKI+ DG +ERYK RLVA
Sbjct:    5 EPSTINEALSSSEADKWKEAMEREMESLKANDVYDLVELPKNKEVIGSKWIFRRKINADGSVERYKARLVA 75          
BLAST of mRNA_H-paniculata_contig50705.12349.1 vs. uniprot
Match: UPI0015A81C6A (uncharacterized mitochondrial protein AtMg00820-like n=1 Tax=Stegodyphus dumicola TaxID=202533 RepID=UPI0015A81C6A)

HSP 1 Score: 60.1 bits (144), Expect = 1.210e-9
Identity = 30/71 (42.25%), Postives = 44/71 (61.97%), Query Frame = 0
Query:    1 EPKNYRETQASPEWEHWQTAEEIEMQGLIDNGVWTQVEHPKNKLVVSTMMIYKRKISKDGKMERYKCRLVA 71
            +P+   E   SP+ E W+ A E E++ L  N  W  V  P+ + VV    ++KRK++KDG++ERYK RLVA
Sbjct:   30 DPETLEEALTSPDAEKWKLAMEEELENLKRNETWDIVPRPEGRKVVKCKWVFKRKLNKDGQVERYKARLVA 100          
BLAST of mRNA_H-paniculata_contig50705.12349.1 vs. uniprot
Match: A0A061F8M9_THECC (Cysteine-rich RLK (RECEPTOR-like protein kinase) 8 n=1 Tax=Theobroma cacao TaxID=3641 RepID=A0A061F8M9_THECC)

HSP 1 Score: 61.2 bits (147), Expect = 2.840e-9
Identity = 32/71 (45.07%), Postives = 45/71 (63.38%), Query Frame = 0
Query:    1 EPKNYRETQASPEWEHWQTAEEIEMQGLIDNGVWTQVEHPKNKLVVSTMMIYKRKISKDGKMERYKCRLVA 71
            EP +Y++  A     HW+ A +IE++ L DNG W+ V+ P N   V    +YK K++ DGK+ERYK RLVA
Sbjct:  159 EPNSYQKAVAHS---HWKEAMDIELKALEDNGTWSIVQLPSNYHAVGCKWVYKVKLNADGKVERYKARLVA 226          
BLAST of mRNA_H-paniculata_contig50705.12349.1 vs. uniprot
Match: A0A182HAC3_AEDAL (Integrase catalytic domain-containing protein n=1 Tax=Aedes albopictus TaxID=7160 RepID=A0A182HAC3_AEDAL)

HSP 1 Score: 60.8 bits (146), Expect = 3.920e-9
Identity = 30/71 (42.25%), Postives = 43/71 (60.56%), Query Frame = 0
Query:    1 EPKNYRETQASPEWEHWQTAEEIEMQGLIDNGVWTQVEHPKNKLVVSTMMIYKRKISKDGKMERYKCRLVA 71
            EP  Y E   S E E W  A   E Q LIDN  W  V+ P ++ ++ +  ++KRK++ DGK++R+K RLVA
Sbjct:  349 EPTTYEEAVGSEEKEKWIKAMSEEYQSLIDNDTWELVDPPTDRNIIGSRWVFKRKLNADGKVDRFKARLVA 419          
BLAST of mRNA_H-paniculata_contig50705.12349.1 vs. uniprot
Match: A0A2P4X8M5_9STRA (Putative Pol Polyprotein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4X8M5_9STRA)

HSP 1 Score: 60.5 bits (145), Expect = 5.190e-9
Identity = 29/71 (40.85%), Postives = 42/71 (59.15%), Query Frame = 0
Query:    1 EPKNYRETQASPEWEHWQTAEEIEMQGLIDNGVWTQVEHPKNKLVVSTMMIYKRKISKDGKMERYKCRLVA 71
            +PKNYRE    P  E W+ A   E++ L  N  W  +  P+N  ++ +  +YK KI  DG++ERY+ RLVA
Sbjct:   18 DPKNYREAMRDPRVEKWKEAMRTEIEALEHNDTWEVIVKPRNAKLLHSKWVYKLKIYADGRVERYRARLVA 88          
BLAST of mRNA_H-paniculata_contig50705.12349.1 vs. uniprot
Match: A0A0J7K690_LASNI (Retrovirus-related pol polyprotein from transposon tnt 1-94 (Fragment) n=1 Tax=Lasius niger TaxID=67767 RepID=A0A0J7K690_LASNI)

HSP 1 Score: 59.3 bits (142), Expect = 1.370e-8
Identity = 30/70 (42.86%), Postives = 41/70 (58.57%), Query Frame = 0
Query:    1 EPKNYRETQASPEWEHWQTAEEIEMQGLIDNGVWTQVEHPKNKLVVSTMMIYKRKISKDGKMERYKCRLV 70
            EP+ Y E  AS E E W+ A E E   LI N  WT+ + P  +  ++  +I+K+K   DGK+ RYK RLV
Sbjct:  564 EPQTYEEAMASNEVEQWRRAIEEEESALIKNNTWTKTKLPTGRKAITAKIIFKKKRDADGKVHRYKARLV 633          
BLAST of mRNA_H-paniculata_contig50705.12349.1 vs. uniprot
Match: UPI0015ACB7EE (BRO1 domain-containing protein BROX-like n=1 Tax=Stegodyphus dumicola TaxID=202533 RepID=UPI0015ACB7EE)

HSP 1 Score: 56.6 bits (135), Expect = 1.070e-7
Identity = 28/61 (45.90%), Postives = 40/61 (65.57%), Query Frame = 0
Query:   11 SPEWEHWQTAEEIEMQGLIDNGVWTQVEHPKNKLVVSTMMIYKRKISKDGKMERYKCRLVA 71
            SPE E W+ A E E++ L  N  W  V  P+ + V+    ++KRK++KDG++ERYK RLVA
Sbjct:  198 SPEAEKWKLAMEEELENLKQNETWDFVPRPEERNVMKCKWVFKRKLNKDGQVERYKIRLVA 258          
BLAST of mRNA_H-paniculata_contig50705.12349.1 vs. uniprot
Match: A0A821PJR1_9NEOP (Hypothetical protein n=1 Tax=Pieris macdunnoughi TaxID=345717 RepID=A0A821PJR1_9NEOP)

HSP 1 Score: 56.2 bits (134), Expect = 1.670e-7
Identity = 27/71 (38.03%), Postives = 42/71 (59.15%), Query Frame = 0
Query:    1 EPKNYRETQASPEWEHWQTAEEIEMQGLIDNGVWTQVEHPKNKLVVSTMMIYKRKISKDGKMERYKCRLVA 71
            EP++Y+E   S +  HW+ A + EM  L +NG WT  E P  +  ++   +++ K   +GK+ RYK RLVA
Sbjct:  313 EPRSYKEAMESADHVHWKAAMKEEMSSLEENGTWTLTELPPGRKTIANRWVFRIKRDAEGKICRYKARLVA 383          
BLAST of mRNA_H-paniculata_contig50705.12349.1 vs. uniprot
Match: A0A2I0VGA3_9ASPA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Dendrobium catenatum TaxID=906689 RepID=A0A2I0VGA3_9ASPA)

HSP 1 Score: 55.5 bits (132), Expect = 3.140e-7
Identity = 28/70 (40.00%), Postives = 40/70 (57.14%), Query Frame = 0
Query:    2 PKNYRETQASPEWEHWQTAEEIEMQGLIDNGVWTQVEHPKNKLVVSTMMIYKRKISKDGKMERYKCRLVA 71
            P+ Y++   + +  HWQ A   E Q L   G W  V HP NK ++     YK+K+  +GK++RYK RLVA
Sbjct:  858 PRTYKQ---AAQIHHWQKAMLDEFQALTKQGTWILVPHPPNKPILGCKWTYKKKVLPNGKLDRYKARLVA 924          
BLAST of mRNA_H-paniculata_contig50705.12349.1 vs. uniprot
Match: A0A2N5SCW9_9BASI (Integrase catalytic domain-containing protein n=2 Tax=Puccinia coronata f. sp. avenae TaxID=200324 RepID=A0A2N5SCW9_9BASI)

HSP 1 Score: 55.1 bits (131), Expect = 4.310e-7
Identity = 24/70 (34.29%), Postives = 42/70 (60.00%), Query Frame = 0
Query:    2 PKNYRETQASPEWEHWQTAEEIEMQGLIDNGVWTQVEHPKNKLVVSTMMIYKRKISKDGKMERYKCRLVA 71
            PK YR   +SPE   W +A ++E+  ++  GVWT V  P N  ++ T+ ++++K   +G + ++K RL A
Sbjct:  856 PKTYRSAMSSPEAAEWSSAIKLELDAMVQLGVWTVVPIPSNHHLLGTIWVFRKKYDANGNLMKFKARLCA 925          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig50705.12349.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1X7VXK3_AMPQE4.790e-1047.89Reverse transcriptase Ty1/copia-type domain-contai... [more]
UPI0015A81C6A1.210e-942.25uncharacterized mitochondrial protein AtMg00820-li... [more]
A0A061F8M9_THECC2.840e-945.07Cysteine-rich RLK (RECEPTOR-like protein kinase) 8... [more]
A0A182HAC3_AEDAL3.920e-942.25Integrase catalytic domain-containing protein n=1 ... [more]
A0A2P4X8M5_9STRA5.190e-940.85Putative Pol Polyprotein n=1 Tax=Phytophthora palm... [more]
A0A0J7K690_LASNI1.370e-842.86Retrovirus-related pol polyprotein from transposon... [more]
UPI0015ACB7EE1.070e-745.90BRO1 domain-containing protein BROX-like n=1 Tax=S... [more]
A0A821PJR1_9NEOP1.670e-738.03Hypothetical protein n=1 Tax=Pieris macdunnoughi T... [more]
A0A2I0VGA3_9ASPA3.140e-740.00Retrovirus-related Pol polyprotein from transposon... [more]
A0A2N5SCW9_9BASI4.310e-734.29Integrase catalytic domain-containing protein n=2 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig50705contigH-paniculata_contig50705:233..445 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig50705.12349.1mRNA_H-paniculata_contig50705.12349.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig50705 233..445 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig50705.12349.1 ID=prot_H-paniculata_contig50705.12349.1|Name=mRNA_H-paniculata_contig50705.12349.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=71bp
EPKNYRETQASPEWEHWQTAEEIEMQGLIDNGVWTQVEHPKNKLVVSTMM
IYKRKISKDGKMERYKCRLVA
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