prot_H-paniculata_contig507.12347.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig507.12347.1
Unique Nameprot_H-paniculata_contig507.12347.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length1054
Homology
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BLAST of mRNA_H-paniculata_contig507.12347.1 vs. uniprot
Match: A0A6H5JJJ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJJ8_9PHAE)

HSP 1 Score: 62.0 bits (149), Expect = 7.430e-6
Identity = 116/385 (30.13%), Postives = 152/385 (39.48%), Query Frame = 0 
Query:   34 KFSSVNDEDGFEVKKNPM-ANRSVTPSRKGALIRSSSPDMGA---STPSAHVQKIPLSASSLSETGS----QFACSNPMHKESSSRTVSAKSNDEDLAQHYEGYDDTSSAMSSELPSNKTNNPLFEE------GTYSPRSKVAASTAR----------------------------------------ENTSAMITGGDSTVFGSSSS------------LNPFFSD-----GGX----GSSLGGAGEGR-------------------LSPVVEVNSSTTGSAPSTLNPSQHQQQHDSVASSRALSLAP---------PSSAGYNSETDD----------DDAQSVFRATSPGAVSRPLLPLMASNSPLSCATSLNNSRSNSFA 305
            + S++ +E G  V K+ M A+ S+ PS   +LIRS+S + GA   S+ S   + +  + S  SET S    +F  +NPMHK     +   +  D DLAQHYEG     S +SSELP +KT+NPLF        G  SP S   A+                                           ++  A ++   ST   SS S             + F SD     GG     GS L G    R                   LSPV E   S   S   T N S       +V  +RA +  P         P   G  S   D            A+SVFR  SPG+VSRPL PL+A  SP+SC +    S+SNSFA
Sbjct:  313 RLSTIEEEQGLRVGKSEMTASHSMGPSPHHSLIRSTSQEAGAVTRSSSSGRPKIVHRTHSIGSETNSAVSEKFVYTNPMHKHEKKLSPPNEYGD-DLAQHYEGELGDMSDISSELPHDKTDNPLFSSDSNRDGGGSSPTSVAEAARXXXXXXXXXXXXXXXXXXXXXXXXXXCXXXXHLAESGAIVEVDSHGASMSDAASTSLASSQSNTSESPLIDQAYSSSFDSDVDQRGGGEVAAEGSPLVGGRNSRGSGGVLSIASETSSRMPFGLSPVAERTDSRGESPGLTTNSSSTTGGVSTVYLARAGADGPRGVPWSYGGPDGRGSYSMASDAAXXXXXXXXXXAESVFRPPSPGSVSRPLQPLLAQQSPMSCVSGFT-SKSNSFA 695
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig507.12347.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JJJ8_9PHAE7.430e-630.13Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..14
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 15..1053
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 10..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig507contigH-paniculata_contig507:2496..10265 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig507.12347.1mRNA_H-paniculata_contig507.12347.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig507 2427..10869 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig507.12347.1 ID=prot_H-paniculata_contig507.12347.1|Name=mRNA_H-paniculata_contig507.12347.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=1054bp
MLMLCCCLFWVIKAREDKKHRTERLLIPNRRMAKFSSVNDEDGFEVKKNP
MANRSVTPSRKGALIRSSSPDMGASTPSAHVQKIPLSASSLSETGSQFAC
SNPMHKESSSRTVSAKSNDEDLAQHYEGYDDTSSAMSSELPSNKTNNPLF
EEGTYSPRSKVAASTARENTSAMITGGDSTVFGSSSSLNPFFSDGGGGSS
LGGAGEGRLSPVVEVNSSTTGSAPSTLNPSQHQQQHDSVASSRALSLAPP
SSAGYNSETDDDDAQSVFRATSPGAVSRPLLPLMASNSPLSCATSLNNSR
SNSFASPTPDFDMVGQSHRDSGRRNMILVPVVIGGGNTFYKGAKALKDRP
ESLEDPTEKPVNNTEAVREVVDAAIQNRDKTGDLIECDKVRQAVRDAVRQ
QRVRSKNVTRSVSHEAHRMPPHCSSPSFDEYPSPRDGTPMTGGGSFTSGS
DYHKVVNRAKSLSPAARRRGSMGSPDLGRLTSGSSISRASSADSGFGRIG
DRPLSPITGQQNSADAAAGVRPSPSVCATAAAATGAAATAATKHHGFPAP
STTKTDVSPATSLIPALTTERAEAAAGASTGGISSTNTSTSTSSGGATGG
VSSTNTSTSTSSTGDELVHGSTGATAVRSTGSGSIASSSSGTNRRRPSPG
GSGLKFTSIGRKMSREKDQAASGSRSATAAGGTGTASIAARGAGAASLLT
DIPAPSAREPGTITTMRAVVDAADAAATEGGGAGARLTSGHRQRQPPPAY
GDEGFSAVLMKGTSTAEAAAGRGGAVVTVATTKALPASALRGSGSFSTRE
PRSVSFADYSDSNSDYEPRLHEEGRAAYGTGATLRQHLADPSRPSGSYRR
HESEDSLSEESISPTYRGGGGASSPSAFTSGTGTAYSTATGSVASGVSSS
GFSVTSSYTQGSRGGYSSVASSSTRAAKKVSYSRRYSSGGSSLSSDLDSD
EDDGSGRGQARGQAIGGRGGVGGESGFLREWHNAPPRSIPSEGDSVTGTA
AIRTRPPADSAGALSSNTSTPSSEYSRLFSSRGRSSEGGGSGTGGNKRRM
QMG*
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