prot_H-paniculata_contig5069.12345.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig5069.12345.1
Unique Name	prot_H-paniculata_contig5069.12345.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	149

Homology

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BLAST of mRNA_H-paniculata_contig5069.12345.1 vs. uniprot
Match: D7FP92_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FP92_ECTSI)

HSP 1 Score: 296 bits (758), Expect = 1.280e-101
Identity = 142/148 (95.95%), Postives = 147/148 (99.32%), Query Frame = 0

Query:    1 MADYEPRGITVRDVAAADFIKAYAEHLKNTGRVELPAWCDLVKTAPHKEMCPYDQDWYYIRAAAIARKVYLRPGRGVGGLSKAFGTKARRGTMTNTHKPASTGIIRHVLQQLESLKVVEKMENGGRQVTRVGQQDLDRIAGAVIRGDD 148
            MADYEPRGITVRDVAAADFIKAYAEHLKNTGRVELP+WCDLVKTAPHKEMCPYDQDWYYIRAAA+ARKVYLRPGRGVGGLSKAFGTKARRGTMTNTHKPA+TGIIRHVLQQLE+LKVVEKMENGGR VTRVGQQDLDRIAGAV+RGDD
Sbjct:    1 MADYEPRGITVRDVAAADFIKAYAEHLKNTGRVELPSWCDLVKTAPHKEMCPYDQDWYYIRAAAVARKVYLRPGRGVGGLSKAFGTKARRGTMTNTHKPAATGIIRHVLQQLEALKVVEKMENGGRTVTRVGQQDLDRIAGAVVRGDD 148

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BLAST of mRNA_H-paniculata_contig5069.12345.1 vs. uniprot
Match: A0A835ZNM6_9STRA (Ribosomal protein S19e n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZNM6_9STRA)

HSP 1 Score: 229 bits (585), Expect = 3.040e-75
Identity = 110/148 (74.32%), Postives = 125/148 (84.46%), Query Frame = 0

Query:    1 MADYEPRGITVRDVAAADFIKAYAEHLKNTGRVELPAWCDLVKTAPHKEMCPYDQDWYYIRAAAIARKVYLRPGRGVGGLSKAFGTKARRGTMTNTHKPASTGIIRHVLQQLESLKVVEKMENGGRQVTRVGQQDLDRIAGAVIRGDD 148
            MA YEP+G++VRDVA A FIKAYA+HLKNTGR ELP W DLVKT   KE+ PYD DWYY+RAAA+ARKVYLRPGRGVGGL+KAFG+  RRGT TN H  AS G+IRH+LQQLE++ VVEK E GGR+VTR GQQDLDRIAGAV RGD+
Sbjct:    1 MATYEPQGVSVRDVAPAKFIKAYADHLKNTGRFELPPWVDLVKTGTQKELAPYDPDWYYVRAAAVARKVYLRPGRGVGGLTKAFGSVERRGTRTNHHARASGGLIRHILQQLETMSVVEKTETGGRKVTREGQQDLDRIAGAVSRGDE 148

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BLAST of mRNA_H-paniculata_contig5069.12345.1 vs. uniprot
Match: A0A8J2WX61_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WX61_9STRA)

HSP 1 Score: 190 bits (483), Expect = 1.110e-59
Identity = 95/146 (65.07%), Postives = 112/146 (76.71%), Query Frame = 0

Query:    1 MADYEPRGITVRDVAAADFIKAYAEHLKNTGRVELPAWCDLVKTAPHKEMCPYDQDWYYIRAAAIARKVYLRPGRGVGGLSKAFGTKARRGTMTNTHKPASTGIIRHVLQQLESLKVVEKMENGGRQVTRVGQQDLDRIAGAVIRG 146
            M +YE RGITVRDVA A FI+AYA HLKN+ R E+P W DLVKT  HKE+ P D DWY++RAA+IARKVYL+PG GVG L K +G + RRG    T + A+ G+IR VLQQLE  KVVEK  +GGR++TRVGQQDLDRIAG V RG
Sbjct:    1 MVEYEARGITVRDVAPAVFIEAYALHLKNSDRFEIPKWTDLVKTGVHKELGPTDDDWYFVRAASIARKVYLKPGVGVGALRKWYGGQYRRGARAKTFQRAAGGLIRSVLQQLEETKVVEKTASGGRRITRVGQQDLDRIAGQVARG 146

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BLAST of mRNA_H-paniculata_contig5069.12345.1 vs. uniprot
Match: A0A8D1BJT9_PIG (Uncharacterized protein n=1 Tax=Sus scrofa TaxID=9823 RepID=A0A8D1BJT9_PIG)

HSP 1 Score: 186 bits (472), Expect = 1.190e-58
Identity = 89/94 (94.68%), Postives = 94/94 (100.00%), Query Frame = 0

Query:   50 MCPYDQDWYYIRAAAIARKVYLRPGRGVGGLSKAFGTKARRGTMTNTHKPASTGIIRHVLQQLESLKVVEKMENGGRQVTRVGQQDLDRIAGAV 143
            MCPYDQDWYYIRAAA+ARKVYLRPGRGVGGLSKAFGTKARRGTMTNTH+PASTGIIRHVLQQLESLKVVEKM+NGGRQ++RVGQQDLDRIAGAV
Sbjct:    1 MCPYDQDWYYIRAAAVARKVYLRPGRGVGGLSKAFGTKARRGTMTNTHRPASTGIIRHVLQQLESLKVVEKMDNGGRQISRVGQQDLDRIAGAV 94

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BLAST of mRNA_H-paniculata_contig5069.12345.1 vs. uniprot
Match: A0A7S1Z1P9_TRICV (Hypothetical protein n=2 Tax=Eupodiscales TaxID=33838 RepID=A0A7S1Z1P9_TRICV)

HSP 1 Score: 187 bits (475), Expect = 1.940e-58
Identity = 94/148 (63.51%), Postives = 110/148 (74.32%), Query Frame = 0

Query:    1 MADYEPRGITVRDVAAADFIKAYAEHLKNTGRVELPAWCDLVKTAPHKEMCPYDQDWYYIRAAAIARKVYLRPGRGVGGLSKAFGTKARRGTMTNTHKPASTGIIRHVLQQLESLKVVEKMENGGRQVTRVGQQDLDRIAGAVIRGDD 148
            MA+ E RGI VRDVAA DFI AYAEHLKN+ + ELP W + VKT   KE+ PY  DWYYIRAA+IARKVYLRPG GVG L K +G   RRGT T   + A++GIIR VL QLE +KV E++  GGR++TRVGQQDLDRIAG V R  +
Sbjct:    1 MAEDEARGICVRDVAAKDFIAAYAEHLKNSDKFELPVWAEQVKTGVFKELAPYGDDWYYIRAASIARKVYLRPGLGVGQLQKWYGGSYRRGTRTEHFRKANSGIIRSVLIQLEGMKVTEQLPGGGRRMTRVGQQDLDRIAGTVFRASE 148

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BLAST of mRNA_H-paniculata_contig5069.12345.1 vs. uniprot
Match: A0A5D6XW04_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XW04_9STRA)

HSP 1 Score: 187 bits (474), Expect = 2.760e-58
Identity = 94/152 (61.84%), Postives = 115/152 (75.66%), Query Frame = 0

Query:    1 MADYE--PRGITVRDVAAADFIKAYAEHLKNTGRVELPAWCDLVKTAPHKEMCPYDQDWYYIRAAAIARKVYLRPGRGVGGLSKAFGTKARRGTMTNTHKPASTGIIRHVLQQLESLKVVEK----MENGGRQVTRVGQQDLDRIAGAVIRG 146
            MA+Y+  PRG+TVRDV AADFIKAYAEHLK +G++ELP+W D+VKTA  KE  P D DWY++RAA+IARKVYLR   GVG L K +G  ARRG      + AS G+IRH+LQQLE +KVV+K    +  GGR++T  GQQDLDRIAG V+RG
Sbjct:    1 MAEYDETPRGVTVRDVKAADFIKAYAEHLKRSGKIELPSWWDIVKTASFKEYSPTDPDWYFVRAASIARKVYLRQYTGVGALKKVYGGAARRGVRHQRFQKASGGLIRHILQQLEEMKVVDKCPEGVNKGGRKITSHGQQDLDRIAGQVVRG 152

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BLAST of mRNA_H-paniculata_contig5069.12345.1 vs. uniprot
Match: K3WSU7_GLOUD (Uncharacterized protein n=2 Tax=Oomycota TaxID=4762 RepID=K3WSU7_GLOUD)

HSP 1 Score: 186 bits (473), Expect = 3.920e-58
Identity = 95/151 (62.91%), Postives = 114/151 (75.50%), Query Frame = 0

Query:    1 MADYE--PRGITVRDVAAADFIKAYAEHLKNTGRVELPAWCDLVKTAPHKEMCPYDQDWYYIRAAAIARKVYLRPGRGVGGLSKAFGTKARRGTMTNTHKPASTGIIRHVLQQLESLKVVEK----MENGGRQVTRVGQQDLDRIAGAVIR 145
            MA+YE  PRG+TVRDV AADFIKAYAEHLK +G++ELP+W D+VKTA  KE  P D DWY++RAA+IARKVYLR   GVG L K +G  ARRG      + AS G+IRH+LQQLE +KVVEK    +  GGR++T  GQQDLDRIAG V+R
Sbjct:    1 MAEYEETPRGVTVRDVKAADFIKAYAEHLKRSGKIELPSWWDIVKTASFKEYSPNDPDWYFVRAASIARKVYLRQYTGVGALKKVYGGAARRGVHRQHFQQASGGLIRHILQQLEEMKVVEKCPEGVNKGGRKITSHGQQDLDRIAGQVVR 151

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BLAST of mRNA_H-paniculata_contig5069.12345.1 vs. uniprot
Match: A0A6V0XZ87_9STRA (Hypothetical protein n=1 Tax=Thalassionema nitzschioides TaxID=33649 RepID=A0A6V0XZ87_9STRA)

HSP 1 Score: 184 bits (467), Expect = 3.010e-57
Identity = 91/145 (62.76%), Postives = 109/145 (75.17%), Query Frame = 0

Query:    1 MADYEPRGITVRDVAAADFIKAYAEHLKNTGRVELPAWCDLVKTAPHKEMCPYDQDWYYIRAAAIARKVYLRPGRGVGGLSKAFGTKARRGTMTNTHKPASTGIIRHVLQQLESLKVVEKMENGGRQVTRVGQQDLDRIAGAVIR 145
            MA+ E RGI VRDV A  FI+AYAEHLKN+ + ELP W D VKT   KE+ PY  DWYYIRAA+IAR+VYL PG GVG L + +G   RRG  T   + A+ GIIR VL QLE++KV EK+ENGGR+++RVGQQDLDRIAG+V R
Sbjct:    1 MAEEEQRGICVRDVTAPSFIEAYAEHLKNSDKFELPVWSDTVKTGVFKELAPYGDDWYYIRAASIARRVYLNPGVGVGQLQRWYGGNYRRGCRTEHFRKANKGIIRSVLLQLENMKVTEKLENGGRRISRVGQQDLDRIAGSVFR 145

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BLAST of mRNA_H-paniculata_contig5069.12345.1 vs. uniprot
Match: A0A7S3L966_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L966_9STRA)

HSP 1 Score: 184 bits (467), Expect = 3.210e-57
Identity = 90/141 (63.83%), Postives = 109/141 (77.30%), Query Frame = 0

Query:    5 EPRGITVRDVAAADFIKAYAEHLKNTGRVELPAWCDLVKTAPHKEMCPYDQDWYYIRAAAIARKVYLRPGRGVGGLSKAFGTKARRGTMTNTHKPASTGIIRHVLQQLESLKVVEKMENGGRQVTRVGQQDLDRIAGAVIR 145
            E RGI VRDV+A  FIKAYAEHLKN+ + +LP W D +KT+   E+ PY  DWYYIRAA+IARKVYLRPG G+G L K +G   RRG  T   + A++G+IR VL QLE +KVVEK+E+GGR+VT VGQQDLDRIAG+VIR
Sbjct:    4 EARGICVRDVSAVSFIKAYAEHLKNSDKFDLPVWADTIKTSVVNELAPYGDDWYYIRAASIARKVYLRPGIGIGQLQKWYGGAYRRGARTEHFRKAASGVIRSVLLQLEEMKVVEKLESGGRRVTTVGQQDLDRIAGSVIR 144

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BLAST of mRNA_H-paniculata_contig5069.12345.1 vs. uniprot
Match: A0A6T7I291_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A6T7I291_9STRA)

HSP 1 Score: 184 bits (466), Expect = 4.550e-57
Identity = 91/144 (63.19%), Postives = 110/144 (76.39%), Query Frame = 0

Query:    5 EPRGITVRDVAAADFIKAYAEHLKNTGRVELPAWCDLVKTAPHKEMCPYDQDWYYIRAAAIARKVYLRPGRGVGGLSKAFGTKARRGTMTNTHKPASTGIIRHVLQQLESLKVVEKMENGGRQVTRVGQQDLDRIAGAVIRGDD 148
            E RGI VRDVAA DFI AYAEHLKN+ + ELP W DLVKT   KE+ PY +DWYY RAA+IARKVYLRPG GVG L K +G   RRG  T   + A++GIIR V+ QLE++KV+E + +GGR++TRVGQQDLDRIAGAV   ++
Sbjct:    8 EVRGICVRDVAADDFIAAYAEHLKNSDKFELPVWADLVKTGVFKELAPYGEDWYYTRAASIARKVYLRPGVGVGMLQKWYGGNYRRGARTEHFRKANSGIIRSVMIQLENMKVIENLPSGGRRMTRVGQQDLDRIAGAVFHDNE 151

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig5069.12345.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig5069.12345.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FP92_ECTSI	1.280e-101	95.95	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]
A0A835ZNM6_9STRA	3.040e-75	74.32	Ribosomal protein S19e n=1 Tax=Tribonema minus Tax...	[more]
A0A8J2WX61_9STRA	1.110e-59	65.07	Hypothetical protein n=1 Tax=Pelagomonas calceolat...	[more]
A0A8D1BJT9_PIG	1.190e-58	94.68	Uncharacterized protein n=1 Tax=Sus scrofa TaxID=9...	[more]
A0A7S1Z1P9_TRICV	1.940e-58	63.51	Hypothetical protein n=2 Tax=Eupodiscales TaxID=33...	[more]
A0A5D6XW04_9STRA	2.760e-58	61.84	Uncharacterized protein n=1 Tax=Pythium brassicum ...	[more]
K3WSU7_GLOUD	3.920e-58	62.91	Uncharacterized protein n=2 Tax=Oomycota TaxID=476...	[more]
A0A6V0XZ87_9STRA	3.010e-57	62.76	Hypothetical protein n=1 Tax=Thalassionema nitzsch...	[more]
A0A7S3L966_9STRA	3.210e-57	63.83	Hypothetical protein n=1 Tax=Amphora coffeiformis ...	[more]
A0A6T7I291_9STRA	4.550e-57	63.19	Hypothetical protein n=1 Tax=Attheya septentrional...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001266	Ribosomal protein S19e	SMART	SM01413	Ribosomal_S19e_2	coord: 10..146 e-value: 8.9E-75 score: 264.4
IPR001266	Ribosomal protein S19e	PFAM	PF01090	Ribosomal_S19e	coord: 10..144 e-value: 1.2E-53 score: 180.5
IPR001266	Ribosomal protein S19e	PANTHER	PTHR11710	40S RIBOSOMAL PROTEIN S19	coord: 8..143
IPR038111	Ribosomal protein S19e domain superfamily	GENE3D	1.10.10.2700		coord: 2..146 e-value: 4.7E-57 score: 194.0
None	No IPR available	PANTHER	PTHR11710:SF14	40S RIBOSOMAL PROTEIN S19-1-RELATED	coord: 8..143
None	No IPR available	PRODOM	PD003854		coord: 11..124 e-value: 5.0E-33 score: 349.0
IPR036390	Winged helix DNA-binding domain superfamily	SUPERFAMILY	46785	"Winged helix" DNA-binding domain	coord: 9..145

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig5069	contig	H-paniculata_contig5069:832..5379 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig5069.12345.1	mRNA_H-paniculata_contig5069.12345.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig5069 42..5379 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig5069.12345.1 ID=prot_H-paniculata_contig5069.12345.1|Name=mRNA_H-paniculata_contig5069.12345.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=149bp
MADYEPRGITVRDVAAADFIKAYAEHLKNTGRVELPAWCDLVKTAPHKEM
CPYDQDWYYIRAAAIARKVYLRPGRGVGGLSKAFGTKARRGTMTNTHKPA
STGIIRHVLQQLESLKVVEKMENGGRQVTRVGQQDLDRIAGAVIRGDD*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001266	Ribosomal_S19e
IPR038111	Ribosomal_S19e_sf
IPR036390	WH_DNA-bd_sf