prot_H-paniculata_contig50688.12344.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig50688.12344.1
Unique Nameprot_H-paniculata_contig50688.12344.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length67
Homology
BLAST of mRNA_H-paniculata_contig50688.12344.1 vs. uniprot
Match: A0A6H5KWX9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWX9_9PHAE)

HSP 1 Score: 136 bits (342), Expect = 1.470e-37
Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = 0
Query:    1 RTKDIFASVGADGSVRMFDLRSLEHSTIIYETHDLTPLMRLSWNKQDPNYLATILTDSAKTVILDIR 67
            RTKDIFASVGADGSVRMFDLRSLEHSTIIYETHDLTPLMRLSWNKQDPNYLATILTDSAKTVILDIR
Sbjct:  179 RTKDIFASVGADGSVRMFDLRSLEHSTIIYETHDLTPLMRLSWNKQDPNYLATILTDSAKTVILDIR 245          
BLAST of mRNA_H-paniculata_contig50688.12344.1 vs. uniprot
Match: D8LR84_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR84_ECTSI)

HSP 1 Score: 134 bits (336), Expect = 1.010e-35
Identity = 66/66 (100.00%), Postives = 66/66 (100.00%), Query Frame = 0
Query:    1 RTKDIFASVGADGSVRMFDLRSLEHSTIIYETHDLTPLMRLSWNKQDPNYLATILTDSAKTVILDI 66
            RTKDIFASVGADGSVRMFDLRSLEHSTIIYETHDLTPLMRLSWNKQDPNYLATILTDSAKTVILDI
Sbjct:  179 RTKDIFASVGADGSVRMFDLRSLEHSTIIYETHDLTPLMRLSWNKQDPNYLATILTDSAKTVILDI 244          
BLAST of mRNA_H-paniculata_contig50688.12344.1 vs. uniprot
Match: A0A7S2FKV7_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FKV7_9STRA)

HSP 1 Score: 114 bits (286), Expect = 5.190e-31
Identity = 55/65 (84.62%), Postives = 62/65 (95.38%), Query Frame = 0
Query:    3 KDIFASVGADGSVRMFDLRSLEHSTIIYETHDLTPLMRLSWNKQDPNYLATILTDSAKTVILDIR 67
            K+IFASVGADGSVR+FDLRSLEHSTIIYE+ +L PL+RL+WNKQDPNYLATILTDS +TVILDIR
Sbjct:    9 KNIFASVGADGSVRLFDLRSLEHSTIIYESENLHPLLRLAWNKQDPNYLATILTDSPRTVILDIR 73          
BLAST of mRNA_H-paniculata_contig50688.12344.1 vs. uniprot
Match: A0A835ZHY0_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHY0_9STRA)

HSP 1 Score: 117 bits (294), Expect = 1.780e-30
Identity = 55/67 (82.09%), Postives = 63/67 (94.03%), Query Frame = 0
Query:    1 RTKDIFASVGADGSVRMFDLRSLEHSTIIYETHDLTPLMRLSWNKQDPNYLATILTDSAKTVILDIR 67
            R K++FASVGADGSVRMFDLRSLEHSTIIYET DLTPL+RL+WNKQDPNY+ATI+ DS+K V+LDIR
Sbjct:  179 RDKEVFASVGADGSVRMFDLRSLEHSTIIYETPDLTPLLRLAWNKQDPNYVATIMVDSSKGVVLDIR 245          
BLAST of mRNA_H-paniculata_contig50688.12344.1 vs. uniprot
Match: A0A7S2Y0K5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y0K5_9STRA)

HSP 1 Score: 116 bits (291), Expect = 5.200e-30
Identity = 55/65 (84.62%), Postives = 61/65 (93.85%), Query Frame = 0
Query:    3 KDIFASVGADGSVRMFDLRSLEHSTIIYETHDLTPLMRLSWNKQDPNYLATILTDSAKTVILDIR 67
            +D+FASVG DGSVRMFDLRSLEHSTIIYET DLTPL+RL+WNKQDPNYLA ILTDS+ TVI+DIR
Sbjct:  185 RDVFASVGGDGSVRMFDLRSLEHSTIIYETADLTPLLRLAWNKQDPNYLAAILTDSSMTVIVDIR 249          
BLAST of mRNA_H-paniculata_contig50688.12344.1 vs. uniprot
Match: A0A7S2EV01_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EV01_TRICV)

HSP 1 Score: 113 bits (282), Expect = 4.550e-29
Identity = 53/67 (79.10%), Postives = 60/67 (89.55%), Query Frame = 0
Query:    1 RTKDIFASVGADGSVRMFDLRSLEHSTIIYETHDLTPLMRLSWNKQDPNYLATILTDSAKTVILDIR 67
            R KD+FASVGADGSVRMFDLRSLEHSTIIYE+ +L PL+RL WNKQDPNYLAT + DS +T+ILDIR
Sbjct:  134 RGKDVFASVGADGSVRMFDLRSLEHSTIIYESPNLDPLLRLEWNKQDPNYLATFMVDSRRTIILDIR 200          
BLAST of mRNA_H-paniculata_contig50688.12344.1 vs. uniprot
Match: A0A4D9DCM3_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DCM3_9STRA)

HSP 1 Score: 112 bits (280), Expect = 5.980e-29
Identity = 53/67 (79.10%), Postives = 60/67 (89.55%), Query Frame = 0
Query:    1 RTKDIFASVGADGSVRMFDLRSLEHSTIIYETHDLTPLMRLSWNKQDPNYLATILTDSAKTVILDIR 67
            R KD+FASVGADGSVRMFDLRSL HSTIIYE+ DL PL+RL+WN+QDPNYLATI+ DS KT +LDIR
Sbjct:  113 RGKDLFASVGADGSVRMFDLRSLVHSTIIYESPDLVPLLRLAWNRQDPNYLATIMADSTKTYLLDIR 179          
BLAST of mRNA_H-paniculata_contig50688.12344.1 vs. uniprot
Match: A0A6V1NZ18_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NZ18_HETAK)

HSP 1 Score: 113 bits (283), Expect = 8.910e-29
Identity = 53/66 (80.30%), Postives = 60/66 (90.91%), Query Frame = 0
Query:    2 TKDIFASVGADGSVRMFDLRSLEHSTIIYETHDLTPLMRLSWNKQDPNYLATILTDSAKTVILDIR 67
            +KDIFASVGADGSVR+FDLRSLEHSTIIYET  LTPL+RL+WNKQDPNYL  I+TDS  TV+LD+R
Sbjct:  192 SKDIFASVGADGSVRLFDLRSLEHSTIIYETQGLTPLLRLAWNKQDPNYLGCIMTDSPTTVLLDVR 257          
BLAST of mRNA_H-paniculata_contig50688.12344.1 vs. uniprot
Match: B7G4D5_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G4D5_PHATC)

HSP 1 Score: 113 bits (283), Expect = 8.910e-29
Identity = 54/67 (80.60%), Postives = 60/67 (89.55%), Query Frame = 0
Query:    1 RTKDIFASVGADGSVRMFDLRSLEHSTIIYETHDLTPLMRLSWNKQDPNYLATILTDSAKTVILDIR 67
            R KD+FASVGADGSVRMFDLRSLEHSTIIYE+ +L PL+RL WNKQDPNYLAT + DS +TVILDIR
Sbjct:  190 RGKDVFASVGADGSVRMFDLRSLEHSTIIYESPNLDPLLRLEWNKQDPNYLATFMVDSRRTVILDIR 256          
BLAST of mRNA_H-paniculata_contig50688.12344.1 vs. uniprot
Match: A0A7S2G9N6_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G9N6_9STRA)

HSP 1 Score: 113 bits (282), Expect = 9.560e-29
Identity = 52/65 (80.00%), Postives = 62/65 (95.38%), Query Frame = 0
Query:    3 KDIFASVGADGSVRMFDLRSLEHSTIIYETHDLTPLMRLSWNKQDPNYLATILTDSAKTVILDIR 67
            K++FASVGADGSVR+FDLRSLEHSTIIYE+ +L PL+RL+WNKQDPNY+AT+LTDS +TVILDIR
Sbjct:  177 KNVFASVGADGSVRLFDLRSLEHSTIIYESENLHPLLRLAWNKQDPNYIATVLTDSPRTVILDIR 241          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig50688.12344.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KWX9_9PHAE1.470e-37100.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LR84_ECTSI1.010e-35100.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2FKV7_9STRA5.190e-3184.62Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A835ZHY0_9STRA1.780e-3082.09WD40-repeat-containing domain protein n=1 Tax=Trib... [more]
A0A7S2Y0K5_9STRA5.200e-3084.62Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2EV01_TRICV4.550e-2979.10Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A4D9DCM3_9STRA5.980e-2979.10Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A6V1NZ18_HETAK8.910e-2980.30Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
B7G4D5_PHATC8.910e-2980.60Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A7S2G9N6_9STRA9.560e-2980.00Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 1..67
e-value: 5.2E-8
score: 34.3
NoneNo IPR availablePANTHERPTHR19919WD REPEAT CONTAINING PROTEINcoord: 3..67
NoneNo IPR availablePANTHERPTHR19919:SF0DDB1- AND CUL4-ASSOCIATED FACTOR 7coord: 3..67
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 5..59

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig50688contigH-paniculata_contig50688:392..592 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig50688.12344.1mRNA_H-paniculata_contig50688.12344.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig50688 392..592 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig50688.12344.1 ID=prot_H-paniculata_contig50688.12344.1|Name=mRNA_H-paniculata_contig50688.12344.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=67bp
RTKDIFASVGADGSVRMFDLRSLEHSTIIYETHDLTPLMRLSWNKQDPNY
LATILTDSAKTVILDIR
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR036322WD40_repeat_dom_sf