mRNA_H-paniculata_contig50674.12340.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig50674.12340.1 vs. uniprot
Match: A0A6H5K0T5_9PHAE (Mur_ligase_M domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K0T5_9PHAE) HSP 1 Score: 84.3 bits (207), Expect = 1.100e-17 Identity = 38/53 (71.70%), Postives = 47/53 (88.68%), Query Frame = 1
Query: 1 QGSVALKMARSLQLGGIRTGLFVSPHVSCFRERMQVDGELISEEGVEEILPKV 159
+GSVA KMARSLQLGG++TGLFVSPH+SCFRER+QVDG I E +E+ILP++
Sbjct: 52 KGSVAFKMARSLQLGGLKTGLFVSPHMSCFRERVQVDGAFIPESSIEDILPRI 104
BLAST of mRNA_H-paniculata_contig50674.12340.1 vs. uniprot
Match: A0A1W0A653_9STRA (Folylpolyglutamate synthase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A653_9STRA) HSP 1 Score: 79.7 bits (195), Expect = 4.490e-16 Identity = 37/55 (67.27%), Postives = 48/55 (87.27%), Query Frame = 1
Query: 1 QGSVALKMARSLQLGGIRTGLFVSPHVSCFRERMQVDGELISEEGVEEILPKVMT 165
+GSV+ K+A SLQ GG +TGLFVSPHVSCFRER+QV+G+LI E+ VE+ILP++ T
Sbjct: 52 KGSVSWKLANSLQAGGFKTGLFVSPHVSCFRERIQVNGQLIREDDVEKILPELFT 106
BLAST of mRNA_H-paniculata_contig50674.12340.1 vs. uniprot
Match: A0A7S4D644_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D644_HETAK) HSP 1 Score: 72.8 bits (177), Expect = 6.650e-14 Identity = 34/54 (62.96%), Postives = 44/54 (81.48%), Query Frame = 1
Query: 1 QGSVALKMARSLQLGGIRTGLFVSPHVSCFRERMQVDGELISEEGVEEILPKVM 162
+GSVALK+A+ L+ G TGLFVSPH+S FRERMQV+G +ISEE VE +LP ++
Sbjct: 56 KGSVALKIAKGLEASGHSTGLFVSPHISSFRERMQVNGAMISEESVENLLPPIL 109
BLAST of mRNA_H-paniculata_contig50674.12340.1 vs. uniprot
Match: A0A418B7Z8_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A418B7Z8_9STRA) HSP 1 Score: 71.6 bits (174), Expect = 1.870e-13 Identity = 32/53 (60.38%), Postives = 45/53 (84.91%), Query Frame = 1
Query: 1 QGSVALKMARSLQLGGIRTGLFVSPHVSCFRERMQVDGELISEEGVEEILPKV 159
+GSV+ K+A++L+ G +TGLFVSPHVSCFRER+QV+G LISE +E++LP +
Sbjct: 53 KGSVSWKLAKALESSGFKTGLFVSPHVSCFRERIQVNGNLISEAQLEDLLPTI 105
BLAST of mRNA_H-paniculata_contig50674.12340.1 vs. uniprot
Match: A0A485LQH4_9STRA (Aste57867_24426 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LQH4_9STRA) HSP 1 Score: 72.0 bits (175), Expect = 2.440e-13 Identity = 33/56 (58.93%), Postives = 45/56 (80.36%), Query Frame = 1
Query: 1 QGSVALKMARSLQLGGIRTGLFVSPHVSCFRERMQVDGELISEEGVEEILPKVMTQ 168
+GSV+ K+A++L+ G +TGLFVSPHVSCFRER+QV+ LISE VE +LP++ Q
Sbjct: 53 KGSVSWKLAKALEASGFKTGLFVSPHVSCFRERIQVNSALISEAQVEALLPQIFNQ 108
BLAST of mRNA_H-paniculata_contig50674.12340.1 vs. uniprot
Match: A0A7S1VY12_9STRA (Hypothetical protein (Fragment) n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1VY12_9STRA) HSP 1 Score: 72.0 bits (175), Expect = 2.510e-13 Identity = 34/55 (61.82%), Postives = 46/55 (83.64%), Query Frame = 1
Query: 1 QGSVALKMARSLQLGGIRTGLFVSPHVSCFRERMQVDGELISEEGVEEILPKVMT 165
+GSV+LK+A+SL+L G + GLFVSPHV+ FRERMQV+ +++SEE V +LPKV T
Sbjct: 209 KGSVSLKIAKSLELAGHKVGLFVSPHVASFRERMQVNSQIMSEEDVVSLLPKVFT 263
BLAST of mRNA_H-paniculata_contig50674.12340.1 vs. uniprot
Match: A0A6G0XEY0_9STRA (Mur_ligase_M domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XEY0_9STRA) HSP 1 Score: 71.6 bits (174), Expect = 3.270e-13 Identity = 33/53 (62.26%), Postives = 44/53 (83.02%), Query Frame = 1
Query: 1 QGSVALKMARSLQLGGIRTGLFVSPHVSCFRERMQVDGELISEEGVEEILPKV 159
+GSV+ K+A++LQ G +TGLFVSPHV+CFRER+QV+ ELISE VE +LP +
Sbjct: 31 KGSVSWKLAKALQASGFKTGLFVSPHVACFRERIQVNSELISETQVEALLPTI 83
BLAST of mRNA_H-paniculata_contig50674.12340.1 vs. uniprot
Match: A0A024USH5_9STRA (Mur_ligase_M domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024USH5_9STRA) HSP 1 Score: 71.6 bits (174), Expect = 3.340e-13 Identity = 32/53 (60.38%), Postives = 45/53 (84.91%), Query Frame = 1
Query: 1 QGSVALKMARSLQLGGIRTGLFVSPHVSCFRERMQVDGELISEEGVEEILPKV 159
+GSV+ K+A++L+ G +TGLFVSPHVSCFRER+QV+G LISE +E++LP +
Sbjct: 53 KGSVSWKLAKALESSGFKTGLFVSPHVSCFRERIQVNGNLISEAQLEDLLPTI 105
BLAST of mRNA_H-paniculata_contig50674.12340.1 vs. uniprot
Match: A0A418DHN4_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A418DHN4_9STRA) HSP 1 Score: 70.1 bits (170), Expect = 3.550e-13 Identity = 32/53 (60.38%), Postives = 44/53 (83.02%), Query Frame = 1
Query: 1 QGSVALKMARSLQLGGIRTGLFVSPHVSCFRERMQVDGELISEEGVEEILPKV 159
+GSV+ K+A++L+ G +TGLFVSPHVSCFRER+QV+ LISE+ VE +LP +
Sbjct: 53 KGSVSWKLAKALESSGFKTGLFVSPHVSCFRERIQVNSALISEDQVEALLPHI 105
BLAST of mRNA_H-paniculata_contig50674.12340.1 vs. uniprot
Match: T0QQ13_SAPDV (Mur_ligase_M domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0QQ13_SAPDV) HSP 1 Score: 71.2 bits (173), Expect = 4.540e-13 Identity = 33/51 (64.71%), Postives = 43/51 (84.31%), Query Frame = 1
Query: 1 QGSVALKMARSLQLGGIRTGLFVSPHVSCFRERMQVDGELISEEGVEEILP 153
+GSV+ K+A++L+ G +TGLFVSPHVSCFRER+Q++GELISE VE LP
Sbjct: 53 KGSVSWKLAKALEASGFKTGLFVSPHVSCFRERIQINGELISEADVETHLP 103 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig50674.12340.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig50674.12340.1 >prot_H-paniculata_contig50674.12340.1 ID=prot_H-paniculata_contig50674.12340.1|Name=mRNA_H-paniculata_contig50674.12340.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=50bp MARSLQLGGIRTGLFVSPHVSCFRERMQVDGELISEEGVEEILPKVMTQ*back to top mRNA from alignment at H-paniculata_contig50674:797..967- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig50674.12340.1 ID=mRNA_H-paniculata_contig50674.12340.1|Name=mRNA_H-paniculata_contig50674.12340.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=171bp|location=Sequence derived from alignment at H-paniculata_contig50674:797..967- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig50674:797..967- >mRNA_H-paniculata_contig50674.12340.1 ID=mRNA_H-paniculata_contig50674.12340.1|Name=mRNA_H-paniculata_contig50674.12340.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=300bp|location=Sequence derived from alignment at H-paniculata_contig50674:797..967- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |