|
|
Homology
BLAST of mRNA_H-paniculata_contig5065.12335.1 vs. uniprot
Match: D7G2P9_ECTSI (ATP synthase: assembly factor for F1 component n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2P9_ECTSI) HSP 1 Score: 160 bits (404), Expect = 4.450e-39 Identity = 93/221 (42.08%), Postives = 128/221 (57.92%), Query Frame = 1
Query: 1129 GKFFQSNTELIPTKLAVDFPHLEATSLAG-------KTVRF-PRILKDGVSLVAVFHRGSGYQMMPSWVEPFEEAFGIASGSNSEGEAREAQQNTTP-KVLQLSLIESWLLRVLKPLAAAGMGSGVPEDKRGSFFYRFGSTDEIQDKLEIRSRVSLDILLVDRMARVRWRGSGQGTPPEIESMIHCARQLI-EGADGVDDIVGTV-------KKKSKRGTA 1740
GK F+++ ELIP K A FP +E ++LA V F R+L V++V +FHR GY M+ SW PFEE F N A P L LSL+ESW LR++KPL + MG G+ +K+ +FFYRFG T+E++ L I +R++L +LLVD+ RVRW+G+G+ TP E+ES++ CARQL EG+ G K K KRGT+
Sbjct: 159 GKIFEASRELIPEKDAEFFPAMEVSNLASDGSAAAASEVDFLSRVLAGRVTMVGLFHRQFGYSMLESWTGPFEETFARGQRGNKLPSAGGKTTGAAPPSALSLSLLESWPLRMMKPLLVSTMGRGLSPEKKAAFFYRFGPTEEVRKALGIVNRLTLYVLLVDQKGRVRWQGTGKATPDEVESLVRCARQLAAEGSGGXXXXXXXXXXXXXXXKSKKKRGTS 379
BLAST of mRNA_H-paniculata_contig5065.12335.1 vs. uniprot
Match: W7TZM8_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TZM8_9STRA) HSP 1 Score: 120 bits (301), Expect = 1.960e-26 Identity = 67/187 (35.83%), Postives = 107/187 (57.22%), Query Frame = 1
Query: 1126 KGKFFQSNTELIPTKLAVDFPHLEATSLAGKTVRFPRILK---DGVSLVAVFHRGSGYQMMPSWVEPFEEAFGIASGSNSEGEAREAQQNTTPKVLQLSLIESWLLRVLKPLAAAGMGSGVPEDKRGSFFYRFGSTDEIQDKLEIRSRVSLDILLVDRMARVRWRGSGQGTPPEIESMIHCARQLIE 1677
K K F+++ EL+P + A+ FP +A SL G T +F +L+ + VSLV V R SG++++P W++PF E F Q VLQ+S + L++LK L G + + ++ G F RFGST +I++ + I +R+ + LVD++ R+RWRG+G+ + EI SM+ CA +L E
Sbjct: 99 KSKLFEADKELVPPQKALKFPSFQAESLLGVTHQFGALLRQTNNQVSLVGVSFRDSGFRVLPDWIKPFLEEFA---------------QTPAMTVLQVSFEDRSWLKLLKFLLVNGQKASIERERHGQSFLRFGSTQDIREGMGIDNRMVGYVFLVDKLGRMRWRGTGRPSDEEIGSMLKCAHELFE 270
BLAST of mRNA_H-paniculata_contig5065.12335.1 vs. uniprot
Match: A0A7S1BRD1_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BRD1_9STRA) HSP 1 Score: 98.6 bits (244), Expect = 1.970e-18 Identity = 61/209 (29.19%), Postives = 109/209 (52.15%), Query Frame = 1
Query: 1144 SNTELIPTKLAVDFPHL-EATSLAGKT-------VRFPRILKDGVSLVAVFHRGSGYQMMPSWVEPFEEAFGIASGSNSEGEAREAQQ--NTTPKVLQLSLIESWLLRVLKPLAAAGMGSGVPEDKRGSFFYRFGSTDEI---QDKLEIRSRVSLDILLVDRMARVRWRGSGQGTPPEIESMIHCARQLIEGADGVDDIVGTVKKKSKR 1731
SN +LI + A+ FP L T+L+G T +R P G +LVA+ + G++M+PSW+ PFE F + + S+ + + + P ++Q+++ E +LR+L + M VP+ + FG +++ +D L + + + ++LVD RVRW GSG EI+ ++ CAR L++G + D+ V ++ +R
Sbjct: 150 SNPQLISSSEALPFPSLYNCTTLSGVTNLSLTDRLRSPSSGSYGCTLVAISFKQYGFEMLPSWIGPFERVFNEENENLSQRRKKHRRSAISVRPNIVQIAISEGGILRLLSSIVTNSMRRNVPQHLHDNTLLHFGDGEDVGILRDVLRMHNDLPGYVVLVDGKGRVRWMGSGLPEEEEIDILVGCARNLMKGEETEDENVDMARRWHRR 358
BLAST of mRNA_H-paniculata_contig5065.12335.1 vs. uniprot
Match: A0A059LKP2_9CHLO (Uncharacterized protein n=1 Tax=Helicosporidium sp. ATCC 50920 TaxID=1291522 RepID=A0A059LKP2_9CHLO) HSP 1 Score: 63.2 bits (152), Expect = 2.090e-7 Identity = 50/197 (25.38%), Postives = 90/197 (45.69%), Query Frame = 1
Query: 1126 KGKFFQSNTELIPTKLAVDFPHLEATSLAGKTVRFPRIL------KDGVSLVAVFHRGSGYQMMPSWVEPFEEAFGIASGSNSEGEAREAQQNTTPKVLQLSLIESWLLRVLKPLAAAGMGSGVPED-KRGSF------FYRFGSTDEIQDKLEIRSRVSLDILLVDRMARVRWRGSGQGTPPEIESMIHCARQLIE 1677
KG+ T L+P + A FP +E G FP L K +LV V R S + +W +PF G ++ ++++++++S ++R L P+ + SG +RG + + FG + +L + + ++ + L+D ARVRW GSG+ P EIE+++ A+ L++
Sbjct: 38 KGRVLPPCTSLLPAQTARAFPRMECVEAHGDAATFPEPLPPRDQHKLRATLVTVASRASAQPYLEAWTKPFTSTLG---------------RHDDLGMVEITIVDSAIMR-LWPMKNLLLYSGRSALLRRGEYDPPTRLLFHFGDAVAPKRELGMVNGLTGYVFLLDSSARVRWWGSGEPRPEEIEALLSSAKTLLQ 218
BLAST of mRNA_H-paniculata_contig5065.12335.1 vs. uniprot
Match: A0A2V3IW83_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IW83_9FLOR) HSP 1 Score: 62.0 bits (149), Expect = 7.690e-7 Identity = 56/189 (29.63%), Postives = 85/189 (44.97%), Query Frame = 1
Query: 1117 SARKGKFFQSNTELIPTKLAVDFPHLEATSLAGKTVRFPRILKDG-VSLVAVFHRGSGYQMMPSWVEPFEEAFGIASGSNSEGEAREAQQNTTPKVLQLS-LIESWLLRVLKPLAAAGMGSGVPEDKRGSFFYRFGSTDEIQDKLEIRSRVSLDILLVDRMARVRWRGSGQGTPPEIESMIHCARQLIE 1677
+ R G+ Q +T LIP A FP ++ TSL+ K + D ++LV V R + SW PF E F EG+ + N + LS ++ W G D SF R + + ++ L R+R+ +LL+DR ARVR+RGSG I+ M+ C +QL++
Sbjct: 72 ATRTGRIAQFDTSLIPVSKANIFPRIKTTSLSTKRIVIHDEAADSPLTLVMVAFRSFADDQLASWRFPFSEHF-------PEGKWFDVTVNESFGAQALSGFVQRW---------QRGRTDQTLHDYYVSFNDR--AREPLETLLLSRNRMYGYVLLLDRKARVRFRGSGMANSHAIDVMVDCGQQLMK 242
BLAST of mRNA_H-paniculata_contig5065.12335.1 vs. uniprot
Match: A0A6S7GT76_PARCT (Uncharacterized protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7GT76_PARCT) HSP 1 Score: 60.1 bits (144), Expect = 2.670e-6 Identity = 41/184 (22.28%), Postives = 82/184 (44.57%), Query Frame = 1
Query: 1120 ARKGKFFQSNTELIPTKLAVDFPHLEATSLAGKTVRFPRILKDGVSLVAVFHRGSGYQMMPSWVEPFEEAFGIASGSNSEGEAREAQQNTTPKVLQLSLIESWLLRVLKPLAAAGMGSGVPEDKRGSFFYRFGSTDEIQDKLEIRSRVSLDILLVDRMARVRWRGSGQGTPPEIESMIHCARQL 1671
A GK + + +E + + P ++ ++AG +V P+ V+L+ ++ R G + + F E F + N K ++SLI+SWL RV++ + +P D++ +F + T+ ++ E + + +L+D+ VRW+ G T E+ ++ C L
Sbjct: 58 ATGGKRYLALSEPFIREESSALPTIQGVTVAGHSVILPQDTLGNVTLLLLWTREHGQKSCDIYRNTFSEKF---------------RTNRNTKYYEVSLIDSWLFRVMRSFINNNLRKQIPSDRQENFLCCYEGTEVVKTLFE--NTLVGHAVLLDQAGFVRWKAHGPPTDEELSYLVKCTNSL 224
BLAST of mRNA_H-paniculata_contig5065.12335.1 vs. uniprot
Match: E1ZLW4_CHLVA (Uncharacterized protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZLW4_CHLVA) HSP 1 Score: 60.5 bits (145), Expect = 3.840e-6 Identity = 47/226 (20.80%), Postives = 83/226 (36.73%), Query Frame = 1
Query: 1126 KGKFFQSNTELIPTKLAVDFPHLEATSLAGKTVRFPRILKD----------------------------------------GVSLVAVFHRGSGYQMMPSWVEPFEEAFGIASGSNSEGEAREAQQNTTPKVLQLSLIESWLLRVL---KPLAAAGMGSGVPEDKRGSFFYRFGSTDEIQDKLEIRSRVSLDILLVDRMARVRWRGSGQGTPPEIESMIHCARQLI 1674
KGK F++ L+P A FP ++ G FP SLV + R M+ +W PF E F SG + +L+++E +LR+ + L +G G+ + FG ++ L++ + ++ + LVD R+RWRGSG + E+++++ C +L+
Sbjct: 69 KGKVFRAPERLVPASHAPAFPRMQVVQSDGSPATFPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGLQPCAASLVCLAFRAGAQPMLEAWASPFSEHFQGRSGV---------------ALYELAIVEGMVLRMWPFKQLLLRSGAGAAAKYALPCRHLHHFGDMQALRQALQLTNLLTGYVFLVDSRGRLRWRGSGNPSAQELQTLLRCTEELL 279
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 161.8 |
| Seed ortholog evalue | 7.9e-37 |
| Seed eggNOG ortholog | 2880.D7G2P9 |
| Preferred name | ATP10 |
| KEGG ko | ko:K13717,ko:K18192 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0006996,GO:0007005,GO:0008150,GO:0009987,GO:0016020,GO:0016021,GO:0016043,GO:0019866,GO:0022607,GO:0031090,GO:0031224,GO:0031300,GO:0031301,GO:0031304,GO:0031305,GO:0031966,GO:0031967,GO:0031975,GO:0032592,GO:0033615,GO:0034622,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043461,GO:0043933,GO:0044085,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044444,GO:0044446,GO:0044455,GO:0044464,GO:0051082,GO:0065003,GO:0070071,GO:0071840,GO:0098573 |
| EggNOG free text desc. | mitochondrial proton-transporting ATP synthase complex assembly |
| EggNOG OGs | KOG4614@1,KOG4614@2759 |
| Ec32 ortholog description | ATP synthase: assembly factor for F1 component |
| Ec32 ortholog | Ec-11_003050.1 |
| EC | 3.4.19.12 |
| COG Functional cat. | S |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko01000,ko01002,ko03029,ko04121 |
| Exons | 5 |
| Model size | 2499 |
| Cds size | 1401 |
| Stop | 1 |
| Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig5065.12335.1 >prot_H-paniculata_contig5065.12335.1 ID=prot_H-paniculata_contig5065.12335.1|Name=mRNA_H-paniculata_contig5065.12335.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=467bp
MTFISGALLSARPLDQPLDQPLDQLRTTIIMAYRQACHRLRATALTSRGI NTTANGGIISRRAHQQQQQQQQRSTLVIVSDATCRNISRNSVGSRSFSSD SSNKAGATANREEQDDTATTPTASTPSLSSLAFKTEPHSSRDEGASHRDV LHSGGVSTGGKAEGRPCSEPQQEQERAPTSAFEDAAAAQPPMKQETVENS KKGGLFGFAALRARAKRSRGEAVKNAVLVEQPRADVKERRHMVEVVNLAS ARKGKFFQSNTELIPTKLAVDFPHLEATSLAGKTVRFPRILKDGVSLVAV FHRGSGYQMMPSWVEPFEEAFGIASGSNSEGEAREAQQNTTPKVLQLSLI ESWLLRVLKPLAAAGMGSGVPEDKRGSFFYRFGSTDEIQDKLEIRSRVSL DILLVDRMARVRWRGSGQGTPPEIESMIHCARQLIEGADGVDDIVGTVKK KSKRGTAWASRGQKRF* back to topmRNA from alignment at H-paniculata_contig5065:2519..14049+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig5065.12335.1 ID=mRNA_H-paniculata_contig5065.12335.1|Name=mRNA_H-paniculata_contig5065.12335.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=11531bp|location=Sequence derived from alignment at H-paniculata_contig5065:2519..14049+ (Halopteris paniculata Hal_grac_a_UBK monoicous) CTACAATCAAGACACCTTCACACGTGGCCAGAGGGTACCTTTGGAGTACG
TTGTTGTGGATATTGCAACGTCCCCAAGTTGTTGTGAGGCTTAACAATAT
GCATATGTATTATGACATGGTAATTAATGCTTTGTTATCTCCCAGCTGCT
CCCCCCCTTCCCCTCCGTTACATAGCATTACACCTCCCCAGTCTACATCT
AACTACAACTCATCAGTATCAACAGTTAAATATGCGTACAATTGTGTTCA
TCGTGCCGTGTTGACGATGCTGATTCTGTTCCTTTTACAATTATCCTGTA
TCTACTCATGTACAACCGTGTTACCAACGGGAGTGGACACGGACAAAAGT
CAAAAGTGAAAGCGAAAAAATGACATTCATATCGGGAGCCCTGCTGTCGG
CGCGGCCGCTGGATCAGCCGCTGGATCAGCCGCTGGATCAGCTGCGCACG
ACGATCATCATGGCATATAGACAGGCATGCCATCGCCTAAGAGCGACAGC
ACTTACATCAAGAGGAATAAACACCACCGCCAACGGTGGTATAATAAGTC
GAAGAGCACATCAACAGCAGCAGCAGCAGCAACAACGATCTACCTTGGTA
ATAGTATCCGATGCAACATGTCGAAACATCAGCCGCAACAGCGTTGGTTC
GCGCTCCTTCTCTTCAGATAGCAGCAACAAAGCTGGTGCTACTGCGAATC
GCGAAGAACAAGACGACACAGCAACTACGCCAACCGCATCGACGCCTAGC
CTCAGCTCCCTTGCTTTCAAGACGGAACCCCATTCTTCAAGAGATGAAGG
CGCATCGCACCGTGATGTCCTCCACAGCGGCGGTGTGTCGACAGGCGGTA
AGGCAGAGGGCAGACCATGCAGTGAACCACAGCAGGAGCAGGAGCGAGCA
CCCACCTCGGCCTTCGAGGATGCTGCTGCAGGTGAAGATTATAAATGGGT
ATCATCTGTCGCTTTGACTTCAGCTTGACCACGCACGTCGTTTGGCGTAG
GTCCTCTTCCTGAGAGAGTAACAAAAGGGGTAACCTAGAAGACCTACCCA
CACTGCAGGCTGGCCTTCACACGAAGTGTCGTGCACACCACAGTATAGCA
CCAACAATTGAGACAATCAAACCCAGTATTCAAGGAGCTGAGCGGGTTTC
CAAGGTGGTGTCGCTGCTTGGCTGTACGGTAATACAATGTTGAGAGCGGT
CGTCAGTGATACAGTGGGGCCAAAGAAAGTCGAAGGCTTAGCCTTTCACA
AGAAGCGGATGCGATGGGTTACCCTACAAAGAAGCTTTCGAATTGAGTCG
ATGTCTGCAATGTTTTGTCGCTGCAGTACTGCTGTTGAAAAATTAGTTTC
ATGTTATCATAGTATTTACCGAATTGGTTGTATATTGGTTGACGGTACGA
AGTCATCATATTAACCCATGCAAGAGGCGTCATGATGTCACTGTCCTGAG
TCGTCATAGCGCGTGCTCCGCACACGTCTGATACTCAAATTGTCACCTAG
GGTGGGGATTACAGTCGCCTATCCACGAATGACCATGCTACAGGGAACAG
AGTTAGGGTTAGCGTTGGTTCTGCTCGCTTCAGGACACATCAAAGCGTCA
AACATTGAAACAGAAAGAACTGACAATCATCATTTTCCACCACGTGGTAA
ACAGGCCTCCCCCATCTCACCGTATGAATACCTGTACAGGTGGCCCAGTC
GGCATACATTTTCCTGGACCTTGTAAACCGTAGACGAGGTTTGTTGCTGC
GCAAGAGGCGGTTCGACAGGAAACAGAGGATTTCCATGACTCCCCCTGTC
TGCTGTGATGATATGCTGTGAACTCGTTGACGTTTCATGTGTTGTGTAGC
AGGGTTACAGACGGAGTTGGCCTCTGCTGCGCTTCGTGTCTACGGCTCGT
TACCCTAGTCTGCAACCCGTCGACCCCACCGATGTTGCAACTATTGATGT
CGCCGCTCTCGGAGGGCGCTAGCCGCCCTCGACTGTGATTGAACTTACTG
CAACACAGGAGATGTGACGAATTTTGGTGTATGAGTGTGTTTTTTTTAAC
ATATTCTGTAGTATATCTATAGTATACATTTCATAAACAAAAGAAACAAA
AGAAAAGTGTTCCGGAACAGATAATCATCCTTGTGGCAAAGTCACATGCA
TCTATCACACTTACACCCGCTCTCCGCGAGTGGTGTCATGATCCATTTGT
AGTACGTATCACCATTCATGGGCAACGCCTTTGTAACTTAATCATTTGCG
CGGGGCGCTGTTTCGCAACAAAAATGCATCTGGTAGTCCCACCTCAGTCG
ACCGTAGGTTTTAGGGTGGGTCGCCTCGGGTGAAGAACTTGTGTCACGCG
GCTGATGCAGCCTCTACTTCATCTCGAGCTTCATCAAGAAGTCAAGAGCC
TTGAGCATCAATAGGTCCTGTGCATATATCGAGAGATGTGTGAAACGTAT
CGATAGATCTCAGTCTTTCTAACCACATATTTTCAGCACCACAAGCCCTC
TGTTCATTTTCGAGAAATTGCTGTCAGAAAATGTTTTTCGGCCGAAAGTG
ATATATACCCTGTCTGTATACAACGATGCGTATCCGAAATATATCGAGAT
GAAAGGTTTATATAACTCTTTCACCACGAATATCCAATTCCCATATACTA
AGCTCGGGCAAAATGTTCAAGACCTTGGTTAGTGAATGATCACCTACCTC
CCTGCGCACGCCATTTCCCCCAAAACCATTCCCCACTTCCCCTGCAAGAA
TCCGCTCCCCGCCGCTCCCTCCCTCTGTCTCCACCCACGGGACTGTCAGC
TTATTTTCATTCGCGATTCAAAAGGTTAAGAAAGGAGGATTCCACCTTCT
ATTGTCGACGGACCCGGGACGAGACGGGATGGAACCACGAGACAAGGATT
CCGACACAAACCGTTGCGGCGGACCGGGATTACGCCAGTGAAACCGTACG
AACGGCGTGGCTACCAACGCTCTCCTCCTCCTAATTTGTTTCTGTTTGGT
TGACTTGTGGAATTAATAATTCAACAATAAAATATCGATTGAGTATGCCT
CCAATTTTGATTCATCGATCGCCCCCCTCTCCCTCTCCCCTCCCCTGCGC
CCCTCCTCTGTCGTACTTGCCCGGGTACCTTTCGAAAACGCACGCATTAG
TAGCGCAACCACCGATGAAGCAGGAGACGGTCGAAAATAGTAAGAAGGGT
GGGTTGTTTGGGTTCGCCGCATTGCGAGCGAGGGCGAAGAGAAGTAGGGG
AGAAGCCGTGAAGAACGCCGTGTTGGTGGAGCAGCCCAGGGCAGATGTCA
AGGAGAGAAGGCATATGGTCGAGGTGGTCAATCTTGCGAGCGCCCGAAAA
GGGTAAGTGATTGTGTCTATTTGATTATATATTTTGATCCCCAAGAGATC
AGGGTAAACCCTTTTCCAACAGTTTTACTGAGAATTTTTCGTCCAGCGTT
CGTACGCTAGCTGTATTACCATGTCATACTCCATCAATTTTTTACTCGGC
CAAAGTATCTGTGATCCCGCAGGTGGGTGCCTCGAGAGGGAATAGTCACA
GTTTAGGTGCCTATGTACTGTGTATGTTTGCGTTCTTCTGTGCCTTGTTT
CTTGGGCTATGTGTTCTCTGTTGTGTAATCCAGTGTTCTGTGTGTCCCTG
CGTTTGTCTGCGTTGTGTCTGGTTTGATGTTTTTGTTTGTGTCTGTATCT
CTGTCGGTATCTCCTTATGTGAACGTTGAACCACCCCGGACGACCAGAAC
TATTTGCGACCAATTTCGATAATAGCTGCCTGAGTTTCAGAATGTGCGGG
ATGGCTGGTGGATGATGACACATAAAATAAGTTGTTCACCTCGATTTTTT
GTTTATACTATCAATAGTAGTCGAAGCAATCGTAGATGGTCCTTCCGGGG
CACATGTAATGAATGTGCTTATTCTGAAAATCAGGTATGTATGAAAAATA
CTAGCAATTAGCCGTAGTCGGGGGTAGATGTTTTTACTCTGCACCTCCTC
CCCCTCGTGTCACGGACAGCGTAGTTAACACAGTGAGACCGACCATTCTA
ATCTAATGCATTGGTAGGATGGGCTGTAGTATCAGTCGTGCCCACGTTCA
CGTCATTCGCCGACGTCAAATGTACAAGTTACAAACCAAGCTTCTTCGCG
AAGCTTAGCGTCCCATCGTCGGACGAAAGCCTTGGCTCTCCTCGCCTCGC
CTCGCCTCGCCTCTCCTCTCCCCGCGTTCCTGAGCCCCCGTGGTCAAACC
GAAAGACGGCCTGATACGATGTATGATTCAGGCTAGCGTTTGGAAAAGTT
GAAGGTGGTGGGAAGCGTGACGTCGTGTGCAGCCCGCAACTCCGGCGCAG
CCGTCGCGGAATGAGGGACTGACTTATTGAGATGGATAACTCGATCCCTA
CAGAGATTCAAATTTGTGTCTCGGGTCCGTGAAGGGGTTCTAACCCGAAT
TTTTCAATGGTTGGCTTCTCCAACTAATCATAGGCCCTACAAGCAGAATA
TATATAATATGGATCGGAATCTATTCATCCATCACGTTAAGACGGGCCCT
TTACAGGCAGCGTTGCAGCGATTGCTTGCCATTTTTTGCCATCCTAGCCC
GGCTTGCTGAGATACCCAATGCACGCCTGGTGTTTAACAGCCAAATGAAT
TGACACCGCGTCTTTACGGCGTGCTTGTTCACCCGAGGTTTGTATTGCCT
TTGTTTATTGCTTTACCCACTGGGTGGCGGTGGCTGGGTGGCACGAGGGT
GGAGCTTCTCTCTGAGTCTCACTTTGTGTCTGCGTGTCGAATCAAAACAC
CGTCGGCAACATTTCCATATTCTCCATTGAACGCTGACATGGCTTCTCCC
TATTACTCGCAAGTCGCAGGCGTGCCCCAGAAACAAAAAGTTGTCACTTC
CCTTAGTTAGTTTTTGTATTATCCGGCTCCACACTAGCCCACGCAGCTGT
GCCACCCTTGCCACAATTACTCAAGAGAGGAGTGATGAGTTTGGTCTGAT
GTGGAAGCGAGCTAGTAGGGCTCCCCCTTCTGTTTTCGTTGATGCCTCGA
ACAATCCTAACACGAAATGATATCTTCATGATGCATTCCCAATGGATCTC
CTACTAAGTTACATCGCATATCGTGCTATCCCTAGTTCTATCACAGTACA
AGTCCATACATGTACTTCATTTATTGGTCCAACAGATCGTCTGTAGAGCA
TCGATTACGAACAAGACGTATTGTCTCGATGAGCAGCAGCGCCCTACCAT
GCGAACATCGCCAATAGCTCAACGAGCATTTCATCGACACTCATTCCGTG
ACCACAATGCAGATTCCCTCGGTCATCACTAGGGAGCCAAGGGTCAAGGC
ATCCAGTATTTTTCTGTGTGTCGTGTGAAGCCAGAGCGCTGGTGAGCTGA
TCGACTGATATGTGTTTCCTGCAAAGGATGTATTCTTACACGTGGGAATC
TAGTGGTTGCGTTGGCAAATCAGACGCCATTGTCATTTTCCAACCGCACC
TGTCGTAGTATGTGATGCACTATCTAGCCTACTATAGTATCTACGGTACG
GGCCGCGGCAAGTACTAGCCCGGGCGTCAAGTTTTTGTTGCAAGTTGGCA
TGCACTCCCAGTGTTATTGTTGGAGCAAAATTTGAAATTTACCTCAGAAA
ACGTAACGAGCGTACCACCCTGTGCCTAAGGGGGGGTTGTTCCAGGTTAC
GGTTTGGGTCTAGCGTTAGAAATCAGGTGATTGCCCGCGGCGATGCACAA
CAGTGCGTGCAGCATCGAACACGAAGGAACTGTTAAGCATCGTTATCGGC
AGAGTTGCACATGAAACAAAAAGTAGCACTAAAGGAGAAGGGCTCTTTTT
TTTTCACGTAACCCATGTCCCTGAGGGGGAATTGATAATGGTTCGTCGTT
CACCTACCGTACACGGTGGACGCAATAAAGTTGGTGAACTTACTATATGC
TGTACCACCCGAATATACAGGGTTTTTCACCCAGGCAAGCATTAGAGGCT
GTGGAGCCATCCATACCCTGTCCCCCCTCCCCCCGTCCGCCCCCCCCTTT
TTTTGTGCTCATAAATGAATGATAATATGTTATTTTCCACGGCTCTTGGG
AAGATGTAAGCTGCACAAACTTATGCAATAAGCTCAATAATTTAGAATCT
ATCACAAATGAACAGGAAGGTGAGCTACTGCATGTAAAGGGGACAGTTGT
TCCCTCGCCCTCCTCTGAACTTGTTTTTCGTTTCATGACCATTTGAGTTA
TGTAAGTGCACATGTCCCCCCCCCCCCCCCCCACCTTTTTTTCATATATA
TGTATTTCTCTTCAATTGCCCTCTGCTCCCCGGCCCCCTCTTGTGGCCCT
TTCCCAGAAAATTCTTCCAGTCAAACACAGAGCTCATCCCCACCAAGCTA
GCGGTGGATTTCCCCCACCTCGAGGCGACGTCGCTTGCGGGGAAAACCGT
GAGGTTTCCCCGTATTTTGAAAGATGGCGTTTCTCTTGTGGCAGTATTCC
ACCGCGGGTCCGGCTACCAGATGATGCCCTCGTGGGTGGAGCCCTTTGAA
GAGGCCTTTGGTATTGCATCCGGTGAGCGGCTGTTGCTTGTGTGTCTGTG
TATGCCTCTGCCTGTATTTTCGTGTGTATCGGTATGCCTACATACATCCC
TGTGTTTGTGCGTATATCTTCCTCGTCCTTTTTTGTATGTGCACCTAGAA
GAGCACCTGGACCCCAGATTGTGGACGACTGACGGTTTCTTGAGCCTGAG
TATTTCATGCTGCCTTTAAATCCTGAAAAGCTATGTGTGGTCGTCCAGAG
TCATGCTTAAAACATCCCCGGGGTTCCGACAAGCATGTTATTTTTGCTAT
TTAGGACACGTGCAGTGTCAACGATGGGACATGGATGGTCACCACAAAAG
GTAACAGTCAGTTCATGGTGAGGTTTGTTTGGGGTGTAATGTAGCTCTGT
CTCTTTGGCTATCATATCGACGTAGATTATTACACGCCCGTTACGGAGAT
GTATATATTTTCGAGAAGATTCAAGACTGCAGTCGGAGCTTGCAGGCAGG
AAAGAAGGGAAAATGCAAGACACAAGCAGTTTTCAGTCTTCATCGTTTCC
TGTCGCTGTATTCGACGCTAATGGTCTGTGATATCTGTTGCGCATTTCCT
CAGTTCCTTTCGTTCCCGGACCCAGTTTCAGAAGTAAAATAACATCTAAT
ATTTACCACGGAAAAAACCCGCCAAAGAGAGGGGTTTCGCCCGGGAAATT
CTGAATTGACACAACGAAGTCGCATGGGTTCCGGCCAATCACAAACTTGT
GGGTTACTGCATTGGCCAATCCCAATCTTTTTATCGCTAGACGTAATTTT
TTTTCTTTTTTTCGAATCGCCGCCTACTGATAATCTCACTGCGGGGAAAT
AGAAGGGTTACAAAATAACGTGCACAAGGAAATTTCTCGTAACACTCTAT
TTGTATCTACCTGGAGACAGTACATATGATGTGCTTGTGTTATGGTCTAC
GTATGCAAGTAAGCGTTGAGCGTTGCCCTGGTGTGTGGCTTTGTGTGGCA
CACACACACGCATGTATACATACACACCACTGCATAGTCAGTCACTCGGC
GTGGCAGTGTTTACGTGCTTTGCCTCCCTATCGAGTGCTGCAGTCGCGGA
ACGCAGAGCCATGCCAACCTCGATCATTTTTGCTGTCCGTCCAACCCTAT
CACTGCTGCTGTCATTTGGACCGCGCTTAAGGATGTGGCTTATTTGGTTC
CATACCCTGGTGTACGGCTTTACGTGGTGCGCACATCCCTGCAAAGTCAG
TCACTCAGCGTGGTGATGTGTGCTCTGTATTCCTATCTATTGCTGCACTT
ACGGCGCGAAGAACCATGCCACCTCTCCGGTCTGTACGTCTGCGCTCATA
CAGGACTGTCTGTTGTAGTGTCTCAGCTCGCCCCTGCCATAGTTATGCCG
TAGGCATTTGCGAGTGTGTTGAAGAAAACATTCCGCATGGCTATTGCAGG
GTGAGGATTATGCGGGATTGAGTTGGATCCAGGGGTTAAAGGGTTGATTA
TTAGGTTCGCCCGAGCGTGTATCCTATATACATACACCTTGGGTATCTCT
CCCTCTCTCTCTCTCTCTCTCTCTCTAAATATATGTATATATATATATGT
ATTATGTATACACACATATATATCGTGAATTGAGCCTCGGGTCCGATATT
AAGATATTCCAGCCAAGTGACTATGCATGAGTTTGCGTGTGTGTGTGTGT
GTGTGTGTATGTTTTCCAAGCGATGCTGATGAATAGTATGCATGAGCAAA
AAAAACACCAGGAAGGCGTTCGCACATGAATTTCCTCTGCGATAGTTTCG
GAATCTTGAAATTTCGACTGTTAACTGTTGACTGTTGACTGTTGATTATT
TGATATATATGTATAGATATATATATACATATATACACATGAATATACGT
TGCGGTTGTGGTCTTTTTGGTTGGACGATAATGTATCCATTAGACAGAAC
AATTTCAGTAAAACGTCTTTGATCGATTGTTCAAAACAGAATACCAAACG
CTACAATAATATGTGTCCAAATCAAACCGTCGATACGAAACGTTGTCAGC
TGTTCCTTACGATTTCTGAATGTTTTTTATCCCAAACATTTTATCCTCTC
AATACATGGAATATCGAATAAAATGCTCAATTGTAACGGAACTTAACTAA
CAGGACATGTGTAACATTTTTTTTTTCTCTCATGACGTATTTTTTATCCT
GTCGAACGTGTTACACTTTGTTTTTTGGGAAAGGTTCGAACTCCGAGGGC
GAGGCGAGGGAAGCACAACAAAATACGACGCCCAAGGTGCTCCAGTTGTC
ATTGATAGAATCCTGGTTGTTAAGGGTCCTGAAACCGCTCGCGGCGGCTG
GAATGGGGAGCGGCGTGCCCGAAGACAAGAGAGGGTCATTCTTTTACCGC
TTCGGCAGCACGGACGAGGTAGGTGTGACATTACCGTGGGAGGACCGTGC
TAGCGTTGTGGTGTCGAGTCTAGGTTCAGGCATGTAGTGTTGGAGTTTAC
AGTTTATTTGGACTGTGCGGAGGGGGGTGGTCCTCCAAAAACGGTTTTCT
CTTCTTGATCGGCGAGAGAGTGAAAGAAATGTTTCGATTATGAGGCAGAA
ATGCCGTAGGGTGATGTGTAGGGGACTGGGGTCCAGGAACTTTCCAAGAC
GTCAGGAACGTCAGGAACGTCAGGAACGTGTGCTCCACATTTGTGATGTA
CGCAGGCAGTGACCAATTTGTTGTTTATTCACGAAATTATGACGTAAACA
TGAATGTGCACGACTACTGTATTATTGCTAATATACAAGCTGATCCAAGC
AAGGTGAACACAGATCCTCCATTAAGGTTCCCCTTCACGGTTTTTACGAG
ATAAAGGCAGATAGAATAACCCGATTAGTCGTATCAATGATACGAATAAC
TTCGCCTGAGGATATTTCCTTCTTTTTCTGTCCGCCCCTGGAGTCGCCTC
TGGAGTTGCCTCTGGAGTCGAAAATTTCGGAGAATAGTCCAGAATGGAAA
ATAATCGAATCGTACAACACGCCTATTCTACACGTAGTTGAAACAAAAAC
AGCAGATTATAATTTATTTTTGGTTTCATGACTAGTAAAAACCGTGGAGG
AAGAACAAATGATGCTCTATACTTGCATTTCGGAATATTATGGGGGATGA
TATATGACATACTCCAAAGCCCCAAAAAATTCATTTACTCGTGAACATCA
CCATGCGGTTTCGAATTAGCTACACATGTTTGGGTGTTTTCTCCCATTTT
GCGGCACTCATTTTCACGGAAATAGCACAAAATCAGTACAAGTATTTCCC
ACCCAACAAGCACAAATATCCTATTTGCCAAGATTGGCGAATTTCCCGCT
CCAGAAACCAAATAAGAGCCCGCGCAGAGTTGTAAGTCTCCTTAATGTGC
AAATTGATTTTTTTTTTGTTCGATAACTCGAGAAAACAGCTGAATGACGG
CTAAAGGAGAGCCAGATTTGGATATCGGAACAACTTTGAGAAGTAATTTC
AATGTACCAAAGGTGGACTTGCAGTCCCGCAGTCGTTGCCTCAGAGACTT
CCCTCCGACCGCGGGTCTGCGTAATCGGGCTGAAATGTTATATAGTAATA
ACAATGATGATTTTGCACTGGCCGAAAATATTTTACCCAGTATGCATTGT
TAGGTCACCCAAACTACACATGGAAGTATAAAATACTCCCCCAGGTCAAT
CATTGGAAAACAACCAAATACACGATTGCTTGAATTAAAATGTCCCCAAA
ACAGGTCTCGGAAAGCAAATTTCTGAAGGCTGCGTTGCCAAAGGGTTGAG
GTTATTTTGTACTTCACCAAGTATTTTCGATTTTCATCTCTGTCTGTAGT
CATGACCCCCAAGTGTACCGAGGCTAACGACGGTCAAAAATGGGAATTTC
TGGACGAACTCACGCAACGGTTCGTCCCTCCAATACATCCTCTATGCGTG
TTTCTTTCTGTCTCCCCCCCCCGATCTTTCTGGCCCTCCCTTGAAATTGC
CTTAATCCACAGATTCAAGATAAATTGGAGATCAGAAGCCGGGTATCCCT
GGACATTTTGCTAGTGGACCGGATGGCTAGGGTGAGGTGGCGAGGCAGTG
GACAAGGCACGCCGCCAGAGATCGAATCTATGATTCACTGCGCGCGGCAG
CTGATTGAGGGGGCAGATGGAGTGGATGATATTGTAGGGACGGTGAAAAA
GAAGAGCAAAAGGGGCACTGCGTGGGCTTCTCGCGGGCAAAAACGGTTTT
AGTGGCAGCGTCGTAGATAGATGGTGTAGGGCTTCTCTTGTGAGGATACG
ATTGCTCCCTGGGCGGCCGGAAGCATGCTCTCCGCACATTCGTAGTTTTG
TTTGGTAGTTTATTTACTATTTCGAAAGCAAATGGGATTCGACCGATGGG
CGCGCTGCCTTGCTTTTGAGAGGGGTAAAGCACACTCGTACCTGTCAAGT
ATCTGGTGGATTGCGGTGACGTACAGCATGCTATTGATTCGTGTAACGCT
TTTTGTGGTGGCGCGAACAGAAGTGCTTGGCGTGGTCATTGGGGAATTGC
GGCTACGATGCAGTGCGAAAGGAGCAAGTATCCCTGCGCGTGTTGTCTGA
CGGTAATTGTCGTCTGGCGTCATTGGGATACGAGAGAAAGGTAAAAGGTG
CCCGCAATTTTCCCATTGGTCAACTTTGATGATGGAAGTGATCTGATTGA
TCGAGAAAAACCCCTTGGCTGACGAGTGATGTCATCGATGGCTATGACGC
CGCTGATGGTGGCGGGGTGATTAATTCGGCCTTTGTTTTTTGAACAAAAG
CAATCGCGAAGAAAACTGTCGCGGTATTTTTCTCTGAGGTTTGCTTATTT
GCGATTTGGTATCATGTGCTAGCATGGGTATGTATTCTTGCGAAGGAGAC
GCTAGACTGCACGGTTTGTCAAGGATTTTTATTTAGACAATTTAATGCGG
TTAATCCCGTCCTTCTACGTATAAAACCTTA back to topCoding sequence (CDS) from alignment at H-paniculata_contig5065:2519..14049+ >mRNA_H-paniculata_contig5065.12335.1 ID=mRNA_H-paniculata_contig5065.12335.1|Name=mRNA_H-paniculata_contig5065.12335.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2802bp|location=Sequence derived from alignment at H-paniculata_contig5065:2519..14049+ (Halopteris paniculata Hal_grac_a_UBK monoicous) ATGACATTCATATCGGGAGCCCTGCTGTCGGCGCGGCCGCTGGATCAGCC GCTGGATCAGCCGCTGGATCAGCTGCGCACGACGATCATCATGGCATATA GACAGGCATGCCATCGCCTAAGAGCGACAGCACTTACATCAAGAGGAATA AACACCACCGCCAACGGTGGTATAATAAGTCGAAGAGCACATCAACAGCA GCAGCAGCAGCAACAACGATCTACCTTGGTAATAGTATCCGATGCAACAT GTCGAAACATCAGCCGCAACAGCGTTGGTTCGCGCTCCTTCTCTTCAGAT AGCAGCAACAAAGCTGGTGCTACTGCGAATCGCGAAGAACAAGACGACAC AGCAACTACGCCAACCGCATCGACGCCTAGCCTCAGCTCCCTTGCTTTCA AGACGGAACCCCATTCTTCAAGAGATGAAGGCGCATCGCACCGTGATGTC CTCCACAGCGGCGGTGTGTCGACAGGCGGTAAGGCAGAGGGCAGACCATG CAGTGAACCACAGCAGGAGCAGGAGCGAGCACCCACCTCGGCCTTCGAGG ATGCTGCTGCAGATGACATTCATATCGGGAGCCCTGCTGTCGGCGCGGCC GCTGGATCAGCCGCTGGATCAGCCGCTGGATCAGCTGCGCACGACGATCA TCATGGCATATAGACAGGCATGCCATCGCCTAAGAGCGACAGCACTTACA TCAAGAGGAATAAACACCACCGCCAACGGTGGTATAATAAGTCGAAGAGC ACATCAACAGCAGCAGCAGCAGCAACAACGATCTACCTTGGTAATAGTAT CCGATGCAACATGTCGAAACATCAGCCGCAACAGCGTTGGTTCGCGCTCC TTCTCTTCAGATAGCAGCAACAAAGCTGGTGCTACTGCGAATCGCGAAGA ACAAGACGACACAGCAACTACGCCAACCGCATCGACGCCTAGCCTCAGCT CCCTTGCTTTCAAGACGGAACCCCATTCTTCAAGAGATGAAGGCGCATCG CACCGTGATGTCCTCCACAGCGGCGGTGTGTCGACAGGCGGTAAGGCAGA GGGCAGACCATGCAGTGAACCACAGCAGGAGCAGGAGCGAGCACCCACCT CGGCCTTCGAGGATGCTGCTGCAGCGCAACCACCGATGAAGCAGGAGACG GTCGAAAATAGTAAGAAGGGTGGGTTGTTTGGGTTCGCCGCATTGCGAGC GAGGGCGAAGAGAAGTAGGGGAGAAGCCGTGAAGAACGCCGTGTTGGTGG AGCAGCCCAGGGCAGATGTCAAGGAGAGAAGGCATATGGTCGAGGTGGTC AATCTTGCGAGCGCCCGAAAAGGCGCAACCACCGATGAAGCAGGAGACGG TCGAAAATAGTAAGAAGGGTGGGTTGTTTGGGTTCGCCGCATTGCGAGCG AGGGCGAAGAGAAGTAGGGGAGAAGCCGTGAAGAACGCCGTGTTGGTGGA GCAGCCCAGGGCAGATGTCAAGGAGAGAAGGCATATGGTCGAGGTGGTCA ATCTTGCGAGCGCCCGAAAAGGAAAATTCTTCCAGTCAAACACAGAGCTC ATCCCCACCAAGCTAGCGGTGGATTTCCCCCACCTCGAGGCGACGTCGCT TGCGGGGAAAACCGTGAGGTTTCCCCGTATTTTGAAAGATGGCGTTTCTC TTGTGGCAGTATTCCACCGCGGGTCCGGCTACCAGATGATGCCCTCGTGG GTGGAGCCCTTTGAAGAGGCCTTTGGTATTGCATCCGAAAATTCTTCCAG TCAAACACAGAGCTCATCCCCACCAAGCTAGCGGTGGATTTCCCCCACCT CGAGGCGACGTCGCTTGCGGGGAAAACCGTGAGGTTTCCCCGTATTTTGA AAGATGGCGTTTCTCTTGTGGCAGTATTCCACCGCGGGTCCGGCTACCAG ATGATGCCCTCGTGGGTGGAGCCCTTTGAAGAGGCCTTTGGTATTGCATC CGGTTCGAACTCCGAGGGCGAGGCGAGGGAAGCACAACAAAATACGACGC CCAAGGTGCTCCAGTTGTCATTGATAGAATCCTGGTTGTTAAGGGTCCTG AAACCGCTCGCGGCGGCTGGAATGGGGAGCGGCGTGCCCGAAGACAAGAG AGGGTCATTCTTTTACCGCTTCGGCAGCACGGACGAGGTTCGAACTCCGA GGGCGAGGCGAGGGAAGCACAACAAAATACGACGCCCAAGGTGCTCCAGT TGTCATTGATAGAATCCTGGTTGTTAAGGGTCCTGAAACCGCTCGCGGCG GCTGGAATGGGGAGCGGCGTGCCCGAAGACAAGAGAGGGTCATTCTTTTA CCGCTTCGGCAGCACGGACGAGATTCAAGATAAATTGGAGATCAGAAGCC GGGTATCCCTGGACATTTTGCTAGTGGACCGGATGGCTAGGGTGAGGTGG CGAGGCAGTGGACAAGGCACGCCGCCAGAGATCGAATCTATGATTCACTG CGCGCGGCAGCTGATTGAGGGGGCAGATGGAGTGGATGATATTGTAGGGA CGGTGAAAAAGAAGAGCAAAAGGGGCACTGCGTGGGCTTCTCGCGGGCAA AAACGGTTTTAGATTCAAGATAAATTGGAGATCAGAAGCCGGGTATCCCT GGACATTTTGCTAGTGGACCGGATGGCTAGGGTGAGGTGGCGAGGCAGTG GACAAGGCACGCCGCCAGAGATCGAATCTATGATTCACTGCGCGCGGCAG CTGATTGAGGGGGCAGATGGAGTGGATGATATTGTAGGGACGGTGAAAAA GAAGAGCAAAAGGGGCACTGCGTGGGCTTCTCGCGGGCAAAAACGGTTTT AG back to top
|