prot_H-paniculata_contig5062.12333.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5062.12333.1
Unique Nameprot_H-paniculata_contig5062.12333.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length140
Homology
BLAST of mRNA_H-paniculata_contig5062.12333.1 vs. uniprot
Match: D7FX95_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FX95_ECTSI)

HSP 1 Score: 155 bits (391), Expect = 2.290e-45
Identity = 81/105 (77.14%), Postives = 90/105 (85.71%), Query Frame = 0
Query:   37 KQYHTPLAVGTLLGMTTMMSQFMFVLFAVFLALAEYADTNALARNDRAMAVFAFFLFLLYGLFSFVLGRYRTTVMNSPGVSSQKEVDGEWQEEEGTDNV--NTPV 139
            K+YHTPLAVGTLLG+TTMMSQFMFVLFAVFLALAEYAD   LA  DR MAVF+FFLFLLYGLFSFVLGRYRTTVMN+PG +S  + +GEWQ+E GTD +   TPV
Sbjct:   83 KKYHTPLAVGTLLGLTTMMSQFMFVLFAVFLALAEYADEPGLATGDRTMAVFSFFLFLLYGLFSFVLGRYRTTVMNTPGTASSND-EGEWQDEPGTDGMAPGTPV 186          
BLAST of mRNA_H-paniculata_contig5062.12333.1 vs. uniprot
Match: A0A835Z9F7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9F7_9STRA)

HSP 1 Score: 81.6 bits (200), Expect = 7.100e-17
Identity = 43/77 (55.84%), Postives = 58/77 (75.32%), Query Frame = 0
Query:   37 KQYHTPLAVGTLLGMTTMMSQFMFVLFAVFLALAEYADTNALARNDRAMAVFAFFLFLLYGLFSFVLGRYRTTVMNS 113
            ++YHTPLAVG LLG+T+M+SQ +FVLFAVFLAL + + T+    +D AMA F F LF L+ LFS VL ++R TV+ +
Sbjct:   86 RKYHTPLAVGLLLGLTSMLSQLLFVLFAVFLALGQESGTHQ--DSDHAMAAFMFILFFLFLLFSIVLAKFRMTVIET 160          
BLAST of mRNA_H-paniculata_contig5062.12333.1 vs. uniprot
Match: W7TD56_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TD56_9STRA)

HSP 1 Score: 63.9 bits (154), Expect = 7.790e-10
Identity = 35/78 (44.87%), Postives = 50/78 (64.10%), Query Frame = 0
Query:   35 TEKQYHTPLAVGTLLGMTTMMSQFMFVLFAVFLALAEYADTNALARNDRAMAVFAFFLFLLYGLFSFVLGRYRTTVMN 112
            T K+  TP+A G  LG   M SQ   +LFA+F+ LA+ +  +   R++ AMAVFAFFLF+LY +FS  L  +R  V++
Sbjct:  101 TMKRLKTPIATGVFLGACIMYSQMQLLLFAIFVGLAQTSSGDVERRSNNAMAVFAFFLFILYTVFSVCLYFFRHYVID 178          
BLAST of mRNA_H-paniculata_contig5062.12333.1 vs. uniprot
Match: A0A482RX29_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RX29_9ARCH)

HSP 1 Score: 55.5 bits (132), Expect = 5.450e-7
Identity = 32/76 (42.11%), Postives = 49/76 (64.47%), Query Frame = 0
Query:   37 KQYHTPLAVGTLLGMTTMMSQFMFVLFAVFLALAEYA-DTNALARNDRAMAVFAFFLFLLYGLFSFVLGRYRTTVM 111
            ++Y T L++G L+G+  +M+Q M +LFAVF   A  + +T    ++  AMAVFAFFLFL+Y  F  +L  +R  V+
Sbjct:   33 RRYQTALSIGFLIGIIFIMTQQMLILFAVFADQANNSGNTLVETQSQEAMAVFAFFLFLVYAAFGSMLSVFRQDVI 108          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5062.12333.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FX95_ECTSI2.290e-4577.14Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835Z9F7_9STRA7.100e-1755.84Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
W7TD56_9STRA7.790e-1044.87Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A482RX29_9ARCH5.450e-742.11Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..47
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 104..139
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 48..72
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 84..103
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 73..83
NoneNo IPR availableTMHMMTMhelixcoord: 47..69
NoneNo IPR availableTMHMMTMhelixcoord: 84..103

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5062contigH-paniculata_contig5062:10080..13134 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5062.12333.1mRNA_H-paniculata_contig5062.12333.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5062 9940..13135 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5062.12333.1 ID=prot_H-paniculata_contig5062.12333.1|Name=mRNA_H-paniculata_contig5062.12333.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=140bp
MWFGAVRCGAVRCGAVRCGAGFKNWALGTCEIIATEKQYHTPLAVGTLLG
MTTMMSQFMFVLFAVFLALAEYADTNALARNDRAMAVFAFFLFLLYGLFS
FVLGRYRTTVMNSPGVSSQKEVDGEWQEEEGTDNVNTPV*
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