mRNA_H-paniculata_contig50587.12324.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig50587.12324.1 vs. uniprot
Match: D8LC73_ECTSI (Mannuronan C-5-epimerase 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC73_ECTSI) HSP 1 Score: 169 bits (428), Expect = 1.420e-44 Identity = 98/202 (48.51%), Postives = 115/202 (56.93%), Query Frame = 1
Query: 115 YDYLGCYGDGATRVFSA-LFVKGQTDMSTATCAEFCSGYKYFGTQHYDECFCGVASDVYTGYGQSTKCVAPCSGDVTETCGGSYALSVYEFSGSSEPPAPTPTPRTSTPSGDYKYTGCFVDSGSDRLLSGDEAKG-DSGMTTAVCAGICVGSTFFGTEYSKECFCGSPGDDPTEASPAS-CTMACAGDSSETCGGRDAISVY 711
Y + GCY D RV S + + M+TA CA+FC G YFG Q ECFC + D G+S C CSGD +E CGGSYA+ VYE+S Y+ GCFVD SDR+LSGD +S MT A CA C GST+FGTEY+ ECFC S GD P E AS C M C+GDSSETCGG +AI VY
Sbjct: 177 YSFAGCYVDSPDRVLSGDSMMSVNSVMTTAYCADFCEGSDYFGVQFGYECFCSSSGDTPDELGESEDCEMACSGDSSEICGGSYAIQVYEYS--DXXXXXXXXXXXXXXXXXYESVGCFVDDSSDRVLSGDSMLSINSVMTAAYCADFCEGSTYFGTEYAFECFCSSSGDSPDELGEASNCDMTCSGDSSETCGGFNAIQVY 376
BLAST of mRNA_H-paniculata_contig50587.12324.1 vs. uniprot
Match: A0A6H5KL84_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL84_9PHAE) HSP 1 Score: 141 bits (355), Expect = 5.820e-38 Identity = 80/202 (39.60%), Postives = 114/202 (56.44%), Query Frame = 1
Query: 109 DDYDYLGCYGDGA-TRVFSALFVKGQTDMSTATCAEFCSGYKYFGTQHYDECFCGVASDVYTGYGQSTKCVAPCSGDVTETCGGSYALSVYEFSGSSEPPAPTPTPRTSTPSGDYKYTGCFVDSGSDRLLSGDEAKGDSGMTTAVCAGICVGSTFFGTEYSKECFCGSPGDDPTEASPASCTMACAGDSSETCGGRDAISVY 711
+D D LGC+ D A R+F DM+ A C++ CS Y Y+GTQ+ EC+CG + Y G S +CV PC+GD +ETCGGSY++SVY+ +E P D Y GC+ D G++R+ D++ + MT VCA C S F+GT+YS+EC+CG + C M C+G+S E+CGG ++ VY
Sbjct: 10 NDTDSLGCFYDPADNRIF--WLATSSDDMTKAVCSDHCSAYPYYGTQYSVECWCGDENADYDANGASNECVMPCAGDASETCGGSYSMSVYQ----NEVEIPV----------DPAYRGCYSDPGTNRVFVQDDSSDE--MTAEVCAAQCDESAFYGTQYSRECWCGDINAQYSVNGVGVCDMPCSGNSEESCGGSYSMDVY 193
BLAST of mRNA_H-paniculata_contig50587.12324.1 vs. uniprot
Match: D8LEK9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEK9_ECTSI) HSP 1 Score: 144 bits (363), Expect = 5.450e-37 Identity = 83/197 (42.13%), Postives = 107/197 (54.31%), Query Frame = 1
Query: 124 LGCYGDGATRVFSALFVKGQTDMSTATCAEFCSGYKYFGTQHYDECFCGVASDVYTGYGQSTKCVAPCSGDVTETCGGSYALSVYEFSGSSEPPAPTPTPRTSTPSGDYKYTGCFVDSGSDRLLSGDEAKGDSGMTTAVCAGICVGSTFFGTEYSKECFCGSPGDD-PTEASPASCTMACAGDSSETCGGRDAISVY 711
LGCY D + M+T C C G YF TQ+ EC+CG A Y +G+ST C CSGD ++TCGG A +VY + S P +PTP+P PS GC+ D DR++ D DS MTT +C C GST+F T+Y +EC+CGS G D CT AC+GD+ +TCGG DA +VY
Sbjct: 200 LGCYEDDPEDRIMDNLALSDSSMTTELCELTCVGSTYFATQYRRECWCGSADADYALHGESTGCTYACSGDTSQTCGGFNAANVYLYPDDSTP-SPTPSPIQEGPS---PALGCYADDPEDRIMD-DLVLSDSSMTTELCELTCEGSTYFATQYGRECWCGSAGADYALHGESTDCTYACSGDTDQTCGGFDAANVY 391
BLAST of mRNA_H-paniculata_contig50587.12324.1 vs. uniprot
Match: D8LNS1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNS1_ECTSI) HSP 1 Score: 135 bits (339), Expect = 2.730e-34 Identity = 79/204 (38.73%), Postives = 106/204 (51.96%), Query Frame = 1
Query: 103 PSDDYDYLGCYGDGATRVFSALFVKGQTDMSTATCAEFCSGYKYFGTQHYDECFCGVASDVYTGYGQSTKCVAPCSGDVTETCGGSYALSVYEFSGSSEPPAPTPTPRTSTPSGDYKYTGCFVDSGSDRLLSGDEAKGDSGMTTAVCAGICVGSTFFGTEYSKECFCGSPGDD-PTEASPASCTMACAGDSSETCGGRDAISVY 711
P+ + Y+GC+ D R+ + + M+T C C+G YF TQ+ EC+CG A Y +G+ST+C C G+ ETCGG YA SVY +S PTPT + Y GCF D DR++ + S MTT +C C GS++F T+Y +EC+CG G D CT C G+ ETCGG A SVY
Sbjct: 122 PTPTFSYVGCFQDDQDRIMELALTE-SSSMTTELCELTCAGSYYFSTQYGRECWCGPAGTDYEKHGESTECTYECPGNPDETCGGFYAASVYAYS----TVEPTPT---------FSYVGCFQDD-QDRIMELALTESSS-MTTELCELTCAGSSYFSTQYGRECWCGPAGTDYEKHGESTECTYECPGNPDETCGGFYAASVY 309
BLAST of mRNA_H-paniculata_contig50587.12324.1 vs. uniprot
Match: A0A225A921_9EURO (Uncharacterized protein n=1 Tax=Talaromyces atroroseus TaxID=1441469 RepID=A0A225A921_9EURO) HSP 1 Score: 137 bits (345), Expect = 2.410e-33 Identity = 79/200 (39.50%), Postives = 101/200 (50.50%), Query Frame = 1
Query: 115 YDYLGCYGDGATRVFSALFVKGQTDMSTATCAEFCSGYKYFGTQHYDECFCGVASDVYTGYGQSTKCVAPCSGDVTETCGGSYALSVYEFSGSSEPPAPTPTPRTSTPSGDYKYTGCFVDSGSDRLLSGDEAKGDSGMTTAVCAGICVGSTFFGTEYSKECFCGSP-GDDPTEASPASCTMACAGDSSETCGGRDAISVY 711
Y YLGCY D +M+ CA FCSGY+YFG ++ +CFCG + T C PC GD TETCGG+ LSVY + TP +T G Y+Y GC+ D+ + R LS S MT CA C G+T+FG EY EC+CG D + C+ C+GDSSE CGG D + +Y
Sbjct: 540 YSYLGCYTDNVNSRTLPAATTSDNNMTLTECANFCSGYQYFGLEYTTQCFCGTGLSSSSTEAAKTDCNMPCGGDSTETCGGANILSVYTNNN-------YVTPGGATIPG-YQYLGCYNDTAAARSLSSTYTY-SSNMTVDACATFCNGATYFGVEYYSECYCGETLAADSAKQPVTDCSYPCSGDSSEFCGGSDRLDLY 730
BLAST of mRNA_H-paniculata_contig50587.12324.1 vs. uniprot
Match: T0KYV9_COLGC (WSC domain-containing protein n=3 Tax=Colletotrichum gloeosporioides species complex TaxID=2707338 RepID=T0KYV9_COLGC) HSP 1 Score: 133 bits (334), Expect = 4.870e-33 Identity = 85/207 (41.06%), Postives = 109/207 (52.66%), Query Frame = 1
Query: 115 YDYLGCYGD---GATRVFSALFVKGQTDMSTATCAEFCSGYKYFGTQHYDECFCGVASDVYTGYGQSTKCVAPCSGDVTETCGGSYALSVYE----FSGSSEPPAPTPTPRTSTPSGDYKYTGCFVDSGSDRLLSGDEAKGDSGMTTAVCAGICVGSTFFGTEYSKECFCGSPGDDPTEASP-ASCTMACAGDSSETCGGRDAISVY 711
Y Y CY D G + +A V DM+ C+ FCS YKYFG ++ EC+CG ST+C PCSG +TCG + +SVYE F P T D Y GCF D G+ R+L + DS MT A CA C G T+FGT++S+EC+CG+ PT ++P A C+M C G SSETCGG +SVY
Sbjct: 5 YSYQSCYTDLIHGQRTLGAATLVA--NDMTIEKCSSFCSNYKYFGVEYAKECWCGNTIQENQVVAVSTECSWPCSGSSLQTCGAASRISVYERWLYF------------PATHAALADTPYVGCFAD-GNTRVLPSKQFTSDS-MTAAACASNCAGYTYFGTQWSRECWCGNTL--PTVSAPDAECSMTCTGSSSETCGGSLRLSVY 193
BLAST of mRNA_H-paniculata_contig50587.12324.1 vs. uniprot
Match: L2FP96_COLFN (Glyoxal oxidase n=3 Tax=Colletotrichum gloeosporioides species complex TaxID=2707338 RepID=L2FP96_COLFN) HSP 1 Score: 134 bits (337), Expect = 2.290e-32 Identity = 86/207 (41.55%), Postives = 109/207 (52.66%), Query Frame = 1
Query: 115 YDYLGCYGD---GATRVFSALFVKGQTDMSTATCAEFCSGYKYFGTQHYDECFCGVASDVYTGYGQSTKCVAPCSGDVTETCGGSYALSVYE----FSGSSEPPAPTPTPRTSTPSGDYKYTGCFVDSGSDRLLSGDEAKGDSGMTTAVCAGICVGSTFFGTEYSKECFCGSPGDDPTEASP-ASCTMACAGDSSETCGGRDAISVY 711
Y Y CY D G + +A V DM+ C+ FCS YKYFG ++ EC+CG ST+C PCSG ETCG + +SVYE F P T D Y GCF D G+ R+L + DS MT A CA C G T+FGT++S+EC+CG+ PT ++P A C+M C G SSETCGG +SVY
Sbjct: 5 YSYQSCYTDLIHGQRTLGAATLVA--NDMTIEKCSSFCSNYKYFGVEYAKECWCGNTIQENQVIAVSTECSWPCSGSSLETCGAASRISVYERWLYF------------PATHATLADTPYVGCFAD-GNTRVLPSKQFTSDS-MTAAACAANCAGYTYFGTQWSRECWCGNTL--PTVSAPDADCSMTCTGSSSETCGGSLRLSVY 193
BLAST of mRNA_H-paniculata_contig50587.12324.1 vs. uniprot
Match: UPI001874BD84 (uncharacterized protein n=1 Tax=Colletotrichum truncatum TaxID=5467 RepID=UPI001874BD84) HSP 1 Score: 134 bits (337), Expect = 2.580e-32 Identity = 83/204 (40.69%), Postives = 119/204 (58.33%), Query Frame = 1
Query: 109 DDYDYLGCYGDGATRVFSALFVKGQTDMSTATCAEFCSGYKYFGTQHYDECFCGVASDVYTGYGQSTKCVAPCSGDVTETCGGSYALSVYEFSGSSEPPAPTPTPRTSTPSGDYKYTGCFVDSGSDRLLSGDEAKGDSGMTTAVCAGICVGS--TFFGTEYSKECFCGSPGDDP-TEASPASCTMACAGDSSETCGGRDAISVY 711
D LGC+ +G RV V +DM+ A CA C+GYKYFGTQ EC+CG + T +++C C+G+ +E CGGS L+VYE SS+ +P P + SG + Y GC+ D+ R+LSG K D MT +CA C S ++FG E+S EC+CG D T + A C+MAC+G+SS++CGG + +S++
Sbjct: 139 DGITSLGCFAEGTQRVLPEKTVAA-SDMTAAKCATNCAGYKYFGTQWSSECYCGNTAPAITV--PTSECNMVCAGNSSELCGGSLRLNVYELPQSSQA-SPLSVPVIPSVSG-FDYKGCYTDNVPYRVLSGKVIK-DPAMTLEMCAAACKNSGYSWFGVEFSTECYCGMALDKASTSTAAAECSMACSGNSSQSCGGANRLSLF 336
BLAST of mRNA_H-paniculata_contig50587.12324.1 vs. uniprot
Match: A0A1B8C8J0_9PEZI (Uncharacterized protein n=6 Tax=Pseudogymnoascus TaxID=78156 RepID=A0A1B8C8J0_9PEZI) HSP 1 Score: 131 bits (329), Expect = 3.580e-32 Identity = 75/201 (37.31%), Postives = 106/201 (52.74%), Query Frame = 1
Query: 112 DYDYLGCYGDGATRVFSALFVKGQTDMSTATCAEFCSGYKYFGTQHYDECFCGVASDVYTGYGQSTKCVAPCSGDVTETCGGSYALSVYEFSGSSEPPAPTPTPRTSTPSGDYKYTGCFVDSGSDRLLSGDEAKGDSGMTTAVCAGICVGSTFFGTEYSKECFCGSP-GDDPTEASPASCTMACAGDSSETCGGRDAISVY 711
DYD++ C+ + A A DM+ A CA FC+ Y YFGT+ EC+CG A + +C PC+GD ++ CGGS LS+Y+ S + P P G+Y++ GC DS R L+ D + D+ MT CA C G T+FGTE+S EC+CG+ T C+M C+G+ + CG D +SVY
Sbjct: 248 DYDFVYCWAEPAAGRALAAKSTAADDMTLAKCATFCAAYPYFGTEWSKECWCGNAPATGSALAPLGECDYPCAGDASQLCGGSRRLSLYQNSALTGPQQPNTV-------GNYEFQGCVTDSQGVRTLTQDMLRSDT-MTLETCATFCGGYTYFGTEWSTECWCGNTLTTGATIVDSGDCSMTCSGNGDQLCGNGDRLSVY 440
BLAST of mRNA_H-paniculata_contig50587.12324.1 vs. uniprot
Match: A0A094G9X3_9PEZI (Uncharacterized protein n=2 Tax=unclassified Pseudogymnoascus TaxID=2637121 RepID=A0A094G9X3_9PEZI) HSP 1 Score: 130 bits (328), Expect = 4.980e-32 Identity = 78/202 (38.61%), Postives = 105/202 (51.98%), Query Frame = 1
Query: 112 DYDYLGCYGD-GATRVFSALFVKGQTDMSTATCAEFCSGYKYFGTQHYDECFCGVASDVYTGYGQSTKCVAPCSGDVTETCGGSYALSVYEFSGSSEPPAPTPTPRTSTPSGDYKYTGCFVDSGSDRLLSGDEAKGDSGMTTAVCAGICVGSTFFGTEYSKECFCGSP-GDDPTEASPASCTMACAGDSSETCGGRDAISVY 711
DY+++ C+ + A R SA DM+ CA FC+ Y YFGT+ ECFCG +G +C C+GD T+ CGGS LS+Y G + P P G+YK GC DS R LS D + D MT CA C G T+FGTE+S EC+CG+ T + C+M C+G+ ++ CG D +SVY
Sbjct: 248 DYEFIHCWSEPSAGRALSAKSTAAD-DMTLEKCAAFCAAYPYFGTEWSRECFCGNTPATGSGLAPLEECNYACTGDATQACGGSRRLSLYRNEGLTGPQQPGTV-------GNYKLHGCVTDSQGLRTLSQDMLRSDD-MTLETCATFCGGYTYFGTEWSTECWCGNTLATGATTVDASQCSMTCSGNGNQLCGNGDRLSVY 440 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig50587.12324.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig50587.12324.1 >prot_H-paniculata_contig50587.12324.1 ID=prot_H-paniculata_contig50587.12324.1|Name=mRNA_H-paniculata_contig50587.12324.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=237bp PAIVVDPIKPVDPIKPVDPIKPVDPTPPTPPTPTPSDDYDYLGCYGDGATback to top mRNA from alignment at H-paniculata_contig50587:165..1252+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig50587.12324.1 ID=mRNA_H-paniculata_contig50587.12324.1|Name=mRNA_H-paniculata_contig50587.12324.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1088bp|location=Sequence derived from alignment at H-paniculata_contig50587:165..1252+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig50587:165..1252+ >mRNA_H-paniculata_contig50587.12324.1 ID=mRNA_H-paniculata_contig50587.12324.1|Name=mRNA_H-paniculata_contig50587.12324.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1422bp|location=Sequence derived from alignment at H-paniculata_contig50587:165..1252+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |