prot_H-paniculata_contig5056.12321.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5056.12321.1
Unique Nameprot_H-paniculata_contig5056.12321.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length152
Homology
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BLAST of mRNA_H-paniculata_contig5056.12321.1 vs. uniprot
Match: A0A6H5JZ54_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ54_9PHAE)

HSP 1 Score: 53.5 bits (127), Expect = 2.130e-5
Identity = 21/37 (56.76%), Postives = 29/37 (78.38%), Query Frame = 0 
Query:    8 CSNQGCSTRPRYGMAGTRKAEFCARHAEKGMVDVLNK 44
            C   GC+TRP YG A ++KAEFC++H E+GM+DV +K
Sbjct:   29 CREHGCTTRPSYGRAHSKKAEFCSQHRERGMIDVRSK 65
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BLAST of mRNA_H-paniculata_contig5056.12321.1 vs. uniprot
Match: D8LCH9_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCH9_ECTSI)

HSP 1 Score: 52.0 bits (123), Expect = 3.220e-5
Identity = 21/36 (58.33%), Postives = 29/36 (80.56%), Query Frame = 0 
Query:    6 KKCSNQGCSTRPRYGMAGTRKAEFCARHAEKGMVDV 41
            K C + GC+TR  +G+ G++KAEFC+RHAE GMVD+
Sbjct:    7 KTCDHVGCTTRANFGVPGSKKAEFCSRHAEDGMVDL 42
[Close]
BLAST of mRNA_H-paniculata_contig5056.12321.1 vs. uniprot
Match: A0A6H5KW71_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW71_9PHAE)

HSP 1 Score: 52.4 bits (124), Expect = 5.010e-5
Identity = 20/37 (54.05%), Postives = 29/37 (78.38%), Query Frame = 0 
Query:    8 CSNQGCSTRPRYGMAGTRKAEFCARHAEKGMVDVLNK 44
            C + GC  +P+YG+AGT+K EFC+ H + GMVDV+N+
Sbjct:    4 CGHAGCPKQPKYGVAGTKKREFCSGHRKAGMVDVVNR 40
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5056.12321.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JZ54_9PHAE2.130e-556.76Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LCH9_ECTSI3.220e-558.33EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
A0A6H5KW71_9PHAE5.010e-554.05Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5056contigH-paniculata_contig5056:11911..12366 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5056.12321.1mRNA_H-paniculata_contig5056.12321.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5056 11783..12366 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5056.12321.1 ID=prot_H-paniculata_contig5056.12321.1|Name=mRNA_H-paniculata_contig5056.12321.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=152bp
MPFQRKKCSNQGCSTRPRYGMAGTRKAEFCARHAEKGMVDVLNKTCSHQG
CSTFPSNEVAGTRKAEFCARHAEKGMVDVVNKTCSHQGCSTQPRYGVAGT
RKAEVCARHAEKGMVNVLNKTCSYQGCSTQPVYGEAGMRKAEFCARHAEK
GM
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