prot_H-paniculata_contig5054.12320.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5054.12320.1
Unique Nameprot_H-paniculata_contig5054.12320.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length258
Homology
BLAST of mRNA_H-paniculata_contig5054.12320.1 vs. uniprot
Match: A0A6H5L1A0_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1A0_9PHAE)

HSP 1 Score: 141 bits (356), Expect = 2.120e-36
Identity = 88/199 (44.22%), Postives = 116/199 (58.29%), Query Frame = 0
Query:   63 IAVRVATDIASDQIESACIEPLTVNSEPIHHNPNHKYIWRQRVLARTVSHWEPNSTHGTIVVQLANPSNSGVTISAKTGLGHIAPVTVVPPSVVSTVAITAEDKTTVR---DELADVLKNTFSNTTFDKEQWSRVPDLCANHRSVFTLSPNELGTYTLAKAEFPSQPGTKPVDKPAYRANPRTQRVIHQCVDNMKAQGI 258
            +AV V T  A      A +EP  V ++ I  + N    +R  V+ARTV +W          VQ+ANPS   V I+  T LG+I+PV  V    VS V     D+TT R   DEL   +K  F++TT    Q S+V DLCA +R+VF+LSP ELG  T+AKA+FP +PGTKPVD+  YR NPR Q VI +CV+ M+ + I
Sbjct:    1 MAVDVVTQHAPQANTPALVEPRIVTAQDIETSENIPEAFRTIVVARTVCNWSAKDKSA--AVQVANPSKRHVHIARDTILGYISPVKSVADKTVSAVN---SDQTTFRHKRDELKRAMKKAFTSTTLTPHQCSQVLDLCAKYRNVFSLSPKELGKCTIAKADFPLEPGTKPVDRAPYRTNPRAQEVIDKCVEQMEDEEI 194          
BLAST of mRNA_H-paniculata_contig5054.12320.1 vs. uniprot
Match: A0A6H5KKE6_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKE6_9PHAE)

HSP 1 Score: 144 bits (362), Expect = 1.620e-35
Identity = 89/199 (44.72%), Postives = 117/199 (58.79%), Query Frame = 0
Query:   63 IAVRVATDIASDQIESACIEPLTVNSEPIHHNPNHKYIWRQRVLARTVSHWEPNSTHGTIVVQLANPSNSGVTISAKTGLGHIAPVTVVPPSVVSTVAITAEDKTTVR---DELADVLKNTFSNTTFDKEQWSRVPDLCANHRSVFTLSPNELGTYTLAKAEFPSQPGTKPVDKPAYRANPRTQRVIHQCVDNMKAQGI 258
            +AV V T  A      A +EP  V ++ I  + N    +R  V+ARTV +W          VQ+ANPS   V I+  T LG+I+PV  V    VS V     D+TT R   DEL   +K  F+NTTF  +Q S+V DLCA +R+VF+LSP ELG   +AKA+FP +PGTKPVD+  YR NPR Q VI +CV+ M+ + I
Sbjct:    1 MAVDVVTKHAPQANTPALVEPRIVTAQDIETSENIPEAFRTIVVARTVCNWSAKDKSA--AVQVANPSKRHVHIARDTILGYISPVKSVADKTVSAVN---SDQTTFRHKRDELKRAMKKAFTNTTFTPQQCSQVLDLCAKYRNVFSLSPKELGKCRIAKADFPLEPGTKPVDRAPYRTNPRAQEVIDKCVEQMEDEEI 194          
BLAST of mRNA_H-paniculata_contig5054.12320.1 vs. uniprot
Match: A0A6H5JXY7_9PHAE (RT_RNaseH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXY7_9PHAE)

HSP 1 Score: 121 bits (303), Expect = 1.560e-27
Identity = 73/195 (37.44%), Postives = 109/195 (55.90%), Query Frame = 0
Query:   69 TDIASDQIESACIEPLTVNSEPIHHNPNHKYIWRQRVLARTVSHWEPNSTHGTIVVQLANPSNSGVTISAKTGLGHIAPVTVVPP-----SVVSTVAITAEDKTTVRDELADVLKNTFSNTTFDKEQWSRVPDLCANHRSVFTLSPNELGTYTLAKAEFPSQPGTKPVDKPAYRANPRTQRVIHQCVDNMKAQGI 258
            TD    +  +  +EP  V  + + H+      ++  V+ART++ W  +++ G++VVQ+ANPS  GV +     LG ++ VT+  P     + V+   +T ++    + EL + L   F NTT   EQ   V DLCA +R VF+LS +ELG  T+A+A FP  PGT+PVD+P YR NPR   V  +CV  M   GI
Sbjct:   10 TDCRPPEDCTVVVEPRIVAEQDLVHDETLISPFQNIVVARTLATW--HASDGSVVVQIANPSADGVRLYDGLCLGQLSTVTITEPDQLHVNSVANTPVTDDEIRHAKSELEEPLSKAFDNTTLTNEQQQAVLDLCAKYRPVFSLSMSELGRCTIAEATFPVPPGTRPVDRPPYRPNPRVATVSDKCVAEMLEWGI 202          
BLAST of mRNA_H-paniculata_contig5054.12320.1 vs. uniprot
Match: A0A6H5JGV3_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGV3_9PHAE)

HSP 1 Score: 119 bits (299), Expect = 3.630e-27
Identity = 73/195 (37.44%), Postives = 110/195 (56.41%), Query Frame = 0
Query:   69 TDIASDQIESACIEPLTVNSEPIHHNPNHKYIWRQRVLARTVSHWEPNSTHGTIVVQLANPSNSGVTISAKTGLGHIAPVTVVPP-----SVVSTVAITAEDKTTVRDELADVLKNTFSNTTFDKEQWSRVPDLCANHRSVFTLSPNELGTYTLAKAEFPSQPGTKPVDKPAYRANPRTQRVIHQCVDNMKAQGI 258
            TD    +  +  +EP  V+ + + H+      ++  V+ART++ W  +++ G++VVQ+ANPS  GV +     LG ++ VT+  P     + V+   +T ++    + EL + L   F NTT   EQ   V DLCA +R VF+LS +ELG  T+A+A FP  PGT+PVD+P YR NPR   V  +CV  M   GI
Sbjct:   10 TDCRPPEDCTVVVEPRIVSEQDLVHDETLS-PFQNIVVARTLATW--HASDGSVVVQIANPSADGVRLYDGLCLGQLSTVTITEPDQLHVNSVANTPVTDDEIRHAKSELEEPLSKAFDNTTLTNEQQQAVLDLCAKYRPVFSLSMSELGRCTIAEATFPVPPGTRPVDRPPYRPNPRVATVSDKCVAEMLEWGI 201          
BLAST of mRNA_H-paniculata_contig5054.12320.1 vs. uniprot
Match: A0A6H5K112_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K112_9PHAE)

HSP 1 Score: 119 bits (299), Expect = 5.910e-27
Identity = 73/195 (37.44%), Postives = 110/195 (56.41%), Query Frame = 0
Query:   69 TDIASDQIESACIEPLTVNSEPIHHNPNHKYIWRQRVLARTVSHWEPNSTHGTIVVQLANPSNSGVTISAKTGLGHIAPVTVVPP-----SVVSTVAITAEDKTTVRDELADVLKNTFSNTTFDKEQWSRVPDLCANHRSVFTLSPNELGTYTLAKAEFPSQPGTKPVDKPAYRANPRTQRVIHQCVDNMKAQGI 258
            TD    +  +  +EP  V+ + + H+      ++  V+ART++ W  +++ G++VVQ+ANPS  GV +     LG ++ VT+  P     + V+   +T ++    + EL + L   F NTT   EQ   V DLCA +R VF+LS +ELG  T+A+A FP  PGT+PVD+P YR NPR   V  +CV  M   GI
Sbjct:   10 TDCRPPEDCTVVVEPRIVSEQDLVHDETLS-PFQNIVVARTLATW--HASDGSVVVQIANPSADGVRLYDGLCLGQLSTVTITEPDQLHVNSVANTPVTDDEIRHAKSELEEPLSKAFDNTTLTNEQQQAVLDLCAKYRPVFSLSMSELGRCTIAEATFPVPPGTRPVDRPPYRPNPRVATVSDKCVAEMLEWGI 201          
BLAST of mRNA_H-paniculata_contig5054.12320.1 vs. uniprot
Match: A0A6H5KCT5_9PHAE (Reverse transcriptase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCT5_9PHAE)

HSP 1 Score: 92.0 bits (227), Expect = 9.580e-18
Identity = 45/92 (48.91%), Postives = 60/92 (65.22%), Query Frame = 0
Query:  162 TAEDKTTVRDELADVLKNTFSNTTFDKEQWSRVPDLCANHRSVFTLSPNELGTYTLAKAEFPSQPGTKPVDKPAYRANPRTQRVIHQCVDNM 253
            TA +    + EL + L   F+N+TF KEQ +R+ DLCA +R VF+L+  ELG  T A+A FP  P TKPV++  YRANP T+ VI  CV +M
Sbjct:   18 TASEIAAAKAELVEPLSKAFANSTFTKEQQTRILDLCAKYRPVFSLNRKELGKCTTAQATFPMPPNTKPVNRRPYRANPHTEAVIQTCVKDM 109          
BLAST of mRNA_H-paniculata_contig5054.12320.1 vs. uniprot
Match: A0A6H5K0N6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0N6_9PHAE)

HSP 1 Score: 89.0 bits (219), Expect = 1.210e-16
Identity = 44/92 (47.83%), Postives = 58/92 (63.04%), Query Frame = 0
Query:  162 TAEDKTTVRDELADVLKNTFSNTTFDKEQWSRVPDLCANHRSVFTLSPNELGTYTLAKAEFPSQPGTKPVDKPAYRANPRTQRVIHQCVDNM 253
            TA +    + EL + L   F+N+TF KEQ +R+ DLCA +R VF+L+  ELG  T A+A  P  P TKPV+   YRANP T+ VI  CV +M
Sbjct:  217 TASEIAAAKAELVEPLSKAFANSTFTKEQQTRILDLCAKYRPVFSLNRKELGKCTTAQARLPMPPNTKPVNHRPYRANPHTEAVIQTCVKDM 308          
BLAST of mRNA_H-paniculata_contig5054.12320.1 vs. uniprot
Match: A0A6H5K563_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K563_9PHAE)

HSP 1 Score: 85.9 bits (211), Expect = 1.440e-16
Identity = 43/92 (46.74%), Postives = 58/92 (63.04%), Query Frame = 0
Query:  162 TAEDKTTVRDELADVLKNTFSNTTFDKEQWSRVPDLCANHRSVFTLSPNELGTYTLAKAEFPSQPGTKPVDKPAYRANPRTQRVIHQCVDNM 253
            TA +    + EL + L   F+N+TF KEQ +R+ DLCA +R VF+L+  ELG    A+A FP  P TK V++  YRANP T+ VI  CV +M
Sbjct:   39 TASEIAAAKAELVEPLSKAFANSTFTKEQQTRILDLCAKYRPVFSLNRKELGKCKTAQATFPMPPNTKLVNRRPYRANPHTEAVIQTCVKDM 130          
BLAST of mRNA_H-paniculata_contig5054.12320.1 vs. uniprot
Match: A0A6H5K153_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K153_9PHAE)

HSP 1 Score: 85.9 bits (211), Expect = 2.160e-15
Identity = 44/92 (47.83%), Postives = 57/92 (61.96%), Query Frame = 0
Query:  162 TAEDKTTVRDELADVLKNTFSNTTFDKEQWSRVPDLCANHRSVFTLSPNELGTYTLAKAEFPSQPGTKPVDKPAYRANPRTQRVIHQCVDNM 253
            TA +    + EL   L   F+N TF KEQ +R+ DL A +R VF+L+  ELG  T A+A FP  P TKPV++  YRANP T+ VI  CV +M
Sbjct:   41 TASEIAAAKAELGKPLSKAFANFTFTKEQQTRILDLSAKYRPVFSLNRKELGKCTTAQATFPMPPNTKPVNRRPYRANPHTEAVIQTCVKDM 132          
BLAST of mRNA_H-paniculata_contig5054.12320.1 vs. uniprot
Match: A0A6H5K3U6_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3U6_9PHAE)

HSP 1 Score: 62.0 bits (149), Expect = 2.480e-7
Identity = 28/49 (57.14%), Postives = 36/49 (73.47%), Query Frame = 0
Query:  210 NELGTYTLAKAEFPSQPGTKPVDKPAYRANPRTQRVIHQCVDNMKAQGI 258
            +ELG  T+A+A FP  PGT+PVD+P YR NPRT  VI +CV++M   GI
Sbjct:    2 SELGRCTIAEATFPVPPGTRPVDRPPYRPNPRTSAVIDKCVEDMLEWGI 50          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5054.12320.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
A0A6H5L1A0_9PHAE2.120e-3644.22Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KKE6_9PHAE1.620e-3544.72Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JXY7_9PHAE1.560e-2737.44RT_RNaseH domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JGV3_9PHAE3.630e-2737.44Reverse transcriptase domain-containing protein n=... [more]
A0A6H5K112_9PHAE5.910e-2737.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KCT5_9PHAE9.580e-1848.91Reverse transcriptase domain-containing protein n=... [more]
A0A6H5K0N6_9PHAE1.210e-1647.83Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K563_9PHAE1.440e-1646.74Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K153_9PHAE2.160e-1547.83Reverse transcriptase domain-containing protein n=... [more]
A0A6H5K3U6_9PHAE2.480e-757.14Reverse transcriptase domain-containing protein n=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5054contigH-paniculata_contig5054:6910..7683 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5054.12320.1mRNA_H-paniculata_contig5054.12320.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5054 5389..7683 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5054.12320.1 ID=prot_H-paniculata_contig5054.12320.1|Name=mRNA_H-paniculata_contig5054.12320.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=258bp
MLLDNSILNAFRATLDWDKLTMSFGDSQVPIPAIHPKSANRASNMHTPVY
LPRKCNIPAGHEIAVRVATDIASDQIESACIEPLTVNSEPIHHNPNHKYI
WRQRVLARTVSHWEPNSTHGTIVVQLANPSNSGVTISAKTGLGHIAPVTV
VPPSVVSTVAITAEDKTTVRDELADVLKNTFSNTTFDKEQWSRVPDLCAN
HRSVFTLSPNELGTYTLAKAEFPSQPGTKPVDKPAYRANPRTQRVIHQCV
DNMKAQGI
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