mRNA_H-paniculata_contig5054.12320.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_H-paniculata_contig5054.12320.1
Unique Name	mRNA_H-paniculata_contig5054.12320.1
Type	mRNA
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)

Homology

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BLAST of mRNA_H-paniculata_contig5054.12320.1 vs. uniprot
Match: A0A6H5L1A0_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1A0_9PHAE)

HSP 1 Score: 141 bits (356), Expect = 4.430e-33
Identity = 88/199 (44.22%), Postives = 116/199 (58.29%), Query Frame = 1

Query: 1708 IAVRVATDIASDQIESACIEPLTVNSEPIHHNPNHKYIWRQRVLARTVSHWEPNSTHGTIVVQLANPSNSGVTISAKTGLGHIAPVTVVPPSVVSTVAITAEDKTTVR---DELADVLKNTFSNTTFDKEQWSRVPDLCANHRSVFTLSPNELGTYTLAKAEFPSQPGTKPVDKPAYRANPRTQRVIHQCVDNMKAQGI 2295
            +AV V T  A      A +EP  V ++ I  + N    +R  V+ARTV +W          VQ+ANPS   V I+  T LG+I+PV  V    VS V     D+TT R   DEL   +K  F++TT    Q S+V DLCA +R+VF+LSP ELG  T+AKA+FP +PGTKPVD+  YR NPR Q VI +CV+ M+ + I
Sbjct:    1 MAVDVVTQHAPQANTPALVEPRIVTAQDIETSENIPEAFRTIVVARTVCNWSAKDKSA--AVQVANPSKRHVHIARDTILGYISPVKSVADKTVSAVN---SDQTTFRHKRDELKRAMKKAFTSTTLTPHQCSQVLDLCAKYRNVFSLSPKELGKCTIAKADFPLEPGTKPVDRAPYRTNPRAQEVIDKCVEQMEDEEI 194

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BLAST of mRNA_H-paniculata_contig5054.12320.1 vs. uniprot
Match: A0A6H5KKE6_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKE6_9PHAE)

HSP 1 Score: 144 bits (362), Expect = 5.510e-32
Identity = 89/199 (44.72%), Postives = 117/199 (58.79%), Query Frame = 1

Query: 1708 IAVRVATDIASDQIESACIEPLTVNSEPIHHNPNHKYIWRQRVLARTVSHWEPNSTHGTIVVQLANPSNSGVTISAKTGLGHIAPVTVVPPSVVSTVAITAEDKTTVR---DELADVLKNTFSNTTFDKEQWSRVPDLCANHRSVFTLSPNELGTYTLAKAEFPSQPGTKPVDKPAYRANPRTQRVIHQCVDNMKAQGI 2295
            +AV V T  A      A +EP  V ++ I  + N    +R  V+ARTV +W          VQ+ANPS   V I+  T LG+I+PV  V    VS V     D+TT R   DEL   +K  F+NTTF  +Q S+V DLCA +R+VF+LSP ELG   +AKA+FP +PGTKPVD+  YR NPR Q VI +CV+ M+ + I
Sbjct:    1 MAVDVVTKHAPQANTPALVEPRIVTAQDIETSENIPEAFRTIVVARTVCNWSAKDKSA--AVQVANPSKRHVHIARDTILGYISPVKSVADKTVSAVN---SDQTTFRHKRDELKRAMKKAFTNTTFTPQQCSQVLDLCAKYRNVFSLSPKELGKCRIAKADFPLEPGTKPVDRAPYRTNPRAQEVIDKCVEQMEDEEI 194

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BLAST of mRNA_H-paniculata_contig5054.12320.1 vs. uniprot
Match: A0A6H5JXY7_9PHAE (RT_RNaseH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXY7_9PHAE)

HSP 1 Score: 121 bits (303), Expect = 1.250e-24
Identity = 73/195 (37.44%), Postives = 109/195 (55.90%), Query Frame = 1

Query: 1726 TDIASDQIESACIEPLTVNSEPIHHNPNHKYIWRQRVLARTVSHWEPNSTHGTIVVQLANPSNSGVTISAKTGLGHIAPVTVVPP-----SVVSTVAITAEDKTTVRDELADVLKNTFSNTTFDKEQWSRVPDLCANHRSVFTLSPNELGTYTLAKAEFPSQPGTKPVDKPAYRANPRTQRVIHQCVDNMKAQGI 2295
            TD    +  +  +EP  V  + + H+      ++  V+ART++ W  +++ G++VVQ+ANPS  GV +     LG ++ VT+  P     + V+   +T ++    + EL + L   F NTT   EQ   V DLCA +R VF+LS +ELG  T+A+A FP  PGT+PVD+P YR NPR   V  +CV  M   GI
Sbjct:   10 TDCRPPEDCTVVVEPRIVAEQDLVHDETLISPFQNIVVARTLATW--HASDGSVVVQIANPSADGVRLYDGLCLGQLSTVTITEPDQLHVNSVANTPVTDDEIRHAKSELEEPLSKAFDNTTLTNEQQQAVLDLCAKYRPVFSLSMSELGRCTIAEATFPVPPGTRPVDRPPYRPNPRVATVSDKCVAEMLEWGI 202

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BLAST of mRNA_H-paniculata_contig5054.12320.1 vs. uniprot
Match: A0A6H5JGV3_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGV3_9PHAE)

HSP 1 Score: 119 bits (299), Expect = 1.790e-24
Identity = 73/195 (37.44%), Postives = 110/195 (56.41%), Query Frame = 1

Query: 1726 TDIASDQIESACIEPLTVNSEPIHHNPNHKYIWRQRVLARTVSHWEPNSTHGTIVVQLANPSNSGVTISAKTGLGHIAPVTVVPP-----SVVSTVAITAEDKTTVRDELADVLKNTFSNTTFDKEQWSRVPDLCANHRSVFTLSPNELGTYTLAKAEFPSQPGTKPVDKPAYRANPRTQRVIHQCVDNMKAQGI 2295
            TD    +  +  +EP  V+ + + H+      ++  V+ART++ W  +++ G++VVQ+ANPS  GV +     LG ++ VT+  P     + V+   +T ++    + EL + L   F NTT   EQ   V DLCA +R VF+LS +ELG  T+A+A FP  PGT+PVD+P YR NPR   V  +CV  M   GI
Sbjct:   10 TDCRPPEDCTVVVEPRIVSEQDLVHDETLS-PFQNIVVARTLATW--HASDGSVVVQIANPSADGVRLYDGLCLGQLSTVTITEPDQLHVNSVANTPVTDDEIRHAKSELEEPLSKAFDNTTLTNEQQQAVLDLCAKYRPVFSLSMSELGRCTIAEATFPVPPGTRPVDRPPYRPNPRVATVSDKCVAEMLEWGI 201

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BLAST of mRNA_H-paniculata_contig5054.12320.1 vs. uniprot
Match: A0A6H5K112_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K112_9PHAE)

HSP 1 Score: 119 bits (299), Expect = 5.930e-24
Identity = 73/195 (37.44%), Postives = 110/195 (56.41%), Query Frame = 1

Query: 1726 TDIASDQIESACIEPLTVNSEPIHHNPNHKYIWRQRVLARTVSHWEPNSTHGTIVVQLANPSNSGVTISAKTGLGHIAPVTVVPP-----SVVSTVAITAEDKTTVRDELADVLKNTFSNTTFDKEQWSRVPDLCANHRSVFTLSPNELGTYTLAKAEFPSQPGTKPVDKPAYRANPRTQRVIHQCVDNMKAQGI 2295
            TD    +  +  +EP  V+ + + H+      ++  V+ART++ W  +++ G++VVQ+ANPS  GV +     LG ++ VT+  P     + V+   +T ++    + EL + L   F NTT   EQ   V DLCA +R VF+LS +ELG  T+A+A FP  PGT+PVD+P YR NPR   V  +CV  M   GI
Sbjct:   10 TDCRPPEDCTVVVEPRIVSEQDLVHDETLS-PFQNIVVARTLATW--HASDGSVVVQIANPSADGVRLYDGLCLGQLSTVTITEPDQLHVNSVANTPVTDDEIRHAKSELEEPLSKAFDNTTLTNEQQQAVLDLCAKYRPVFSLSMSELGRCTIAEATFPVPPGTRPVDRPPYRPNPRVATVSDKCVAEMLEWGI 201

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BLAST of mRNA_H-paniculata_contig5054.12320.1 vs. uniprot
Match: A0A6H5KCT5_9PHAE (Reverse transcriptase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCT5_9PHAE)

HSP 1 Score: 92.0 bits (227), Expect = 5.080e-16
Identity = 45/92 (48.91%), Postives = 60/92 (65.22%), Query Frame = 1

Query: 2005 TAEDKTTVRDELADVLKNTFSNTTFDKEQWSRVPDLCANHRSVFTLSPNELGTYTLAKAEFPSQPGTKPVDKPAYRANPRTQRVIHQCVDNM 2280
            TA +    + EL + L   F+N+TF KEQ +R+ DLCA +R VF+L+  ELG  T A+A FP  P TKPV++  YRANP T+ VI  CV +M
Sbjct:   18 TASEIAAAKAELVEPLSKAFANSTFTKEQQTRILDLCAKYRPVFSLNRKELGKCTTAQATFPMPPNTKPVNRRPYRANPHTEAVIQTCVKDM 109

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BLAST of mRNA_H-paniculata_contig5054.12320.1 vs. uniprot
Match: A0A6H5K563_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K563_9PHAE)

HSP 1 Score: 85.9 bits (211), Expect = 3.390e-15
Identity = 43/92 (46.74%), Postives = 58/92 (63.04%), Query Frame = 1

Query: 2005 TAEDKTTVRDELADVLKNTFSNTTFDKEQWSRVPDLCANHRSVFTLSPNELGTYTLAKAEFPSQPGTKPVDKPAYRANPRTQRVIHQCVDNM 2280
            TA +    + EL + L   F+N+TF KEQ +R+ DLCA +R VF+L+  ELG    A+A FP  P TK V++  YRANP T+ VI  CV +M
Sbjct:   39 TASEIAAAKAELVEPLSKAFANSTFTKEQQTRILDLCAKYRPVFSLNRKELGKCKTAQATFPMPPNTKLVNRRPYRANPHTEAVIQTCVKDM 130

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BLAST of mRNA_H-paniculata_contig5054.12320.1 vs. uniprot
Match: A0A6H5K0N6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0N6_9PHAE)

HSP 1 Score: 89.0 bits (219), Expect = 5.440e-15
Identity = 44/92 (47.83%), Postives = 58/92 (63.04%), Query Frame = 1

Query: 2005 TAEDKTTVRDELADVLKNTFSNTTFDKEQWSRVPDLCANHRSVFTLSPNELGTYTLAKAEFPSQPGTKPVDKPAYRANPRTQRVIHQCVDNM 2280
            TA +    + EL + L   F+N+TF KEQ +R+ DLCA +R VF+L+  ELG  T A+A  P  P TKPV+   YRANP T+ VI  CV +M
Sbjct:  217 TASEIAAAKAELVEPLSKAFANSTFTKEQQTRILDLCAKYRPVFSLNRKELGKCTTAQARLPMPPNTKPVNHRPYRANPHTEAVIQTCVKDM 308

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BLAST of mRNA_H-paniculata_contig5054.12320.1 vs. uniprot
Match: A0A6H5K153_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K153_9PHAE)

HSP 1 Score: 85.9 bits (211), Expect = 1.290e-13
Identity = 44/92 (47.83%), Postives = 57/92 (61.96%), Query Frame = 1

Query: 2005 TAEDKTTVRDELADVLKNTFSNTTFDKEQWSRVPDLCANHRSVFTLSPNELGTYTLAKAEFPSQPGTKPVDKPAYRANPRTQRVIHQCVDNM 2280
            TA +    + EL   L   F+N TF KEQ +R+ DL A +R VF+L+  ELG  T A+A FP  P TKPV++  YRANP T+ VI  CV +M
Sbjct:   41 TASEIAAAKAELGKPLSKAFANFTFTKEQQTRILDLSAKYRPVFSLNRKELGKCTTAQATFPMPPNTKPVNRRPYRANPHTEAVIQTCVKDM 132

[Close]

BLAST of mRNA_H-paniculata_contig5054.12320.1 vs. uniprot
Match: A0A6H5K3U6_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3U6_9PHAE)

HSP 1 Score: 62.0 bits (149), Expect = 3.430e-6
Identity = 28/49 (57.14%), Postives = 36/49 (73.47%), Query Frame = 1

Query: 2149 NELGTYTLAKAEFPSQPGTKPVDKPAYRANPRTQRVIHQCVDNMKAQGI 2295
            +ELG  T+A+A FP  PGT+PVD+P YR NPRT  VI +CV++M   GI
Sbjct:    2 SELGRCTIAEATFPVPPGTRPVDRPPYRPNPRTSAVIDKCVEDMLEWGI 50

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig5054.12320.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig5054.12320.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 11


Match Name	E-value	Identity	Description
A0A6H5L1A0_9PHAE	4.430e-33	44.22	Reverse transcriptase domain-containing protein n=...	[more]
A0A6H5KKE6_9PHAE	5.510e-32	44.72	Reverse transcriptase domain-containing protein n=...	[more]
A0A6H5JXY7_9PHAE	1.250e-24	37.44	RT_RNaseH domain-containing protein n=1 Tax=Ectoca...	[more]
A0A6H5JGV3_9PHAE	1.790e-24	37.44	Reverse transcriptase domain-containing protein n=...	[more]
A0A6H5K112_9PHAE	5.930e-24	37.44	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KCT5_9PHAE	5.080e-16	48.91	Reverse transcriptase domain-containing protein n=...	[more]
A0A6H5K563_9PHAE	3.390e-15	46.74	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5K0N6_9PHAE	5.440e-15	47.83	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5K153_9PHAE	1.290e-13	47.83	Reverse transcriptase domain-containing protein n=...	[more]
A0A6H5K3U6_9PHAE	3.430e-6	57.14	Reverse transcriptase domain-containing protein n=...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig5054	contig	H-paniculata_contig5054:5389..7683 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Properties


Property Name	Value
Hectar predicted targeting category	other localisation
Exons	1
Model size	2296
Cds size	774
Stop	0
Start	1

Relationships

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622930484.6160693-UTR-H-paniculata_contig5054:5388..6909	1622930484.6160693-UTR-H-paniculata_contig5054:5388..6909	Halopteris paniculata Hal_grac_a_UBK monoicous	UTR	H-paniculata_contig5054 5389..6909 +
1691481312.9362156-UTR-H-paniculata_contig5054:5388..6909	1691481312.9362156-UTR-H-paniculata_contig5054:5388..6909	Halopteris paniculata Hal_grac_a_UBK monoicous	UTR	H-paniculata_contig5054 5389..6909 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622930484.629757-CDS-H-paniculata_contig5054:6909..7683	1622930484.629757-CDS-H-paniculata_contig5054:6909..7683	Halopteris paniculata Hal_grac_a_UBK monoicous	CDS	H-paniculata_contig5054 6910..7683 +
1691481312.9455247-CDS-H-paniculata_contig5054:6909..7683	1691481312.9455247-CDS-H-paniculata_contig5054:6909..7683	Halopteris paniculata Hal_grac_a_UBK monoicous	CDS	H-paniculata_contig5054 6910..7683 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig5054.12320.1	prot_H-paniculata_contig5054.12320.1	Halopteris paniculata Hal_grac_a_UBK monoicous	polypeptide	H-paniculata_contig5054 6910..7683 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at H-paniculata_contig5054:5389..7683+
coding sequence from alignment at H-paniculata_contig5054:5389..7683+

protein sequence of mRNA_H-paniculata_contig5054.12320.1

>prot_H-paniculata_contig5054.12320.1 ID=prot_H-paniculata_contig5054.12320.1|Name=mRNA_H-paniculata_contig5054.12320.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=258bp
MLLDNSILNAFRATLDWDKLTMSFGDSQVPIPAIHPKSANRASNMHTPVY
LPRKCNIPAGHEIAVRVATDIASDQIESACIEPLTVNSEPIHHNPNHKYI
WRQRVLARTVSHWEPNSTHGTIVVQLANPSNSGVTISAKTGLGHIAPVTV
VPPSVVSTVAITAEDKTTVRDELADVLKNTFSNTTFDKEQWSRVPDLCAN
HRSVFTLSPNELGTYTLAKAEFPSQPGTKPVDKPAYRANPRTQRVIHQCV
DNMKAQGI

mRNA from alignment at H-paniculata_contig5054:5389..7683+

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_H-paniculata_contig5054.12320.1 ID=mRNA_H-paniculata_contig5054.12320.1|Name=mRNA_H-paniculata_contig5054.12320.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2295bp|location=Sequence derived from alignment at H-paniculata_contig5054:5389..7683+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GCGCCCAGTAACGCCGATATACCGTATTACATGCTTGAAGACTTTAGGCG
TGCGAAACGGATTGGCAAGCTGGATAACATGTCCCGGGGACTGGTTCACT
GGGTCGAGGGCGGGTTGAAGGCCTGCATTATGAAGGACGAATACCCCCCC
GGCGAGCTGGCAAGGCGGTCCAACAGGTCACAGGAGGTCGCGGCCTGGGG
ACGAAAGTGACTCAGGTGAACACGGGATCGAGCAGTAACGCGCCGCATGG
TATCAGCAGCAACGGTAACCCGCAATTCCCCATCCGTCATCCAGCTTGCC
TCGCAACTCGCCCTTTCGTGTTTAGTGCCCAAGAGATCCCCGACGACCTT
CGGCTCATCTAAAACCCGACAGAAGATGTAGATGACCCCATGACTCAATT
TCACATGCGCGTCCGCCCTGCATTACCTGACAACACTGAAACCGCCGAGC
TCGATCGATGAGCAGTACACTATTTGCCTCTTTTAGTTCATGGCGCGGCC
CGCACCAGTTACGGTCAGTTAAACCGAGCGACCCTTGAGTGGCGTTTGCC
GCCCTGCCTGCATGAATTACGCCAGAAAAAAGCTCCCATGACGGGGTGGA
AGCATTCACCAACTTGTTCGCTCCCGCCAACTTGCTTGCCCTCCTCGCCC
AACAAGTGATGGCGATCAAACAGACACCCAGCCAGCACGTAGACCATTAC
TCTTTGGCCGTCACGAGTTTGTTTTCCCGCTTGCTAGACGAGGCCCAACG
GGCCGCACCTGTGAACGACAACTCTGAAGCTTTCGCCTGTGAAAAGTTGA
AAATAGCGGTGTTTGAGCATGACCTGCTGCCGGCAATCAGAGTAGAGCAG
ATCCGCGAGGACCCAGCACGTTCATTTGCAGATGGAAGGGACCCAGCGAA
GAAACACTCCTCCAACAACATGCACGGTAACCCCACAGTCAGTTCACATA
TCCATCGTTACCATGACCCCACAGTCGACCCCTCAGATGATAGCAGAGGT
CTCAACGCTGCAAATGCAGATGATTGACTTGGTCACCGCAGTCAACCCCC
GCCCAGTTTCTGCAGTAGCGGTCGATGGTATCCCGCAACTTCCGGGAACG
CTGGTGGTCGAGCTCCCGCAACCACACCAACTCGTCGGGAGTCCGCGCCA
ATAGCGGCACCACCCCGACTGGACGCCATCAGCACCAGCACAGCAGAAGC
AGGAGACTTATCAGTGGCAGGGTTGTAGGCGGCCCCATACTCACCCGACC
AAGAAGTGCTGCTCGTTCATTAACTTTGTCAATGAGCATAAGCTCTGACG
GGACCTTGGACGACTTTCCTCCGGTCGCCTAGGGAAGATTAGCGTAAGCA
GTACTATATTTCAAGGTCAAGATGAGTCACAAGTGATTGCAAGTAACCTC
ACTCACATAGTATTACCTCTAGTAAGGGCGCACAACTTTGCGGGTGTTAG
TATTGCAGCGAGTGGGTTTGTAGACCTTGTCCGTTGAGAGCATCATCTTG
CCTAATTTAGGCCCGGATAAGATGTTGCTAGACAACAGCATCCTGAACGC
ATTTCGAGCTACGTTGGACTGGGACAAACTGACCATGTCTTTCGGTGATA
GCCAAGTCCCTATTCCTGCGATTCATCCAAAATCGGCGAATCGGGCATCT
AACATGCACACGCCAGTGTATCTGCCAAGAAAATGCAATATTCCCGCAGG
ACATGAAATAGCCGTACGCGTCGCTACAGATATTGCCTCGGATCAGATAG
AATCTGCATGTATTGAACCACTGACGGTAAACTCAGAACCGATTCACCAC
AACCCGAACCATAAATACATTTGGAGACAGAGAGTACTTGCTCGGACGGT
TAGCCATTGGGAGCCAAACAGTACACACGGTACCATCGTCGTTCAACTCG
CCAATCCGTCTAACAGTGGCGTTACAATTTCGGCCAAAACCGGTCTAGGC
CACATTGCACCAGTAACCGTCGTTCCTCCGTCAGTCGTCAGCACAGTAGC
AATTACCGCGGAGGATAAGACTACTGTACGTGACGAATTAGCTGATGTGC
TCAAGAACACTTTTTCTAACACCACGTTTGACAAGGAACAATGGTCGCGA
GTTCCAGACCTGTGTGCCAATCATCGATCCGTATTTACGCTTTCGCCTAA
TGAGTTAGGGACGTACACCCTGGCGAAGGCCGAATTTCCTTCGCAACCAG
GCACCAAACCAGTAGACAAGCCAGCATACCGTGCAAATCCCCGAACCCAA
AGAGTAATCCATCAATGTGTCGATAACATGAAAGCACAGGGGATT

Coding sequence (CDS) from alignment at H-paniculata_contig5054:5389..7683+

>mRNA_H-paniculata_contig5054.12320.1 ID=mRNA_H-paniculata_contig5054.12320.1|Name=mRNA_H-paniculata_contig5054.12320.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1548bp|location=Sequence derived from alignment at H-paniculata_contig5054:5389..7683+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTTGCTAGACAACAGCATCCTGAACGCATTTCGAGCTACGTTGGACTG
GGACAAACTGACCATGTCTTTCGGTGATAGCCAAGTCCCTATTCCTGCGA
TTCATCCAAAATCGGCGAATCGGGCATCTAACATGCACACGCCAGTGTAT
CTGCCAAGAAAATGCAATATTCCCGCAGGACATGAAATAGCCGTACGCGT
CGCTACAGATATTGCCTCGGATCAGATAGAATCTGCATGTATTGAACCAC
TGACGGTAAACTCAGAACCGATTCACCACAACCCGAACCATAAATACATT
TGGAGACAGAGAGTACTTGCTCGGACGGTTAGCCATTGGGAGCCAAACAG
TACACACGGTACCATCGTCGTTCAACTCGCCAATCCGTCTAACAGTGGCG
TTACAATTTCGGCCAAAACCGGTCTAGGCCACATTGCACCAGTAACCGTC
GTTCCTCCGTCAGTCGTCAGCACAGTAGCAATTACCGCGGAGGATAAGAC
TACTGTACGTGACGAATTAGCTGATGTGCTCAAGAACACTTTTTCTAACA
CCACGTTTGACAAGGAACAATGGTCGCGAGTTCCAGACCTGTGTGCCAAT
CATCGATCCGTATTTACGCTTTCGCCTAATGAGTTAGGGACGTACACCCT
GGCGAAGGCCGAATTTCCTTCGCAACCAGGCACCAAACCAGTAGACAAGC
CAGCATACCGTGCAAATCCCCGAACCCAAAGAGTAATCCATCAATGTGTC
GATAACATGAAAGCACAGGGGATTATGTTGCTAGACAACAGCATCCTGAA
CGCATTTCGAGCTACGTTGGACTGGGACAAACTGACCATGTCTTTCGGTG
ATAGCCAAGTCCCTATTCCTGCGATTCATCCAAAATCGGCGAATCGGGCA
TCTAACATGCACACGCCAGTGTATCTGCCAAGAAAATGCAATATTCCCGC
AGGACATGAAATAGCCGTACGCGTCGCTACAGATATTGCCTCGGATCAGA
TAGAATCTGCATGTATTGAACCACTGACGGTAAACTCAGAACCGATTCAC
CACAACCCGAACCATAAATACATTTGGAGACAGAGAGTACTTGCTCGGAC
GGTTAGCCATTGGGAGCCAAACAGTACACACGGTACCATCGTCGTTCAAC
TCGCCAATCCGTCTAACAGTGGCGTTACAATTTCGGCCAAAACCGGTCTA
GGCCACATTGCACCAGTAACCGTCGTTCCTCCGTCAGTCGTCAGCACAGT
AGCAATTACCGCGGAGGATAAGACTACTGTACGTGACGAATTAGCTGATG
TGCTCAAGAACACTTTTTCTAACACCACGTTTGACAAGGAACAATGGTCG
CGAGTTCCAGACCTGTGTGCCAATCATCGATCCGTATTTACGCTTTCGCC
TAATGAGTTAGGGACGTACACCCTGGCGAAGGCCGAATTTCCTTCGCAAC
CAGGCACCAAACCAGTAGACAAGCCAGCATACCGTGCAAATCCCCGAACC
CAAAGAGTAATCCATCAATGTGTCGATAACATGAAAGCACAGGGGATT