prot_H-paniculata_contig5048.12310.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5048.12310.1
Unique Nameprot_H-paniculata_contig5048.12310.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length258
Homology
BLAST of mRNA_H-paniculata_contig5048.12310.1 vs. uniprot
Match: D8LBG3_ECTSI (2-keto-3-deoxy-6-phosphogluconate aldolase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBG3_ECTSI)

HSP 1 Score: 183 bits (464), Expect = 1.910e-53
Identity = 107/238 (44.96%), Postives = 150/238 (63.03%), Query Frame = 0
Query:   21 HVVRCFVARVKQPCRPSGKHDLWTRILETSWPL----AVLRDLDVERGEEIASTLYAADFRMVSVTVDTKGFEKIVRECCDLQLPGMVIGVSSVTSAEQVDTAFECGAEFISSTCLDLAVVRRTKELGMLSIPGVSTESQATEAVAAGGDILKVFPANKISPATTQRIVNV--SYDTPVIVAGGVEVVDLKSFSSAGVAGFAVGRTLFTPDMTSSGLKVKAERFMRAARTLSWAQLNR 252
            HV RC  AR+   CR +   +L ++  E +  L    AVLRD+ +ER  E+   LY   F M+SVT DTK F KI+R       P +++G SSVT+ ++VD AF C   F+SST  D A+V+RT++LGM+SIPGVST +QA  AV AGG ILKV+PA  +SP   + IVN   + + PV+++GGVE   L+++  +G +GFAVGRTLF P+ +S+ +  +A  F+     LSW Q  R
Sbjct:   32 HVSRCQAARLS--CRET---ELRSKPREDALSLPISIAVLRDVQLERAVEVVRALYEEGFNMISVTADTKNFSKILRSIPRSFFPDLLLGASSVTTLDEVDVAFACAVNFVSSTSCDPAIVKRTRDLGMVSIPGVSTPAQAASAVQAGGGILKVYPATNVSPNQCRDIVNAIKTSNIPVVISGGVEPDQLQAYVKSGASGFAVGRTLFEPEKSSAEIADRARCFL-----LSWPQKRR 259          
BLAST of mRNA_H-paniculata_contig5048.12310.1 vs. uniprot
Match: UPI001C669F04 (2-dehydro-3-deoxy-6-phosphogalactonate aldolase n=1 Tax=Sneathiella aquimaris TaxID=2599305 RepID=UPI001C669F04)

HSP 1 Score: 106 bits (264), Expect = 2.500e-24
Identity = 65/194 (33.51%), Postives = 101/194 (52.06%), Query Frame = 0
Query:   53 LAVLRDLDVERGEEIASTLYAADFRMVSVTVDTKGFEKIVRECCDLQLPGMVIGVSSVTSAEQVDTAFECGAEFISSTCLDLAVVRRTKELGMLSIPGVSTESQATEAVAAGGDILKVFPANKISPATTQRIVNV-SYDTPVIVAGGVEVVDLKSFSSAGVAGFAVGRTLFTPDMTSSGLKVKAERFMRAARTL 245
            +A+LR +       ++  L  +  R++ VT+++  + K +          +++G  +V S + VD     G + I S  +++ V++RTKELGMLS PG  T S+   A+ AG DILK+FPA+ + PA  + I  V    TP+   GGV V  ++SF  AGV    VG  L+ P  T + +   A  F    RTL
Sbjct:   15 IAILRGITPTEAGPVSDELVQSGIRLIEVTLNSPDWSKSLEIINSRHGDDIILGAGTVLSPDDVDRVQALGGQIIISPNMNVEVIKRTKELGMLSAPGCYTPSECFTALEAGADILKIFPADTLGPAFIKAIAAVLPKGTPICPTGGVSVDTMQSFLDAGVYAMGVGSALYKPGKTVAEIAASAAVFCDKYRTL 208          
BLAST of mRNA_H-paniculata_contig5048.12310.1 vs. uniprot
Match: UPI001B151FE4 (2-dehydro-3-deoxy-6-phosphogalactonate aldolase n=1 Tax=Sphingobium sp. TaxID=1912891 RepID=UPI001B151FE4)

HSP 1 Score: 104 bits (260), Expect = 7.980e-24
Identity = 66/196 (33.67%), Postives = 103/196 (52.55%), Query Frame = 0
Query:   53 LAVLRDLDVERGEEIASTLYAADFRMVSVTVDTKGFEKIVRECCDLQLPGMVIGVSSVTSAEQVDTAFECGAEFISSTCLDLAVVRRTKELGMLSIPGVSTESQATEAVAAGGDILKVFPANKISPATTQRIVNV-SYDTPVIVAGGVEVVDLKSFSSAGVAGFAVGRTLFTPDMTSSGLKVKAERFMRAARTLSW 247
            +A+LR L  E    +  TL  A  R + V +++    + +    D     ++IG  +V S   VD+  + G   I S  ++  V+RRTKELG+LS+PG++T S+A  A+ AG D LK+FPA   +PA  + +  V   D PV   GG+   +L ++  AG  GF +G  LF P +  + L  +A+     A T +W
Sbjct:   14 VAILRGLAPEDAPSVGETLVGAGLRCIEVPLNSPRPLESIAALADAAHESVLIGAGTVLSPADVDSVAQAGGRIIVSPNMNPRVIRRTKELGLLSLPGIATPSEAFAAIEAGADGLKLFPAEMHNPAVLKAMKAVLPSDIPVFAVGGIGPDNLTAWRRAGADGFGIGSALFRPGIALAELDERAK-----ALTAAW 204          
BLAST of mRNA_H-paniculata_contig5048.12310.1 vs. uniprot
Match: A0A512DJU2_9PROT (2-dehydro-3-deoxy-6-phosphogalactonate aldolase n=1 Tax=Skermanella aerolata TaxID=393310 RepID=A0A512DJU2_9PROT)

HSP 1 Score: 103 bits (258), Expect = 1.900e-23
Identity = 63/199 (31.66%), Postives = 103/199 (51.76%), Query Frame = 0
Query:   53 LAVLRDLDVERGEEIASTLYAADFRMVSVTVDTKGFEKIVRECCDLQLPGMVIGVSSVTSAEQVDTAFECGAEFISSTCLDLAVVRRTKELGMLSIPGVSTESQATEAVAAGGDILKVFPANKISPATTQRIVNV-SYDTPVIVAGGVEVVDLKSFSSAGVAGFAVGRTLFTPDMTSSGLKVKAERFMRAARTLSWAQL 250
            +A+LR L     E+ A  LY   FR++ V +++      +     L     ++G  +V + EQV    + GAE +     D  ++R  K  GM+S+PG++T ++A  A+ AG D LK+FPA  I P   + +  V   D  ++  GG+    +  +  AGVAGF +G  L+TP MT + +  +A RF+ A     W++L
Sbjct:   20 VAILRGLTPTEAEDTAQALYERGFRLIEVPLNSPQPFDSIASIRKLLPADALVGAGTVMTVEQVSRLSDLGAELVVMPHADAEIIRAAKARGMVSLPGITTPTEAFSALKAGADALKLFPAELIGPKIVKAMRAVLPPDVRLLPVGGISPDTMTDYHDAGVAGFGLGSALYTPGMTVAEVAERANRFVTA-----WSRL 213          
BLAST of mRNA_H-paniculata_contig5048.12310.1 vs. uniprot
Match: UPI001A939860 (2-dehydro-3-deoxy-6-phosphogalactonate aldolase n=1 Tax=unclassified Jiella TaxID=2643868 RepID=UPI001A939860)

HSP 1 Score: 102 bits (254), Expect = 6.640e-23
Identity = 63/200 (31.50%), Postives = 104/200 (52.00%), Query Frame = 0
Query:   49 TSWP------LAVLRDLDVERGEEIASTLYAADFRMVSVTVDTKGFEKIVRECCDLQLPGMVIGVSSVTSAEQVDTAFECGAEFISSTCLDLAVVRRTKELGMLSIPGVSTESQATEAVAAGGDILKVFPANKISPATTQRIVNV-SYDTPVIVAGGVEVVDLKSFSSAGVAGFAVGRTLFTPDMTSSGLKVKAERFMRA 241
            T WP      +A+LR L  +  E I + L  A F  + + +++      +     L   G++IG  +V  A  VD   +CG E + S  +D AV+RR +E G++++PGV T ++A  A + G   LK FPA+ + P+    I  V     P+   GGV   D  ++ +AG+  F +G +L+ P   ++ +K +AER +RA
Sbjct:    5 TPWPKLKRDLVAILRGLRPQTCEAIVAVLIEAGFEAIEIPLNSPEPFLSIERASMLAPDGVLIGAGTVLDAASVDRLADCGGELLVSPNVDAAVLRRAREQGLVTMPGVFTATEALAAASLGASALKFFPASVLGPSGITAIRAVLPAGLPIGAVGGVSEADFAAYGAAGIRHFGLGSSLYKPGDDAATVKARAERTIRA 204          
BLAST of mRNA_H-paniculata_contig5048.12310.1 vs. uniprot
Match: A0A520H4I0_9BURK (2-dehydro-3-deoxy-6-phosphogalactonate aldolase n=1 Tax=Variovorax sp. TaxID=1871043 RepID=A0A520H4I0_9BURK)

HSP 1 Score: 102 bits (254), Expect = 6.960e-23
Identity = 69/209 (33.01%), Postives = 107/209 (51.20%), Query Frame = 0
Query:   37 SGKHDLWTRILETSWPLAVLRDLDVERGEEIASTLYAADFRMVSVTV---DTKGFEKIVRECCDLQLPGMVIGVSSVTSAEQVDTAFECGAEFISSTCLDLAVVRRTKELGMLSIPGVSTESQATEAVAAGGDILKVFPANKISPATTQRIVNV-SYDTPVIVAGGVEVVDLKSFSSAGVAGFAVGRTLFTPDMTSSGLKVKAERFMRA 241
            S  HD +   L     +A+LR L       I   L  A FR++ V +   D      ++R  C     G ++G  +V +A QV    + G E I S   D AVV  TK LG++S+PGV+T S+A  A+AAG + LK+FPA   SPA  +  + V    TP++  GG+   ++ ++ +AG  GF +G  L+ P  +++ +   A  F+ A
Sbjct:    3 STPHDTFEAALRQIPLVAILRGLTPAEAPAIGDALVEAGFRLLEVPLNSPDPLASIALLRARC----AGALVGAGTVLTARQVGEVRDAGGELIVSPNFDAAVVAETKRLGLVSLPGVATPSEAFGALAAGANGLKLFPAEAASPAVVKAWLAVLPRGTPLMPVGGIAPRNMDAWRAAGATGFGIGSALYKPGKSAAAVAEDARAFVAA 207          
BLAST of mRNA_H-paniculata_contig5048.12310.1 vs. uniprot
Match: A0A089YMG6_9PSED (2-dehydro-3-deoxy-6-phosphogalactonate aldolase n=14 Tax=Pseudomonadaceae TaxID=135621 RepID=A0A089YMG6_9PSED)

HSP 1 Score: 101 bits (251), Expect = 1.620e-22
Identity = 64/194 (32.99%), Postives = 103/194 (53.09%), Query Frame = 0
Query:   53 LAVLRDLDVERGEEIASTLYAADFRMVSVTVDTKGFEKIVRECCDLQLPGMVIGVSSVTSAEQVDTAFECGAEFISSTCLDLAVVRRTKELGMLSIPGVSTESQATEAVAAGGDILKVFPANKISPATTQRIVNV-SYDTPVIVAGGVEVVDLKSFSSAGVAGFAVGRTLFTPDMTSSGLKVKAERFMRAARTL 245
            +A+LR L  E    I   LY A FR++ V +++      +R   +      +IG  +V SAE V      G + I     D AV++  KE G+   PGV T ++A  A+ AG D+LK+FPA  ++PA  + ++ V    T ++  GG+   ++ +F  AGVAGF +G  LF P MT   +   A+ +++A ++L
Sbjct:   12 IAILRGLRPEESVAIGEVLYDAGFRIIEVPLNSPQPYDSIRLLRNTLPADCLIGAGTVLSAEHVQQVKAAGGQLIVMPHSDPAVLKAAKEAGLYLAPGVVTPTEAFAALVAGADVLKLFPAESLTPAVVKALLAVLPKGTALVPVGGISPDNMHAFLDAGVAGFGLGSGLFKPGMTVQQVADNAKAYVQAWQSL 205          
BLAST of mRNA_H-paniculata_contig5048.12310.1 vs. uniprot
Match: UPI001663D713 (bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase n=1 Tax=Parapedobacter pyrenivorans TaxID=1305674 RepID=UPI001663D713)

HSP 1 Score: 101 bits (251), Expect = 1.620e-22
Identity = 56/169 (33.14%), Postives = 92/169 (54.44%), Query Frame = 0
Query:   53 LAVLRDLDVERGEEIASTLYAADFRMVSVTVDTKGFEKIVRECCDLQLPGMVIGVSSVTSAEQVDTAFECGAEFISSTCLDLAVVRRTKELGMLSIPGVSTESQATEAVAAGGDILKVFPANKISPATTQRIVNVSYDTPVIVAGGVEVVDLKSFSSAGVAGFAVGRTL 221
            +A++R L+   G  +A  LYA   R++ +T+++     ++R+  D     MV+G  +V  A+  + A   GA F+ S  + + V+R+ K+LG++SIPG  T ++   A   G DI+KVFPA   SPA  + I       P++  GG+   ++K F  AG  GF +G  L
Sbjct:   13 VAIIRGLNPSYGVAVAEALYAGGIRILEITMNSDEPLSVIRQITDRFGDRMVVGAGTVLDADMAEVAVAAGARFVLSPIVAVEVIRKAKDLGVVSIPGAYTATEIYTAYKNGADIVKVFPAT--SPAYIRDIAGPLPQIPLLPTGGITPQNIKDFKHAGAVGFGIGSAL 179          
BLAST of mRNA_H-paniculata_contig5048.12310.1 vs. uniprot
Match: UPI001E4097A3 (2-dehydro-3-deoxy-6-phosphogalactonate aldolase n=3 Tax=Shewanella TaxID=22 RepID=UPI001E4097A3)

HSP 1 Score: 100 bits (250), Expect = 2.220e-22
Identity = 57/194 (29.38%), Postives = 101/194 (52.06%), Query Frame = 0
Query:   53 LAVLRDLDVERGEEIASTLYAADFRMVSVTVDTKGFEKIVRECCDLQLPGMVIGVSSVTSAEQVDTAFECGAEFISSTCLDLAVVRRTKELGMLSIPGVSTESQATEAVAAGGDILKVFPANKISPATTQRIVNVS-YDTPVIVAGGVEVVDLKSFSSAGVAGFAVGRTLFTPDMTSSGLKVKAERFMRAARTL 245
            +A+LR +  E   E+   L    F M+ V +++    + +R   +      +IG  +V + EQ +     G + I S  ++ AV++RTKEL M+S PGV+T ++   A+ AG D  K FPA+ I P+T +   +V+    P++  GG+   ++  + SAG  GF +G  L+ P  T + ++  A+  ++    L
Sbjct:   13 IAILRGVTNEEVVEVTGALIEEGFTMIEVPLNSPNAVESIRRIVEAYGDKALIGAGTVLTVEQAEAVAAVGGKLIVSPNMNPAVIKRTKELDMISAPGVATPTELFAAIEAGADAAKAFPADAIPPSTIKAWTSVAPKGYPILAVGGIHAGNMADYLSAGAVGFGIGSNLYKPGKTVAEVRAVAKEMIQTISAL 206          
BLAST of mRNA_H-paniculata_contig5048.12310.1 vs. uniprot
Match: UPI0009907518 (2-dehydro-3-deoxy-6-phosphogalactonate aldolase n=2 Tax=Microbulbifer TaxID=48073 RepID=UPI0009907518)

HSP 1 Score: 100 bits (250), Expect = 2.440e-22
Identity = 60/196 (30.61%), Postives = 103/196 (52.55%), Query Frame = 0
Query:   44 TRILETSWPLAVLRDLDVERGEEIASTLYAADFRMVSVTVDTKGFEKIVRECCDLQLPGMVIGVSSVTSAEQVDTAFECGAEFISSTCLDLAVVRRTKELGMLSIPGVSTESQATEAVAAGGDILKVFPANKISPATTQRIVNVSYDTPVIVAGGVEVVDLKSFSSAGVAGFAVGRTLFTPDMTSSGLKVKAERFM 239
            TR LE    +A+LR +       IA T+  + FR++ V +++      ++   ++    +++G  +V + EQV    + G + I S   +  V+R TK LG++S+PG  T ++A  A AAG D LK+FPA  + P   +    V  D PV+  GGV   D+  + +AG +GF +G  L+   MT   ++  A+ ++
Sbjct:    7 TRYLEALPLVAILRGVQPTEVVAIADTIRESGFRIIEVPLNSPEPYASIQALAEVMGDEVLVGAGTVLTVEQVRAVADAGGKVIISPNTNEDVIRETKRLGLISMPGFCTPTEALAAAAAGADALKLFPATALGPEGFKVASAVFPDLPVLAVGGVSPQDMPEYLAAGFSGFGLGSGLYRAGMTVEQVRENADAYV 202          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5048.12310.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LBG3_ECTSI1.910e-5344.962-keto-3-deoxy-6-phosphogluconate aldolase n=2 Tax... [more]
UPI001C669F042.500e-2433.512-dehydro-3-deoxy-6-phosphogalactonate aldolase n=... [more]
UPI001B151FE47.980e-2433.672-dehydro-3-deoxy-6-phosphogalactonate aldolase n=... [more]
A0A512DJU2_9PROT1.900e-2331.662-dehydro-3-deoxy-6-phosphogalactonate aldolase n=... [more]
UPI001A9398606.640e-2331.502-dehydro-3-deoxy-6-phosphogalactonate aldolase n=... [more]
A0A520H4I0_9BURK6.960e-2333.012-dehydro-3-deoxy-6-phosphogalactonate aldolase n=... [more]
A0A089YMG6_9PSED1.620e-2232.992-dehydro-3-deoxy-6-phosphogalactonate aldolase n=... [more]
UPI001663D7131.620e-2233.14bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-d... [more]
UPI001E4097A32.220e-2229.382-dehydro-3-deoxy-6-phosphogalactonate aldolase n=... [more]
UPI00099075182.440e-2230.612-dehydro-3-deoxy-6-phosphogalactonate aldolase n=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013785Aldolase-type TIM barrelGENE3D3.20.20.70coord: 50..250
e-value: 4.1E-42
score: 145.7
IPR000887KDPG/KHG aldolasePFAMPF01081Aldolasecoord: 53..218
e-value: 1.2E-16
score: 60.7
IPR000887KDPG/KHG aldolasePANTHERPTHR302462-KETO-3-DEOXY-6-PHOSPHOGLUCONATE ALDOLASEcoord: 52..229
NoneNo IPR availablePANTHERPTHR30246:SF12-DEHYDRO-3-DEOXY-6-PHOSPHOGALACTONATE ALDOLASEcoord: 52..229
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..25
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..10
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 26..257
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 20..25
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 11..19
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..25
score: 0.836
NoneNo IPR availableSUPERFAMILY51569Aldolasecoord: 45..239

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5048contigH-paniculata_contig5048:9936..13731 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5048.12310.1mRNA_H-paniculata_contig5048.12310.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5048 9905..14032 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5048.12310.1 ID=prot_H-paniculata_contig5048.12310.1|Name=mRNA_H-paniculata_contig5048.12310.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=258bp
MILLTHWRGKLFLLYLALVPHVVRCFVARVKQPCRPSGKHDLWTRILETS
WPLAVLRDLDVERGEEIASTLYAADFRMVSVTVDTKGFEKIVRECCDLQL
PGMVIGVSSVTSAEQVDTAFECGAEFISSTCLDLAVVRRTKELGMLSIPG
VSTESQATEAVAAGGDILKVFPANKISPATTQRIVNVSYDTPVIVAGGVE
VVDLKSFSSAGVAGFAVGRTLFTPDMTSSGLKVKAERFMRAARTLSWAQL
NRQEARR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013785Aldolase_TIM
IPR000887Aldlse_KDPG_KHG